pycom01g03660

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
2769364 .. 2769987
624 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g03660.2

Sequence Viewer

Length: 576 bp
ATGCTTGGAGCCAAAGTGTTGGATGAAATTGAAGACCTAATTGAAGACCAAAGTGTTGGAACCTTGTTCCCTTTATCCAACATTCCACTCCTTCATTTCAGCCACACTCCCACATATCATTACATATCATTCACCACTTATCATTCACCACTTATCATATCATTCACTTATCATATCATTCACTTATCTTATCATTCACTTATCATATCATTCACTTATCATAACCATACACTTATCACTTATCACAACAACAACCTTGCACATGCACATTCATCCACATGCACCCATAATCATTCACTCATCTTTAATCCACATGCATCTTCCATAAATCAAATCAGCCACATCCACATGCACTTATTCCACTTCATCATTACACCACATTCTCTCTCTTTAATCCACATGCATTCATTCTCATTCACTCTTCCATATTCCAGAAATTCGTCAAAACCTCTCCACACCCTTGCAGCAGCCACCAAAACACTTTTCTCCTCCATTGCAGCCACTCCAACCACTCCCCAAACCATTCACACCATCAAACTATCCTTAGACCTTGTGCTACAACGAAGAGGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

192

Amino Acids

21.73

Weight (kDa)

8.09

Isoelectric Point (pI)

54.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 436
AgsI TTSAA 2 cut(s) 32, 44
AjuI GAANNNNNNNTTGG 2 cut(s) 467, 499
ApeKI GCWGC 3 cut(s) 464, 467, 497
ApoI RAATTY 1 cut(s) 436
AsuHPI GGTGA 2 cut(s) 124, 138
BbsI GAAGAC 2 cut(s) 39, 51
BbvI GCAGC 3 cut(s) 476, 479, 509
BccI CCATC 1 cut(s) 539
BisI GCNGC 3 cut(s) 465, 468, 498
BlsI GCNGC 3 cut(s) 466, 469, 499
BmiI GGNNCC 2 cut(s) 10, 61
BmsI GCATC 1 cut(s) 326
BpiI GAAGAC 2 cut(s) 39, 51
BsaXI ACNNNNNCTCC 1 cut(s) 30
Bse3DI GCAATG 1 cut(s) 492
BseGI GGATG 3 cut(s) 28, 272, 342
BseMI GCAATG 1 cut(s) 492
BseRI GAGGAG 1 cut(s) 478
BseXI GCAGC 3 cut(s) 476, 479, 509
BsmI GAATGC 1 cut(s) 403
BspLI GGNNCC 2 cut(s) 10, 61
BsrDI GCAATG 1 cut(s) 492
Bst6I CTCTTC 2 cut(s) 426, 559
BstDEI CTNAG 1 cut(s) 544
BstF5I GGATG 3 cut(s) 28, 272, 342
BstNSI RCATGY 5 cut(s) 266, 282, 317, 352, 403
BstV1I GCAGC 3 cut(s) 476, 479, 509
BstV2I GAAGAC 2 cut(s) 39, 51
BstXI CCANNNNNNTGG 2 cut(s) 19, 56
BtsCI GGATG 3 cut(s) 28, 272, 342
CviAII CATG 5 cut(s) 263, 279, 314, 349, 400
CviJI RGCY 5 cut(s) 11, 102, 339, 470, 500
CviKI_1 RGCY 5 cut(s) 11, 102, 339, 470, 500
DdeI CTNAG 1 cut(s) 544
Eam1104I CTCTTC 2 cut(s) 426, 559
EarI CTCTTC 2 cut(s) 426, 559
EcoT22I ATGCAT 2 cut(s) 319, 405
FaeI CATG 5 cut(s) 266, 282, 317, 352, 403
FatI CATG 5 cut(s) 262, 278, 313, 348, 399
Fnu4HI GCNGC 3 cut(s) 465, 468, 498
FokI GGATG 3 cut(s) 35, 259, 329
Fsp4HI GCNGC 3 cut(s) 465, 468, 498
GluI GCNGC 3 cut(s) 465, 468, 498
Hin1II CATG 5 cut(s) 266, 282, 317, 352, 403
HphI GGTGA 2 cut(s) 124, 138
Hpy188III TCNNGA 1 cut(s) 432
HpyAV CCTTC 1 cut(s) 101
HpyCH4V TGCA 8 cut(s) 260, 266, 282, 317, 352, 403, 464, 497
HpyF3I CTNAG 1 cut(s) 544
Hsp92II CATG 5 cut(s) 266, 282, 317, 352, 403
LmnI GCTCC 1 cut(s) 8
LpnPI CCDG 1 cut(s) 445
Lsp1109I GCAGC 3 cut(s) 476, 479, 509
LweI GCATC 1 cut(s) 326
MboII GAAGA 5 cut(s) 44, 56, 312, 413, 576
MluCI AATT 3 cut(s) 27, 39, 436
MmeI TCCRAC 3 cut(s) 37, 102, 530
MnlI CCTC 3 cut(s) 459, 499, 560
Mph1103I ATGCAT 2 cut(s) 319, 405
MseI TTAA 2 cut(s) 306, 392
MslI CAYNNNNRTG 2 cut(s) 277, 347
Mva1269I GAATGC 1 cut(s) 403
NlaIII CATG 5 cut(s) 266, 282, 317, 352, 403
NlaIV GGNNCC 2 cut(s) 10, 61
NsiI ATGCAT 2 cut(s) 319, 405
NspI RCATGY 5 cut(s) 266, 282, 317, 352, 403
PctI GAATGC 1 cut(s) 403
PkrI GCNGC 3 cut(s) 466, 469, 499
PspN4I GGNNCC 2 cut(s) 10, 61
RseI CAYNNNNRTG 2 cut(s) 277, 347
SaqAI TTAA 2 cut(s) 306, 392
SatI GCNGC 3 cut(s) 465, 468, 498
SetI ASST 5 cut(s) 39, 65, 258, 451, 552
SfaNI GCATC 1 cut(s) 326
SmiMI CAYNNNNRTG 2 cut(s) 277, 347
Sse9I AATT 3 cut(s) 27, 39, 436
TasI AATT 3 cut(s) 27, 39, 436
Tru1I TTAA 2 cut(s) 306, 392
Tru9I TTAA 2 cut(s) 306, 392
TseI GCWGC 3 cut(s) 464, 467, 497
TspDTI ATGAA 5 cut(s) 39, 83, 261, 355, 396
XapI RAATTY 1 cut(s) 436
XceI RCATGY 5 cut(s) 266, 282, 317, 352, 403
Zsp2I ATGCAT 2 cut(s) 319, 405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.