pycom2167g00020

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00002167
Physical Location & Seq
Reverse (-)
44424 .. 44996
573 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom2167g00020.1

Sequence Viewer

Length: 573 bp
ATGCAAAAGGATGCCTTTTGGAGCCTTTTGGAGCAAATTAGAGATTGGAATGGATATCATATGCTTGGAGCCAAGAGGATGGACGAAATTGAAGGATTCCTAATCCATTGCAGCCACATGCACATTCAATCATTCACACCAAAACCTTGCACATGCTTTCCCATTTCATTATTCATTCACTTTGCAGCCACCATTCACTCTTTAATCCACATGCATTCATCATCATTCACCCTAGCTTTAATTCACATGCAAATACATTCATTTTCAGCACCAAACACCATCATTGACATGCACTCCCATTTTCTCCCAAAACATTGCACATGCATTCATAATCATTCATCCATTGCAGCCACATGCATTCCCCCTTTAATCCACATGCTCTCCCATTTCAGATTGCATTCCCACTCACCACAAATCAGCCACATGCATTTTGCCTTTCATCATTGCATCACAAATCAGCCACATGCACTTTTCCTTTCATCATTGCACCACAAATCAGCCACATGCACATTCCCTTTCATCATTGCACCACAAATCAGCCACATGCACATTCACCCCTTTCTCCACCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

191

Amino Acids

21.91

Weight (kDa)

7.83

Isoelectric Point (pI)

63.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 92, 128
AluBI AGCT 1 cut(s) 236
AluI AGCT 1 cut(s) 236
ApeKI GCWGC 3 cut(s) 111, 185, 347
AsuHPI GGTGA 3 cut(s) 220, 399, 545
BbvI GCAGC 3 cut(s) 123, 197, 359
BccI CCATC 2 cut(s) 73, 287
BfaI CTAG 1 cut(s) 233
BisI GCNGC 3 cut(s) 112, 186, 348
BlsI GCNGC 3 cut(s) 113, 187, 349
BmiI GGNNCC 2 cut(s) 23, 70
BmsI GCATC 1 cut(s) 456
BsaXI ACNNNNNCTCC 4 cut(s) 278, 308, 365, 395
Bse3DI GCAATG 6 cut(s) 106, 313, 342, 442, 482, 522
BseGI GGATG 3 cut(s) 16, 84, 338
BseMI GCAATG 6 cut(s) 106, 313, 342, 442, 482, 522
BseXI GCAGC 3 cut(s) 123, 197, 359
BsmI GAATGC 4 cut(s) 214, 324, 357, 397
BspLI GGNNCC 2 cut(s) 23, 70
BsrDI GCAATG 6 cut(s) 106, 313, 342, 442, 482, 522
BstF5I GGATG 3 cut(s) 16, 84, 338
BstV1I GCAGC 3 cut(s) 123, 197, 359
BstXI CCANNNNNNTGG 1 cut(s) 79
BtsCI GGATG 3 cut(s) 16, 84, 338
Eco32I GATATC 1 cut(s) 56
EcoRV GATATC 1 cut(s) 56
EcoT22I ATGCAT 4 cut(s) 216, 326, 359, 429
FalI AAGNNNNNCTT 1 cut(s) 31
FauNDI CATATG 1 cut(s) 60
Fnu4HI GCNGC 3 cut(s) 112, 186, 348
FokI GGATG 3 cut(s) 23, 91, 325
Fsp4HI GCNGC 3 cut(s) 112, 186, 348
FspBI CTAG 1 cut(s) 233
GluI GCNGC 3 cut(s) 112, 186, 348
HinfI GANTC 1 cut(s) 96
HphI GGTGA 3 cut(s) 220, 399, 545
Hpy188I TCNGA 1 cut(s) 392
HpyAV CCTTC 1 cut(s) 86
LmnI GCTCC 3 cut(s) 21, 31, 68
Lsp1109I GCAGC 3 cut(s) 123, 197, 359
LweI GCATC 1 cut(s) 456
MaeI CTAG 1 cut(s) 233
MluCI AATT 3 cut(s) 36, 87, 240
MnlI CCTC 1 cut(s) 69
Mph1103I ATGCAT 4 cut(s) 216, 326, 359, 429
MseI TTAA 3 cut(s) 203, 239, 368
MslI CAYNNNNRTG 1 cut(s) 287
Mva1269I GAATGC 4 cut(s) 214, 324, 357, 397
NdeI CATATG 1 cut(s) 60
NlaIV GGNNCC 2 cut(s) 23, 70
NsiI ATGCAT 4 cut(s) 216, 326, 359, 429
PctI GAATGC 4 cut(s) 214, 324, 357, 397
PfeI GAWTC 1 cut(s) 96
PkrI GCNGC 3 cut(s) 113, 187, 349
PspN4I GGNNCC 2 cut(s) 23, 70
RseI CAYNNNNRTG 1 cut(s) 287
SaqAI TTAA 3 cut(s) 203, 239, 368
SatI GCNGC 3 cut(s) 112, 186, 348
SetI ASST 3 cut(s) 148, 238, 570
SfaNI GCATC 1 cut(s) 456
SmiMI CAYNNNNRTG 1 cut(s) 287
Sse9I AATT 3 cut(s) 36, 87, 240
SspMI CTAG 1 cut(s) 233
TasI AATT 3 cut(s) 36, 87, 240
TfiI GAWTC 1 cut(s) 96
Tru1I TTAA 3 cut(s) 203, 239, 368
Tru9I TTAA 3 cut(s) 203, 239, 368
TseI GCWGC 3 cut(s) 111, 185, 347
TspDTI ATGAA 9 cut(s) 156, 163, 207, 249, 317, 327, 428, 468, 508
XspI CTAG 1 cut(s) 233
Zsp2I ATGCAT 4 cut(s) 216, 326, 359, 429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.