RLG00000007406

Belongs to the glycosyltransferase 31 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
16524176 .. 16525108
933 bp
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UTR
Exon/CDS
Intron
RLM00000007406

Sequence Viewer

Length: 390 bp
ATGTTGCTGGCAATAGTGAAGGATAACCATCTGGAGGCACCTGAAGAGTTCTCAAAGAAGGATACACTATTCTTTGCTCATGTTGCTGATAAGTTTTATGCCAAACTCAATGATGATGTTTATTTAAATATTGGTCAGTATTACATGGACTCATTTTTCAATAGGATTTGTTTATGTACCAGCTCTGCTTCCTCACAATTGCTACCCCCTCCCTTCGTTTTAGCTAATATTCTATTTTTTAATGTGTTTATCATATTCTTTATTTCTGTAAATGTAGATTGGAAACACCATATTCTTTATGTTCTGGGAGCTGCACTTGCAACTCATTTAGACAAGCCTTGCGTTTATATTGGGTGCATGCAGTTGGGCGAAGTTTTCTTTGAGCTGTGA

Protein Analysis

130

Amino Acids

14.81

Weight (kDa)

5.35

Isoelectric Point (pI)

43.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 37
AcuI CTGAAG 1 cut(s) 63
AfaI GTAC 1 cut(s) 178
AfiI CCNNNNNNNGG 1 cut(s) 34
AgsI TTSAA 1 cut(s) 160
AluBI AGCT 4 cut(s) 183, 224, 311, 385
AluI AGCT 4 cut(s) 183, 224, 311, 385
ApeKI GCWGC 1 cut(s) 311
BanI GGYRCC 1 cut(s) 37
BbvI GCAGC 1 cut(s) 298
BccI CCATC 1 cut(s) 36
BciVI GTATCC 1 cut(s) 55
BfuI GTATCC 1 cut(s) 55
BisI GCNGC 1 cut(s) 312
BlsI GCNGC 1 cut(s) 313
BmiI GGNNCC 1 cut(s) 39
BpmI CTGGAG 1 cut(s) 53
BsaBI GATNNNNATC 1 cut(s) 27
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse8I GATNNNNATC 1 cut(s) 27
BseJI GATNNNNATC 1 cut(s) 27
BseLI CCNNNNNNNGG 1 cut(s) 34
BseXI GCAGC 1 cut(s) 298
BsgI GTGCAG 1 cut(s) 297
BshNI GGYRCC 1 cut(s) 37
BslI CCNNNNNNNGG 1 cut(s) 34
BspLI GGNNCC 1 cut(s) 39
BspT107I GGYRCC 1 cut(s) 37
Bst6I CTCTTC 1 cut(s) 39
BstC8I GCNNGC 2 cut(s) 9, 359
BstMWI GCNNNNNNNGC 2 cut(s) 83, 317
BstNSI RCATGY 1 cut(s) 361
BstV1I GCAGC 1 cut(s) 298
BsuI GTATCC 1 cut(s) 55
Cac8I GCNNGC 2 cut(s) 9, 359
Csp6I GTAC 1 cut(s) 177
CviAII CATG 3 cut(s) 80, 145, 358
CviJI RGCY 5 cut(s) 183, 224, 311, 337, 385
CviKI_1 RGCY 5 cut(s) 183, 224, 311, 337, 385
CviQI GTAC 1 cut(s) 177
DraI TTTAAA 1 cut(s) 126
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
Eco57I CTGAAG 1 cut(s) 63
FaeI CATG 3 cut(s) 83, 148, 361
FaiI YATR 9 cut(s) 81, 99, 146, 175, 254, 291, 300, 348, 359
FatI CATG 3 cut(s) 79, 144, 357
Fnu4HI GCNGC 1 cut(s) 312
Fsp4HI GCNGC 1 cut(s) 312
GluI GCNGC 1 cut(s) 312
GsuI CTGGAG 1 cut(s) 53
Hin1II CATG 3 cut(s) 83, 148, 361
HinfI GANTC 1 cut(s) 149
Hpy188III TCNNGA 1 cut(s) 32
HpyAV CCTTC 3 cut(s) 13, 52, 223
HpyCH4V TGCA 4 cut(s) 314, 320, 357, 361
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 317
Hsp92II CATG 3 cut(s) 83, 148, 361
LmnI GCTCC 1 cut(s) 308
LpnPI CCDG 4 cut(s) 17, 54, 193, 290
Lsp1109I GCAGC 1 cut(s) 298
MboII GAAGA 1 cut(s) 56
MfeI CAATTG 1 cut(s) 197
MluCI AATT 1 cut(s) 197
MlyI GAGTC 1 cut(s) 143
MnlI CCTC 3 cut(s) 28, 202, 219
MseI TTAA 2 cut(s) 125, 240
MunI CAATTG 1 cut(s) 197
MwoI GCNNNNNNNGC 2 cut(s) 83, 317
NlaIII CATG 3 cut(s) 83, 148, 361
NlaIV GGNNCC 1 cut(s) 39
NspI RCATGY 1 cut(s) 361
PaeI GCATGC 1 cut(s) 361
PkrI GCNGC 1 cut(s) 313
PleI GAGTC 1 cut(s) 143
PpsI GAGTC 1 cut(s) 143
PspN4I GGNNCC 1 cut(s) 39
RsaI GTAC 1 cut(s) 178
RsaNI GTAC 1 cut(s) 177
SaqAI TTAA 2 cut(s) 125, 240
SatI GCNGC 1 cut(s) 312
SchI GAGTC 1 cut(s) 143
SetI ASST 5 cut(s) 43, 185, 226, 313, 387
SmiI ATTTAAAT 1 cut(s) 126
SphI GCATGC 1 cut(s) 361
Sse9I AATT 1 cut(s) 197
SspI AATATT 2 cut(s) 130, 229
SwaI ATTTAAAT 1 cut(s) 126
TasI AATT 1 cut(s) 197
Tru1I TTAA 2 cut(s) 125, 240
Tru9I TTAA 2 cut(s) 125, 240
TseI GCWGC 1 cut(s) 311
XceI RCATGY 1 cut(s) 361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.