pycom13g26290

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
22981780 .. 22982320
541 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g26290.1

Sequence Viewer

Length: 459 bp
ATGCATTTCCACCCACATGCACTCCCATTCTTTAATCCATTCAGCCACAAGACATTATCATTGCACCACATTCAGCCATTCCATCTCCCATTTCAGATTGCATTCCAATCATTCCAACCAAATCACATGCACTCCCACCCTTTAAATCACATGCATTCCCTTCATAAATCAGCCACATGCACTCATAATCATTCAACCAACCTAGCTTCAGCCAACACATTCAAACATGCAGCCACATTCCCTCCTAGCTGTCATGTTCCCCCCATTTCACCTATAAATAAGCATGCATTACACACTCATTCATACACATTTCATTCACTCCTCCATTTCAGAAATTCATCCATTGTACATACCACAAACACTTCCCCCTTTTGTGCCGTGAGTTTCCCTATTAATCCAAACACCATCCTTCCATTTTCACCACTACCCAAACCATTCACACCATCAAACTATCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

153

Amino Acids

17.24

Weight (kDa)

9.74

Isoelectric Point (pI)

70.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 334
AcuI CTGAAG 1 cut(s) 192
AfaI GTAC 1 cut(s) 348
AgsI TTSAA 2 cut(s) 195, 223
AluBI AGCT 2 cut(s) 206, 249
AluI AGCT 2 cut(s) 206, 249
ApeKI GCWGC 1 cut(s) 230
ApoI RAATTY 1 cut(s) 334
AseI ATTAAT 1 cut(s) 393
AsuHPI GGTGA 2 cut(s) 261, 411
BbvI GCAGC 1 cut(s) 242
BccI CCATC 3 cut(s) 90, 413, 451
BceAI ACGGC 1 cut(s) 362
BfaI CTAG 2 cut(s) 203, 246
BisI GCNGC 1 cut(s) 231
BlsI GCNGC 1 cut(s) 232
BsaXI ACNNNNNCTCC 6 cut(s) 6, 36, 116, 146, 226, 256
Bse3DI GCAATG 1 cut(s) 59
BseGI GGATG 2 cut(s) 338, 405
BseMI GCAATG 1 cut(s) 59
BseRI GAGGAG 1 cut(s) 311
BseXI GCAGC 1 cut(s) 242
BsmI GAATGC 2 cut(s) 101, 154
Bsp1407I TGTACA 1 cut(s) 346
BsrDI GCAATG 1 cut(s) 59
BsrGI TGTACA 1 cut(s) 346
BstAUI TGTACA 1 cut(s) 346
BstC8I GCNNGC 1 cut(s) 285
BstDEI CTNAG 1 cut(s) 456
BstF5I GGATG 2 cut(s) 338, 405
BstNSI RCATGY 6 cut(s) 20, 130, 154, 180, 230, 287
BstV1I GCAGC 1 cut(s) 242
BtsCI GGATG 2 cut(s) 338, 405
Cac8I GCNNGC 1 cut(s) 285
Csp6I GTAC 1 cut(s) 347
CviAII CATG 7 cut(s) 17, 127, 151, 177, 227, 254, 284
CviJI RGCY 7 cut(s) 45, 76, 173, 206, 212, 233, 249
CviKI_1 RGCY 7 cut(s) 45, 76, 173, 206, 212, 233, 249
CviQI GTAC 1 cut(s) 347
DdeI CTNAG 1 cut(s) 456
DraI TTTAAA 1 cut(s) 144
Eco57I CTGAAG 1 cut(s) 192
EcoT22I ATGCAT 3 cut(s) 6, 156, 289
FaeI CATG 7 cut(s) 20, 130, 154, 180, 230, 257, 287
FatI CATG 7 cut(s) 16, 126, 150, 176, 226, 253, 283
Fnu4HI GCNGC 1 cut(s) 231
FokI GGATG 2 cut(s) 325, 392
Fsp4HI GCNGC 1 cut(s) 231
FspBI CTAG 2 cut(s) 203, 246
GluI GCNGC 1 cut(s) 231
Hin1II CATG 7 cut(s) 20, 130, 154, 180, 230, 257, 287
HphI GGTGA 2 cut(s) 261, 411
Hpy188I TCNGA 2 cut(s) 96, 332
HpyAV CCTTC 2 cut(s) 170, 419
HpyCH4V TGCA 9 cut(s) 4, 20, 64, 101, 130, 154, 180, 230, 287
HpyF3I CTNAG 1 cut(s) 456
Hsp92II CATG 7 cut(s) 20, 130, 154, 180, 230, 257, 287
Lsp1109I GCAGC 1 cut(s) 242
MaeI CTAG 2 cut(s) 203, 246
MluCI AATT 1 cut(s) 334
MmeI TCCRAC 1 cut(s) 139
MnlI CCTC 2 cut(s) 252, 332
Mph1103I ATGCAT 3 cut(s) 6, 156, 289
MseI TTAA 3 cut(s) 33, 143, 393
MslI CAYNNNNRTG 1 cut(s) 15
Mva1269I GAATGC 2 cut(s) 101, 154
NlaIII CATG 7 cut(s) 20, 130, 154, 180, 230, 257, 287
NsiI ATGCAT 3 cut(s) 6, 156, 289
NspI RCATGY 6 cut(s) 20, 130, 154, 180, 230, 287
PaeI GCATGC 1 cut(s) 287
PctI GAATGC 2 cut(s) 101, 154
PkrI GCNGC 1 cut(s) 232
PshBI ATTAAT 1 cut(s) 393
RsaI GTAC 1 cut(s) 348
RsaNI GTAC 1 cut(s) 347
RseI CAYNNNNRTG 1 cut(s) 15
SaqAI TTAA 3 cut(s) 33, 143, 393
SatI GCNGC 1 cut(s) 231
SetI ASST 4 cut(s) 204, 208, 251, 274
SmiMI CAYNNNNRTG 1 cut(s) 15
SphI GCATGC 1 cut(s) 287
Sse9I AATT 1 cut(s) 334
SspMI CTAG 2 cut(s) 203, 246
TasI AATT 1 cut(s) 334
TatI WGTACW 1 cut(s) 346
Tru1I TTAA 3 cut(s) 33, 143, 393
Tru9I TTAA 3 cut(s) 33, 143, 393
TseI GCWGC 1 cut(s) 230
TspDTI ATGAA 4 cut(s) 152, 291, 302, 327
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 1 cut(s) 334
XceI RCATGY 6 cut(s) 20, 130, 154, 180, 230, 287
XspI CTAG 2 cut(s) 203, 246
Zsp2I ATGCAT 3 cut(s) 6, 156, 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.