Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0000749

Physical Location & Seq

Genomic Coordinates Forward (+)

6298110 .. 6300955

Gene Structure 2846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006330

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGAGGAAGGCGTGGTGGTGGATGCATCTGGATCTGTGGGGTGGCTGAGGATTGAGACCAGTCCAGCGTTGGATCTTAGTCGGATGGGGGAGGCGTCTTGCGCCGGTCGGAAGGTGTGGCGGGATCTACGGTTTGCTGCTGCGGATCGGTGGATCGACAGTACGGTCCTTTGTTGTTTGAATTCGGATCCTATCGTAGATCTGTGGGTTTTGGGTGTTTGGGTCTACGGAGGTGCGCGAGGACAGGCAAGTAGGGGAGTGCTGGTCTTGGGGATCTGGCGCTGGTGGTGGAGTGGCAGGAGTGGTGGGGTAGCGACGGTGCAGGTGCAGCGGGTGATGTGGGCTGTGAGGGAGAACATAACTGTAACTATATCCACCATGGATAGCGAAGACGATACTAAGTCGTCCACAAAATCATCCACAAAACCATCATCTAAAGATGCTGAAGACGCTTCCAAGATATCTACAAAGTCATCGACAAAGCCGTCATCCAAAGGTACTGATTCGGATGCTGAAGAGGCATCCAAGACGTCTACAAAGTCATCGACAAAAACATCATCCAAAGGTGCTAGTTCAGATAATGAAGACGCATCCAAGACCTCTACAAAGTCATCGACAAAGCCGTCAACCAAAGGTGCCGATTCGGATGCTGCAGAAGCATCCAAGACGTCTACAAAGTCATCGACAAAACCACCATCCAAAGGTGCCACTTCGGATGCTGAAGACGCATCCAAGACCTCTACAAAGTCATCGACAAAGCCGTCATCCAAAAGTGCCGATTCCGATGCTGAAGACGCATCCAAGGCGTCTACAAAGTCATCGACAAAACCATCATCCAAAGGTGCTGGTTTAGATAATGAAGACGCGTCCAAGACATCTACAAAGTCATCGACAAAGCCATCATCCAAAGGTGCTGTTTCGGATAATGAAGATGCATCCAAGACGTCTACAAAGTCATCATCCAAAGGTGCTGGTTCGGATAATGAAGATGGTCAAACCAAGACGTCCACAAAGTCATCGACAAAGCCATCATCCAAAGGTACTGGTTCAGATGATGAAGCCAAGACATCCACAAAGTCATCAACAAAGCCGTCATCTCAGGGCGCTAAAGATGCCGCAAAGTCAACAGCAAAGTCGTTATCCGGCGGTGGTGGTAAGGAGTCAGACAAAGTCGAAATCAGTGAGAGGAAAGCAGGCAAGTCGTCAGGAGGGGCCCACTCTGAGAATAAGGACGAGGTGCCATCGACTAAAGAGATCATGAGCAGCGCGAAGTTGGTGGCGTCGGCGGCACAAGGGGAGAATGTGGAGAAGGCTGAGTTAGCGGGGGCTGCGAGCAACCTAGTCGGCGCCGCCAATCACTACGGCAAGCTTGAGCAATCGGGGTTTGGCAAGTATCTGGATAAGGCTGAGGATATGCTCCGTAAGATGGCCAAGAAGTCTGATTCTGAGTCCGGCACTGATGACAATAAGACTAAGAAGTCTGGTGCCGGTGACAGTAAGTCTAAGAAGTCTGGCGCTGGTGATAGTAAGACTAAGAAGTCTAGTGCCAGTGACGGTGAAGGCGATGAGGACAAGCCGAAGAAAAAATCAGAGAAGAAGCCAATTGCCAAAGATGATGAGGAAGAAGGTGGTGGTGGTGGGTTTGGAGATATCTTGAAGATGGCTAAAGGTTTCTTGAAGGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002831 GO:0002833 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009408 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0023052 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0032870 GO:0033993 GO:0042221 GO:0043207 GO:0043900 GO:0043902 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0080134 GO:0097305 GO:0097306 GO:1900424 GO:1900426 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

562

Amino Acids

57.76

Weight (kDa)

9.06

Isoelectric Point (pI)

39.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000749)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13930 AT1G13930 AT1G13930 AT2G03440
fragaria_vesca	FvH4_4g30460
malus_domestica	MD13G1065600.v1.1 MD13G1065700.v1.1 MD16G1064100.v1.1 MD16G1064200.v1.1
prunus_persica	Prupe.1G282500_v2.0.a1
pyrus_communis	pycom13g05780 pycom13g05790
rosa_chinensis	RchiOBHm_Chr1g0320671 RchiOBHm_Chr2g0084691 RchiOBHm_Chr4g0391511 RchiOBHm_Chr4g0397231 RchiOBHm_Chr5g0038511 RchiOBHm_Chr7g0218611 RchiOBHm_Chr7g0243091
rosa_laevigata	RLG00000001214 RLG00000003134 RLG00000005591 RLG00000006330 RLG00000008137 RLG00000020620 RLG00000024858 RLG00000027359
rosa_multiflora	Rmu_co8437595.1_g000001 Rmu_sc0001781.1_g000012 Rmu_sc0001796.1_g000001 Rmu_sc0002245.1_g000048 Rmu_sc0002312.1_g000067 Rmu_sc0006553.1_g000012 Rmu_sc0007391.1_g000013 Rmu_ssc0000436.1_g000004
rosa_roxburghii	Rroxscaffold_1G00072700 Rroxscaffold_3G00245360 Rroxscaffold_3G00267980 Rroxscaffold_4G00319730 Rroxscaffold_5G00374780 Rroxscaffold_7G00197900
rosa_rugosa	Rorug01G0161500.1 Rorug04G0313200 Rorug04G0313200 Rorug07G0153800
rosa_samantha	Rh1BG233900 Rh1DG068600 Rh1DG091400 Rh1DG261300 Rh2AG113800 Rh2AG464700 Rh4AG364000 Rh4BG288300 Rh4BG375300 Rh4CG180100 Rh4CG389400 Rh4DG224500 Rh4DG369700 Rh5AG078000 Rh5CG365500 Rh5DG489000 Rh5DG546500 Rh6BG092900 Rh7BG230100 Rh7BG332300 Rh7DG399200
rosa_wichuraiana	Rw0G007230 Rw0G016780 Rw2G045830 Rw4G006320 Rw5G027470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	313
AasI	GACNNNNNNGTC	6 cut(s)	164, 484, 622, 760, 1477, 1537
AatII	GACGTC	4 cut(s)	533, 671, 947, 1007
Acc36I	ACCTGC	1 cut(s)	313
AccB1I	GGYRCC	5 cut(s)	635, 704, 1237, 1346, 1484
AccI	GTMKAC	5 cut(s)	225, 533, 671, 809, 947
AccII	CGCG	3 cut(s)	238, 866, 1268
AciI	CCGC	8 cut(s)	121, 143, 331, 1116, 1146, 1286, 1322, 1350
AclWI	GGATC	8 cut(s)	40, 81, 132, 153, 161, 182, 195, 281
AcoI	YGGCCR	1 cut(s)	1428
AcsI	RAATTY	1 cut(s)	181
AcuI	CTGAAG	4 cut(s)	465, 534, 741, 810
AcyI	GRCGYC	8 cut(s)	95, 530, 668, 806, 944, 1004, 1280, 1347
AfaI	GTAC	3 cut(s)	163, 499, 1042
AfiI	CCNNNNNNNGG	2 cut(s)	701, 1426
AflIII	ACRYGT	1 cut(s)	864
AgsI	TTSAA	3 cut(s)	181, 1657, 1678
AhdI	GACNNNNNGTC	1 cut(s)	1498
AluBI	AGCT	1 cut(s)	1369
AluI	AGCT	1 cut(s)	1369
Alw26I	GTCTC	1 cut(s)	50
AlwI	GGATC	8 cut(s)	40, 81, 132, 153, 161, 182, 195, 281
AoxI	GGCC	2 cut(s)	1212, 1428
ApaI	GGGCCC	1 cut(s)	1216
ApeKI	GCWGC	6 cut(s)	137, 140, 328, 650, 1263, 1328
ApoI	RAATTY	1 cut(s)	181
AspLEI	GCGC	7 cut(s)	104, 238, 282, 1106, 1268, 1349, 1517
AspS9I	GGNCC	3 cut(s)	166, 1212, 1213
AsuHPI	GGTGA	4 cut(s)	346, 1502, 1532, 1568
AvaII	GGWCC	1 cut(s)	166
BaeGI	GKGCMC	1 cut(s)	1216
BalI	TGGCCA	1 cut(s)	1430
BamHI	GGATCC	1 cut(s)	187
BanI	GGYRCC	5 cut(s)	635, 704, 1237, 1346, 1484
BanII	GRGCYC	1 cut(s)	1216
BbsI	GAAGAC	6 cut(s)	396, 453, 591, 729, 798, 867
BbvCI	CCTCAGC	2 cut(s)	47, 1407
BbvI	GCAGC	6 cut(s)	124, 127, 340, 637, 1275, 1315
BceAI	ACGGC	5 cut(s)	469, 607, 745, 1075, 1378
BcgI	CGANNNNNNTGC	8 cut(s)	629, 663, 767, 801, 1182, 1216, 1324, 1358
BcoDI	GTCTC	1 cut(s)	50
BfaI	CTAG	3 cut(s)	570, 1340, 1542
BfmI	CTRYAG	1 cut(s)	651
BfoI	RGCGCY	4 cut(s)	283, 1107, 1350, 1518
BfuAI	ACCTGC	1 cut(s)	313
BglII	AGATCT	1 cut(s)	199
BisI	GCNGC	9 cut(s)	138, 141, 329, 651, 1116, 1264, 1287, 1329, 1350
BlsI	GCNGC	9 cut(s)	139, 142, 330, 652, 1117, 1265, 1288, 1330, 1351
Bme18I	GGWCC	1 cut(s)	166
BmeRI	GACNNNNNGTC	1 cut(s)	1498
BmgT120I	GGNCC	3 cut(s)	166, 1212, 1213
BmiI	GGNNCC	8 cut(s)	189, 637, 706, 1213, 1214, 1239, 1348, 1486
BpiI	GAAGAC	6 cut(s)	396, 453, 591, 729, 798, 867
Bpu10I	CCTNAGC	2 cut(s)	47, 1407
BpuEI	CTTGAG	1 cut(s)	1391
BsaHI	GRCGYC	8 cut(s)	95, 530, 668, 806, 944, 1004, 1280, 1347
BsaI	GGTCTC	1 cut(s)	50
BsaJI	CCNNGG	2 cut(s)	378, 801
BsaXI	ACNNNNNCTCC	2 cut(s)	249, 279
Bsc4I	CCNNNNNNNGG	2 cut(s)	701, 1426
Bse118I	RCCGGY	2 cut(s)	104, 1487
Bse1I	ACTGG	3 cut(s)	60, 1048, 1548
BseDI	CCNNGG	2 cut(s)	378, 801
BseLI	CCNNNNNNNGG	2 cut(s)	701, 1426
BseMII	CTCAG	6 cut(s)	38, 1112, 1212, 1305, 1398, 1437
BseNI	ACTGG	3 cut(s)	60, 1048, 1548
BseSI	GKGCMC	1 cut(s)	1216
BseXI	GCAGC	6 cut(s)	124, 127, 340, 637, 1275, 1315
BsgI	GTGCAG	2 cut(s)	341, 347
Bsh1236I	CGCG	3 cut(s)	238, 866, 1268
Bsh1285I	CGRYCG	1 cut(s)	109
BshFI	GGCC	2 cut(s)	1214, 1430
BshNI	GGYRCC	5 cut(s)	635, 704, 1237, 1346, 1484
BsiEI	CGRYCG	1 cut(s)	109
BsiSI	CCGG	4 cut(s)	105, 1143, 1452, 1488
BslI	CCNNNNNNNGG	2 cut(s)	701, 1426
BsmAI	GTCTC	1 cut(s)	50
BsnI	GGCC	2 cut(s)	1214, 1430
Bso31I	GGTCTC	1 cut(s)	50
Bsp120I	GGGCCC	1 cut(s)	1212
Bsp1286I	GDGCHC	1 cut(s)	1216
Bsp143I	GATC	9 cut(s)	32, 73, 124, 145, 153, 187, 199, 273, 1254
Bsp19I	CCATGG	1 cut(s)	378
BspACI	CCGC	8 cut(s)	121, 143, 331, 1116, 1146, 1286, 1322, 1350
BspANI	GGCC	2 cut(s)	1214, 1430
BspCNI	CTCAG	6 cut(s)	39, 1111, 1213, 1306, 1399, 1438
BspFNI	CGCG	3 cut(s)	238, 866, 1268
BspHI	TCATGA	1 cut(s)	1257
BspLI	GGNNCC	8 cut(s)	189, 637, 706, 1213, 1214, 1239, 1348, 1486
BspMAI	CTGCAG	1 cut(s)	655
BspMI	ACCTGC	1 cut(s)	313
BspPI	GGATC	8 cut(s)	40, 81, 132, 153, 161, 182, 195, 281
BspT107I	GGYRCC	5 cut(s)	635, 704, 1237, 1346, 1484
BspTNI	GGTCTC	1 cut(s)	50
BsrFI	RCCGGY	2 cut(s)	104, 1487
BsrI	ACTGG	3 cut(s)	60, 1048, 1548
BssAI	RCCGGY	2 cut(s)	104, 1487
BssECI	CCNNGG	2 cut(s)	378, 801
BssMI	GATC	9 cut(s)	32, 73, 124, 145, 153, 187, 199, 273, 1254
BssNI	GRCGYC	8 cut(s)	95, 530, 668, 806, 944, 1004, 1280, 1347
BssT1I	CCWWGG	2 cut(s)	378, 801
Bst4CI	ACNGT	7 cut(s)	132, 161, 166, 319, 364, 1496, 1556
Bst6I	CTCTTC	1 cut(s)	510
BstACI	GRCGYC	8 cut(s)	95, 530, 668, 806, 944, 1004, 1280, 1347
BstC8I	GCNNGC	3 cut(s)	1195, 1333, 1367
BstDSI	CCRYGG	1 cut(s)	378
BstFNI	CGCG	3 cut(s)	238, 866, 1268
BstH2I	RGCGCY	4 cut(s)	283, 1107, 1350, 1518
BstHHI	GCGC	7 cut(s)	104, 238, 282, 1106, 1268, 1349, 1517
BstKTI	GATC	9 cut(s)	35, 76, 127, 148, 156, 190, 202, 276, 1257
BstMAI	GTCTC	1 cut(s)	50
BstMBI	GATC	9 cut(s)	32, 73, 124, 145, 153, 187, 199, 273, 1254
BstMCI	CGRYCG	1 cut(s)	109
BstSFI	CTRYAG	1 cut(s)	651
BstSLI	GKGCMC	1 cut(s)	1216
BstUI	CGCG	3 cut(s)	238, 866, 1268
BstV1I	GCAGC	6 cut(s)	124, 127, 340, 637, 1275, 1315
BstV2I	GAAGAC	6 cut(s)	396, 453, 591, 729, 798, 867
BstX2I	RGATCY	6 cut(s)	32, 73, 124, 187, 199, 273
BstYI	RGATCY	6 cut(s)	32, 73, 124, 187, 199, 273
BsuRI	GGCC	2 cut(s)	1214, 1430
BtgI	CCRYGG	1 cut(s)	378
BtgZI	GCGATG	1 cut(s)	1578
BtsIMutI	CAGTG	3 cut(s)	1186, 1455, 1555
BveI	ACCTGC	1 cut(s)	313
Cac8I	GCNNGC	3 cut(s)	1195, 1333, 1367
CciI	TCATGA	1 cut(s)	1257
CfoI	GCGC	7 cut(s)	104, 238, 282, 1106, 1268, 1349, 1517
Cfr10I	RCCGGY	2 cut(s)	104, 1487
Cfr13I	GGNCC	3 cut(s)	166, 1212, 1213
CseI	GACGC	9 cut(s)	84, 458, 596, 734, 795, 803, 855, 872, 1269
Csp6I	GTAC	3 cut(s)	162, 498, 1041
CviAII	CATG	2 cut(s)	379, 1258
CviQI	GTAC	3 cut(s)	162, 498, 1041
DinI	GGCGCC	1 cut(s)	1348
DpnI	GATC	9 cut(s)	34, 75, 126, 147, 155, 189, 201, 275, 1256
DpnII	GATC	9 cut(s)	32, 73, 124, 145, 153, 187, 199, 273, 1254
DrdI	GACNNNNNNGTC	6 cut(s)	164, 484, 622, 760, 1477, 1537
DriI	GACNNNNNGTC	1 cut(s)	1498
DseDI	GACNNNNNNGTC	6 cut(s)	164, 484, 622, 760, 1477, 1537
EaeI	YGGCCR	1 cut(s)	1428
Eam1104I	CTCTTC	1 cut(s)	510
Eam1105I	GACNNNNNGTC	1 cut(s)	1498
EarI	CTCTTC	1 cut(s)	510
Eco130I	CCWWGG	2 cut(s)	378, 801
Eco24I	GRGCYC	1 cut(s)	1216
Eco31I	GGTCTC	1 cut(s)	50
Eco32I	GATATC	2 cut(s)	462, 1651
Eco47I	GGWCC	1 cut(s)	166
Eco57I	CTGAAG	4 cut(s)	465, 534, 741, 810
EcoO109I	RGGNCCY	1 cut(s)	1212
EcoRI	GAATTC	1 cut(s)	181
EcoRV	GATATC	2 cut(s)	462, 1651
EcoT14I	CCWWGG	2 cut(s)	378, 801
EcoT22I	ATGCAT	2 cut(s)	28, 937
EcoT38I	GRGCYC	1 cut(s)	1216
EgeI	GGCGCC	1 cut(s)	1348
EheI	GGCGCC	1 cut(s)	1348
ErhI	CCWWGG	2 cut(s)	378, 801
FaeI	CATG	2 cut(s)	382, 1261
FaiI	YATR	5 cut(s)	359, 371, 380, 1259, 1415
FatI	CATG	2 cut(s)	378, 1257
FauI	CCCGC	3 cut(s)	114, 324, 1315
FblI	GTMKAC	5 cut(s)	225, 533, 671, 809, 947
Fnu4HI	GCNGC	9 cut(s)	138, 141, 329, 651, 1116, 1264, 1287, 1329, 1350
FriOI	GRGCYC	1 cut(s)	1216
Fsp4HI	GCNGC	9 cut(s)	138, 141, 329, 651, 1116, 1264, 1287, 1329, 1350
FspBI	CTAG	3 cut(s)	570, 1340, 1542
GlaI	GCGC	7 cut(s)	103, 237, 281, 1105, 1267, 1348, 1516
GluI	GCNGC	9 cut(s)	138, 141, 329, 651, 1116, 1264, 1287, 1329, 1350
HaeII	RGCGCY	4 cut(s)	283, 1107, 1350, 1518
HaeIII	GGCC	2 cut(s)	1214, 1430
HapII	CCGG	4 cut(s)	105, 1143, 1452, 1488
HgaI	GACGC	9 cut(s)	84, 458, 596, 734, 795, 803, 855, 872, 1269
HhaI	GCGC	7 cut(s)	104, 238, 282, 1106, 1268, 1349, 1517
Hin1I	GRCGYC	8 cut(s)	95, 530, 668, 806, 944, 1004, 1280, 1347
Hin1II	CATG	2 cut(s)	382, 1261
Hin6I	GCGC	7 cut(s)	102, 236, 280, 1104, 1266, 1347, 1515
HinP1I	GCGC	7 cut(s)	102, 236, 280, 1104, 1266, 1347, 1515
HincII	GTYRAC	2 cut(s)	627, 1125
HindII	GTYRAC	2 cut(s)	627, 1125
HindIII	AAGCTT	1 cut(s)	1367
HinfI	GANTC	6 cut(s)	503, 641, 779, 1160, 1442, 1448
HpaII	CCGG	4 cut(s)	105, 1143, 1452, 1488
HphI	GGTGA	4 cut(s)	346, 1502, 1532, 1568
Hpy166II	GTNNAC	9 cut(s)	226, 408, 534, 627, 672, 810, 948, 1008, 1125
Hpy188III	TCNNGA	6 cut(s)	30, 1206, 1258, 1397, 1654, 1675
Hpy8I	GTNNAC	9 cut(s)	226, 408, 534, 627, 672, 810, 948, 1008, 1125
Hpy99I	CGWCG	2 cut(s)	319, 1285
HpyAV	CCTTC	5 cut(s)	106, 1303, 1553, 1619, 1672
HpyCH4III	ACNGT	7 cut(s)	132, 161, 166, 319, 364, 1496, 1556
HpyCH4IV	ACGT	4 cut(s)	530, 668, 944, 1004
HpyCH4V	TGCA	5 cut(s)	26, 322, 328, 653, 935
HpySE526I	ACGT	4 cut(s)	530, 668, 944, 1004
Hsp92I	GRCGYC	8 cut(s)	95, 530, 668, 806, 944, 1004, 1280, 1347
Hsp92II	CATG	2 cut(s)	382, 1261
HspAI	GCGC	7 cut(s)	102, 236, 280, 1104, 1266, 1347, 1515
KasI	GGCGCC	1 cut(s)	1346
Kzo9I	GATC	9 cut(s)	32, 73, 124, 145, 153, 187, 199, 273, 1254
LmnI	GCTCC	1 cut(s)	1422
Lsp1109I	GCAGC	6 cut(s)	124, 127, 340, 637, 1275, 1315
MaeI	CTAG	3 cut(s)	570, 1340, 1542
MaeII	ACGT	4 cut(s)	530, 668, 944, 1004
MaeIII	GTNAC	3 cut(s)	364, 1490, 1550
MalI	GATC	9 cut(s)	34, 75, 126, 147, 155, 189, 201, 275, 1256
MboI	GATC	9 cut(s)	32, 73, 124, 145, 153, 187, 199, 273, 1254
MfeI	CAATTG	1 cut(s)	1602
MflI	RGATCY	6 cut(s)	32, 73, 124, 187, 199, 273
MhlI	GDGCHC	1 cut(s)	1216
MlsI	TGGCCA	1 cut(s)	1430
MluCI	AATT	2 cut(s)	181, 1602
MluI	ACGCGT	1 cut(s)	864
MluNI	TGGCCA	1 cut(s)	1430
Mly113I	GGCGCC	1 cut(s)	1347
MlyI	GAGTC	2 cut(s)	1169, 1457
MmeI	TCCRAC	3 cut(s)	51, 62, 89
Mox20I	TGGCCA	1 cut(s)	1430
Mph1103I	ATGCAT	2 cut(s)	28, 937
MscI	TGGCCA	1 cut(s)	1430
Msp20I	TGGCCA	1 cut(s)	1430
MspA1I	CMGCKG	1 cut(s)	331
MspI	CCGG	4 cut(s)	105, 1143, 1452, 1488
MunI	CAATTG	1 cut(s)	1602
MvnI	CGCG	3 cut(s)	238, 866, 1268
NarI	GGCGCC	1 cut(s)	1347
NcoI	CCATGG	1 cut(s)	378
NdeII	GATC	9 cut(s)	32, 73, 124, 145, 153, 187, 199, 273, 1254
NlaIII	CATG	2 cut(s)	382, 1261
NlaIV	GGNNCC	8 cut(s)	189, 637, 706, 1213, 1214, 1239, 1348, 1486
NmuCI	GTSAC	2 cut(s)	1490, 1550
NsiI	ATGCAT	2 cut(s)	28, 937
PagI	TCATGA	1 cut(s)	1257
PaqCI	CACCTGC	1 cut(s)	313
PcsI	WCGNNNNNNNCGW	4 cut(s)	482, 620, 758, 1560
PfeI	GAWTC	4 cut(s)	503, 641, 779, 1442
PflFI	GACNNNGTC	1 cut(s)	1169
PkrI	GCNGC	9 cut(s)	139, 142, 330, 652, 1117, 1265, 1288, 1330, 1351
PleI	GAGTC	2 cut(s)	1168, 1456
PluTI	GGCGCC	1 cut(s)	1350
PpsI	GAGTC	2 cut(s)	1168, 1456
PspN4I	GGNNCC	8 cut(s)	189, 637, 706, 1213, 1214, 1239, 1348, 1486
PspOMI	GGGCCC	1 cut(s)	1212
PspPI	GGNCC	3 cut(s)	166, 1212, 1213
PstI	CTGCAG	1 cut(s)	655
PsuI	RGATCY	6 cut(s)	32, 73, 124, 187, 199, 273
PsyI	GACNNNGTC	1 cut(s)	1169
RsaI	GTAC	3 cut(s)	163, 499, 1042
RsaNI	GTAC	3 cut(s)	162, 498, 1041
SatI	GCNGC	9 cut(s)	138, 141, 329, 651, 1116, 1264, 1287, 1329, 1350
Sau3AI	GATC	9 cut(s)	32, 73, 124, 145, 153, 187, 199, 273, 1254
Sau96I	GGNCC	3 cut(s)	166, 1212, 1213
SchI	GAGTC	2 cut(s)	1169, 1457
SduI	GDGCHC	1 cut(s)	1216
SfcI	CTRYAG	1 cut(s)	651
SfoI	GGCGCC	1 cut(s)	1348
SinI	GGWCC	1 cut(s)	166
SmlI	CTYRAG	1 cut(s)	1370
SmoI	CTYRAG	1 cut(s)	1370
Sse9I	AATT	2 cut(s)	181, 1602
SsiI	CCGC	8 cut(s)	121, 143, 331, 1116, 1146, 1286, 1322, 1350
SspDI	GGCGCC	1 cut(s)	1346
SspMI	CTAG	3 cut(s)	570, 1340, 1542
StyI	CCWWGG	2 cut(s)	378, 801
TaaI	ACNGT	7 cut(s)	132, 161, 166, 319, 364, 1496, 1556
TaiI	ACGT	4 cut(s)	533, 671, 947, 1007
TasI	AATT	2 cut(s)	181, 1602
TauI	GCSGC	3 cut(s)	1118, 1289, 1352
TfiI	GAWTC	4 cut(s)	503, 641, 779, 1442
TscAI	CASTG	3 cut(s)	1186, 1462, 1555
TseFI	GTSAC	2 cut(s)	1490, 1550
TseI	GCWGC	6 cut(s)	137, 140, 328, 650, 1263, 1328
Tsp45I	GTSAC	2 cut(s)	1490, 1550
TspDTI	ATGAA	5 cut(s)	597, 873, 942, 999, 1071
TspGWI	ACGGA	2 cut(s)	243, 1409
TspRI	CASTG	3 cut(s)	1186, 1462, 1555
Tth111I	GACNNNGTC	1 cut(s)	1169
VpaK11BI	GGWCC	1 cut(s)	166
XapI	RAATTY	1 cut(s)	181
XcmI	CCANNNNNNNNNTGG	1 cut(s)	67
XmiI	GTMKAC	5 cut(s)	225, 533, 671, 809, 947
XspI	CTAG	3 cut(s)	570, 1340, 1542
ZraI	GACGTC	4 cut(s)	531, 669, 945, 1005
Zsp2I	ATGCAT	2 cut(s)	28, 937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.