RLG00000033863

Belongs to the glycosyltransferase 31 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
33440343 .. 33441283
941 bp
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UTR
Exon/CDS
Intron
RLM00000033863

Sequence Viewer

Length: 366 bp
ATGTTGCTGGCAATAGTGAAGGATACCCATCTGGAAGCACCTGAAGAGTCCTCAAAGAAGGCTACACTGTTCTTTGCTCATGTTGCTAATAAGTTTTATGCCAAAGTCAATGATGATGTTTATTTAAATATTGGTCAGTATTACATGGACTCATTTTTCAATAGGATTTGTTTATGTACCAGCTCTGCTTCCTCACAATTGCTACCCCCTTCCTTTGTTTTAGCTAATATTCTATTATTTAATGTGTTTATCATGTTCTTGAGGTATGATTTCTATGTTCTGGGAGCTGCACTTGCAACTCTTTTAGACAAGCCTTGCGTTTATATTGGGTGCATGCAGTCGAGCGAAGTTTTCTCTGAGCTGTGA

Protein Analysis

122

Amino Acids

13.68

Weight (kDa)

5.16

Isoelectric Point (pI)

61.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 63
AfaI GTAC 1 cut(s) 178
AgsI TTSAA 1 cut(s) 160
AluBI AGCT 4 cut(s) 183, 224, 287, 361
AluI AGCT 4 cut(s) 183, 224, 287, 361
ApeKI GCWGC 1 cut(s) 287
BbvI GCAGC 1 cut(s) 274
BccI CCATC 1 cut(s) 36
BciVI GTATCC 1 cut(s) 16
BfuI GTATCC 1 cut(s) 16
BisI GCNGC 1 cut(s) 288
BlsI GCNGC 1 cut(s) 289
BpuEI CTTGAG 1 cut(s) 280
BsaBI GATNNNNATC 1 cut(s) 27
Bse8I GATNNNNATC 1 cut(s) 27
BseJI GATNNNNATC 1 cut(s) 27
BseMII CTCAG 1 cut(s) 348
BseXI GCAGC 1 cut(s) 274
BsgI GTGCAG 1 cut(s) 273
BspCNI CTCAG 1 cut(s) 349
Bst4CI ACNGT 1 cut(s) 69
Bst6I CTCTTC 1 cut(s) 39
BstC8I GCNNGC 2 cut(s) 9, 335
BstDEI CTNAG 1 cut(s) 357
BstMWI GCNNNNNNNGC 2 cut(s) 83, 293
BstNSI RCATGY 1 cut(s) 337
BstV1I GCAGC 1 cut(s) 274
BsuI GTATCC 1 cut(s) 16
BtsIMutI CAGTG 1 cut(s) 65
Cac8I GCNNGC 2 cut(s) 9, 335
Csp6I GTAC 1 cut(s) 177
CviAII CATG 4 cut(s) 80, 145, 253, 334
CviJI RGCY 6 cut(s) 62, 183, 224, 287, 313, 361
CviKI_1 RGCY 6 cut(s) 62, 183, 224, 287, 313, 361
CviQI GTAC 1 cut(s) 177
DdeI CTNAG 1 cut(s) 357
DraI TTTAAA 1 cut(s) 126
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
Eco57I CTGAAG 1 cut(s) 63
FaeI CATG 4 cut(s) 83, 148, 256, 337
FaiI YATR 9 cut(s) 81, 99, 146, 175, 254, 267, 276, 324, 335
FatI CATG 4 cut(s) 79, 144, 252, 333
Fnu4HI GCNGC 1 cut(s) 288
Fsp4HI GCNGC 1 cut(s) 288
GluI GCNGC 1 cut(s) 288
Hin1II CATG 4 cut(s) 83, 148, 256, 337
HinfI GANTC 2 cut(s) 47, 149
Hpy188I TCNGA 1 cut(s) 358
Hpy188III TCNNGA 2 cut(s) 32, 259
HpyAV CCTTC 3 cut(s) 13, 52, 219
HpyCH4III ACNGT 1 cut(s) 69
HpyCH4V TGCA 4 cut(s) 290, 296, 333, 337
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 293
HpyF3I CTNAG 1 cut(s) 357
Hsp92II CATG 4 cut(s) 83, 148, 256, 337
LmnI GCTCC 1 cut(s) 284
LpnPI CCDG 4 cut(s) 17, 54, 193, 266
Lsp1109I GCAGC 1 cut(s) 274
MboII GAAGA 1 cut(s) 56
MfeI CAATTG 1 cut(s) 197
MluCI AATT 1 cut(s) 197
MlyI GAGTC 2 cut(s) 56, 143
MnlI CCTC 3 cut(s) 61, 202, 255
MseI TTAA 2 cut(s) 125, 240
MunI CAATTG 1 cut(s) 197
MwoI GCNNNNNNNGC 2 cut(s) 83, 293
NlaIII CATG 4 cut(s) 83, 148, 256, 337
NspI RCATGY 1 cut(s) 337
PaeI GCATGC 1 cut(s) 337
PkrI GCNGC 1 cut(s) 289
PleI GAGTC 2 cut(s) 55, 143
PpsI GAGTC 2 cut(s) 55, 143
RsaI GTAC 1 cut(s) 178
RsaNI GTAC 1 cut(s) 177
SaqAI TTAA 2 cut(s) 125, 240
SatI GCNGC 1 cut(s) 288
SchI GAGTC 2 cut(s) 56, 143
SetI ASST 6 cut(s) 43, 185, 226, 266, 289, 363
SmiI ATTTAAAT 1 cut(s) 126
SmlI CTYRAG 1 cut(s) 259
SmoI CTYRAG 1 cut(s) 259
SphI GCATGC 1 cut(s) 337
Sse9I AATT 1 cut(s) 197
SspI AATATT 2 cut(s) 130, 229
SwaI ATTTAAAT 1 cut(s) 126
TaaI ACNGT 1 cut(s) 69
TaqI TCGA 1 cut(s) 341
TasI AATT 1 cut(s) 197
Tru1I TTAA 2 cut(s) 125, 240
Tru9I TTAA 2 cut(s) 125, 240
TscAI CASTG 1 cut(s) 72
TseI GCWGC 1 cut(s) 287
TspRI CASTG 1 cut(s) 72
XceI RCATGY 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.