pycom17g17950

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
15481545 .. 15483132
1588 bp
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UTR
Exon/CDS
Intron
pycom17g17950.2

Sequence Viewer

Length: 1269 bp
ATGCAAGGGGGAGAAATTTGGGTCCATTTCATGCACTTAAACCCTAGCCCAATTACACACCAATTTCAGCCACATGAACACAAACCCATTCCTTGCCGTGGCCCTTGCAAATCCATCCCATTTTCAGCCATTACACTTCATCATTGCAGCCACATTTCAAACCCACAATGCAACTCTTTAATCATTCAACCATGCATCACAAAACACCACTCATTGCACATGCCTTTCCCCTCTAATTCACATGCAAAAACCACCAACACATGCACCCATCTACATTCACTTTCCTTTGCCGTGCATTACTCATTCACATTCCAACATTTCCACATGCATTCCCCTTACAATTTCAGCCATTACACATTTTATTTCCTAACCCTACATGCATTATTTATTAGCATCTTCACATGCATTCACACACACTTCACACAAACAAACATCCTTGCCGTGAGTTCCCTACCTTTTCAGCATTCCATTTCATCATTTCACCAACAATTCAGCCACATTCCACATCCACCATCATACATTTATTCTCTTCCCAAACACATACACAACCTGCCATCATTCCAGAAAACCATCCATGCCGTGGGTTCCCTTTCATTTCTGTCAAAGTACATGCACTTCCACCCTTTAATCACATTCATAAATCAGCCACATGCATCTCCCATCACCATTTCAGATTTCCACCAACCTCCTAGCTATTATGTTGCCCCCATTTCACCTATAAATAAGCATCCAACACTCCTCAAAATGCATTCACTCTTCCATACACATTTTCAGTTACAAACACCAAGCAACAAACACATTCTTGCCGTGCATATCCCTTCATTTTCTGCATATTTTCTCTTCATTCTTTCATCTCCAACCACTCCCTACTCCATTCCACATACACCTAAAGCCCTTAACATCTCCTTAGACCTTGTGCCACAACGAAGAGGAAGAGAAGAGTGCCTAAACGTTCATACAATTCAAAATTTAATTCTCTTTGTTTTACAATTCAAGTTTGAGTTGTTGGAATTTTTAGGTCTAGGGGGTGATTCGAAACTATGTTTATATTTGCAATATGAATTGATTACTTTTGGTTGGAATTTCATAAGTTGTGGATTCAATTCGTTTAACTGTTTGATTGATAACTTATTTATGTATAATATAAGTGAGTTTCACCTAATCGTTATGAACTTATATTCACAAGTAGTGGAGGTTGCTTATAAACAATCGCTAACGAATGCCTCGTCAACACTTATAATTTTCATTGAACTTAATGATCTTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

423

Amino Acids

48.56

Weight (kDa)

8.24

Isoelectric Point (pI)

59.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1203, 1238
Acc36I ACCTGC 1 cut(s) 558
AccB7I CCANNNNNTGG 1 cut(s) 580
AclI AACGTT 1 cut(s) 951
AcsI RAATTY 4 cut(s) 15, 967, 1010, 1081
AfaI GTAC 1 cut(s) 608
AfiI CCNNNNNNNGG 2 cut(s) 98, 580
AgsI TTSAA 6 cut(s) 159, 188, 965, 994, 1102, 1250
AluBI AGCT 1 cut(s) 693
AluI AGCT 1 cut(s) 693
AoxI GGCC 1 cut(s) 100
ApeKI GCWGC 1 cut(s) 147
ApoI RAATTY 4 cut(s) 15, 967, 1010, 1081
ArsI GACNNNNNNTTYG 2 cut(s) 1211, 1243
AspS9I GGNCC 2 cut(s) 22, 101
AsuHPI GGTGA 5 cut(s) 473, 655, 705, 1040, 1148
AsuII TTCGAA 1 cut(s) 1034
AvaII GGWCC 1 cut(s) 22
BarI GAAGNNNNNNTAC 2 cut(s) 599, 631
BbvI GCAGC 1 cut(s) 159
BccI CCATC 6 cut(s) 122, 276, 520, 562, 578, 668
BceAI ACGGC 5 cut(s) 81, 275, 425, 563, 791
BfaI CTAG 3 cut(s) 45, 690, 1022
BfuAI ACCTGC 1 cut(s) 558
BisI GCNGC 1 cut(s) 148
BlsI GCNGC 1 cut(s) 149
Bme18I GGWCC 1 cut(s) 22
BmgT120I GGNCC 2 cut(s) 22, 101
BmiI GGNNCC 2 cut(s) 23, 586
BmsI GCATC 4 cut(s) 204, 402, 662, 736
Bpu14I TTCGAA 1 cut(s) 1034
BsaJI CCNNGG 2 cut(s) 97, 579
Bsc4I CCNNNNNNNGG 2 cut(s) 98, 580
Bse3DI GCAATG 2 cut(s) 142, 212
BseDI CCNNGG 2 cut(s) 97, 579
BseGI GGATG 5 cut(s) 114, 432, 505, 570, 727
BseLI CCNNNNNNNGG 2 cut(s) 98, 580
BseMI GCAATG 2 cut(s) 142, 212
BseRI GAGGAG 1 cut(s) 728
BseXI GCAGC 1 cut(s) 159
BshFI GGCC 1 cut(s) 102
BslI CCNNNNNNNGG 2 cut(s) 98, 580
BsmI GAATGC 5 cut(s) 328, 405, 463, 748, 1225
BsnI GGCC 1 cut(s) 102
Bsp119I TTCGAA 1 cut(s) 1034
Bsp143I GATC 1 cut(s) 1258
BspANI GGCC 1 cut(s) 102
BspLI GGNNCC 2 cut(s) 23, 586
BspMI ACCTGC 1 cut(s) 558
BspT104I TTCGAA 1 cut(s) 1034
BsrDI GCAATG 2 cut(s) 142, 212
BssECI CCNNGG 2 cut(s) 97, 579
BssMI GATC 1 cut(s) 1258
Bst4CI ACNGT 1 cut(s) 1115
Bst6I CTCTTC 6 cut(s) 534, 761, 845, 922, 928, 933
BstBI TTCGAA 1 cut(s) 1034
BstDEI CTNAG 1 cut(s) 907
BstDSI CCRYGG 2 cut(s) 97, 579
BstF5I GGATG 5 cut(s) 114, 432, 505, 570, 727
BstKTI GATC 1 cut(s) 1261
BstMBI GATC 1 cut(s) 1258
BstNSI RCATGY 8 cut(s) 223, 245, 264, 328, 380, 405, 613, 653
BstV1I GCAGC 1 cut(s) 159
BsuRI GGCC 1 cut(s) 102
BtgI CCRYGG 2 cut(s) 97, 579
BtsCI GGATG 5 cut(s) 114, 432, 505, 570, 727
BveI ACCTGC 1 cut(s) 558
Cfr13I GGNCC 2 cut(s) 22, 101
Csp6I GTAC 1 cut(s) 607
CviQI GTAC 1 cut(s) 607
DdeI CTNAG 1 cut(s) 907
DpnI GATC 1 cut(s) 1260
DpnII GATC 1 cut(s) 1258
Eam1104I CTCTTC 6 cut(s) 534, 761, 845, 922, 928, 933
EarI CTCTTC 6 cut(s) 534, 761, 845, 922, 928, 933
Eco47I GGWCC 1 cut(s) 22
EcoT22I ATGCAT 6 cut(s) 197, 330, 382, 407, 655, 750
Fnu4HI GCNGC 1 cut(s) 148
FokI GGATG 5 cut(s) 101, 419, 492, 557, 714
Fsp4HI GCNGC 1 cut(s) 148
FspBI CTAG 3 cut(s) 45, 690, 1022
GluI GCNGC 1 cut(s) 148
HaeIII GGCC 1 cut(s) 102
HincII GTYRAC 1 cut(s) 1230
HindII GTYRAC 1 cut(s) 1230
HinfI GANTC 2 cut(s) 1031, 1098
HphI GGTGA 5 cut(s) 473, 655, 705, 1040, 1148
Hpy166II GTNNAC 1 cut(s) 1230
Hpy188I TCNGA 1 cut(s) 673
Hpy188III TCNNGA 1 cut(s) 562
Hpy8I GTNNAC 1 cut(s) 1230
HpyAV CCTTC 1 cut(s) 828
HpyCH4III ACNGT 1 cut(s) 1115
HpyCH4IV ACGT 1 cut(s) 951
HpyF3I CTNAG 1 cut(s) 907
HpySE526I ACGT 1 cut(s) 951
Kzo9I GATC 1 cut(s) 1258
LpnPI CCDG 2 cut(s) 563, 575
Lsp1109I GCAGC 1 cut(s) 159
LweI GCATC 4 cut(s) 204, 402, 662, 736
MaeI CTAG 3 cut(s) 45, 690, 1022
MaeII ACGT 1 cut(s) 951
MaeIII GTNAC 1 cut(s) 774
MalI GATC 1 cut(s) 1260
MboI GATC 1 cut(s) 1258
MboII GAAGA 7 cut(s) 388, 521, 748, 832, 939, 945, 950
MmeI TCCRAC 5 cut(s) 337, 755, 881, 987, 1058
MnlI CCTC 6 cut(s) 241, 696, 749, 923, 1186, 1234
Mph1103I ATGCAT 6 cut(s) 197, 330, 382, 407, 655, 750
MseI TTAA 7 cut(s) 38, 179, 626, 897, 971, 1110, 1254
Mva1269I GAATGC 5 cut(s) 328, 405, 463, 748, 1225
NdeII GATC 1 cut(s) 1258
NlaIV GGNNCC 2 cut(s) 23, 586
NsiI ATGCAT 6 cut(s) 197, 330, 382, 407, 655, 750
NspI RCATGY 8 cut(s) 223, 245, 264, 328, 380, 405, 613, 653
NspV TTCGAA 1 cut(s) 1034
PcsI WCGNNNNNNNCGW 1 cut(s) 1223
PctI GAATGC 5 cut(s) 328, 405, 463, 748, 1225
PfeI GAWTC 2 cut(s) 1031, 1098
PflMI CCANNNNNTGG 1 cut(s) 580
PkrI GCNGC 1 cut(s) 149
PsiI TTATAA 2 cut(s) 1203, 1238
Psp1406I AACGTT 1 cut(s) 951
PspN4I GGNNCC 2 cut(s) 23, 586
PspPI GGNCC 2 cut(s) 22, 101
RsaI GTAC 1 cut(s) 608
RsaNI GTAC 1 cut(s) 607
SaqAI TTAA 7 cut(s) 38, 179, 626, 897, 971, 1110, 1254
SatI GCNGC 1 cut(s) 148
Sau3AI GATC 1 cut(s) 1258
Sau96I GGNCC 2 cut(s) 22, 101
SfaNI GCATC 4 cut(s) 204, 402, 662, 736
SfuI TTCGAA 1 cut(s) 1034
SinI GGWCC 1 cut(s) 22
SspMI CTAG 3 cut(s) 45, 690, 1022
TaaI ACNGT 1 cut(s) 1115
TaiI ACGT 1 cut(s) 954
TaqI TCGA 1 cut(s) 1034
TatI WGTACW 1 cut(s) 606
TfiI GAWTC 2 cut(s) 1031, 1098
Tru1I TTAA 7 cut(s) 38, 179, 626, 897, 971, 1110, 1254
Tru9I TTAA 7 cut(s) 38, 179, 626, 897, 971, 1110, 1254
TseI GCWGC 1 cut(s) 147
Van91I CCANNNNNTGG 1 cut(s) 580
VpaK11BI GGWCC 1 cut(s) 22
XapI RAATTY 4 cut(s) 15, 967, 1010, 1081
XceI RCATGY 8 cut(s) 223, 245, 264, 328, 380, 405, 613, 653
XcmI CCANNNNNNNNNTGG 1 cut(s) 577
XspI CTAG 3 cut(s) 45, 690, 1022
Zsp2I ATGCAT 6 cut(s) 197, 330, 382, 407, 655, 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.