Rmu_sc0003665.1_g000003

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003665.1
OG0000508
Physical Location & Seq
Reverse (-)
10994 .. 16947
5954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003665.1_g000003.1.cds

Sequence Viewer

Length: 2304 bp
atggtgttgaacaagcacagtgtgtctattccattacggatatctattccttttaattctctatgggcgtgtgatgtcttcctaagttgcgaccatgaagacatcttctccgaccacttgtaccacaaattgcagtctcgaggaatcagtgttttccacgatggccaagaatcgcaaagaaacacaactcctcttgagctcttcgttgcaatcgaagaatcgaggtttgccgttattgttctctcgcaaaactatgcttcttcgccccggcgcttgaatgaactttcaaaaattctagagtgcatgaaagataggaacaggattctgccggtatttcgtgatgttaatctgttccatgtccaaaaacaaaaaggggcttttgagaaagcatttgacaagcatgaagaacggtttcaggatgacttggaaaaggttcgagcctggagagatgctttaacccaagtgtgcaatttcgctggatggactaccaatgataggaatgaagtacaggttatagaagaaattactgaagcactgtggaacaaactacattcaagaatcagtccaacggaaaaactgcagccgacatccacacgcaacttggtcgcattcactagcgttaatgttagtgaggactaccgtgaccataaccatccaatacacattacagatatgacgccttcttcagtagagtggaactttttgatcactaaccttggcctagagattttggcagctgcttttgatcaggcttcctcgtcaagttttgccatatggactgaagtgatgatttggttttatgatccaaccaattgcaaaagaactcacagttggatcattggaaagtactattcaggattacagttccttttctttcacataaccatttcattaagcaagggggctggagtggaggtcgttcgccatggatatcaaacttccaccaaaccatataatattggcttggaaaatgacttggaaaccacatggtcaaacttcgtggtatatatagcaccaaaaagaaaaaaactaggtgcagtaaacacaactcctcttgagctcttttgtgcaatcgaagaactgaggtttgccgttattgttctcttgcaaaactatgcttcttcaccccggcgcttgaataaactttcaaaaattcttgaatgcatgaaagataggaacaggattctgccaatatttcatgatgttaatctgttccatgtccaaaaacaaagagggacttttgagaaagcatttgacaagcatgaagaaaggtttcaggatgatttggaaaagtttcaagcctggagagatgctttgaccaaagtgtgcaattttgctggatggacttccaatgataggaatgaagtacaggttatagaagaaattactgaagcactgtggaacaaactacattctagactcagtccaatggaaaaactgcatccaacatccacacacaacttggtcgcattcactagcattagtgttaatgaggactaccgtgaccataaccatccaatacacattacagatatgacggctacttcagtagagtggaacttttttatcactaaccttggcctagagagtcagctgcttttgatcaggcttcctcctcaagtaattaagccacactatgcagtatttggtatgctgttttctattgcagcctttcggttctcttcatcgattgcgcattcaagctcatcgggaggcgccgcgacgtgtttgggcctccggcctcaccgaagtcttgggtatgctgccggacgggtctctaatctgatcagtttcgacggtgcttcatgggtggtttgtgctcaagagttcctgacggcgttttggcttatgtctctggctgcatctctttccggcggtgtggtcgtactgagcaagattggcggctgggttctcaatcgacgatggtggggcaggcgttgtgggagtaggcaaattctgctgggcctgcaattaaggcgattaactccgcagtacccccccttctcctctagccgacggtcaaactccaggtcaacgctccaaggaagcttctcgattgttcccaactctgatccgtacagcgagagctctggcggcgtgggtggcgtagcggtttgggtcgacgcggctggggtcttcgtagatcttggcgtcaccagtcgtggcagagggggtcgggttgaggtgctggatttgtggagtacgacatggggtcagcaggtgatgggccgggaccaagcccgtttgatggtctttggcagtagacctctcttgggcgctgttgggctcactattttgggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

767

Amino Acids

86.97

Weight (kDa)

8.51

Isoelectric Point (pI)

53.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000508)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g06570 FvH4_2g06640 FvH4_2g14130 FvH4_2g14140 FvH4_2g14140 FvH4_2g36090 FvH4_2g36090 FvH4_2g36100
malus_domestica MD11G1218200.v1.1 MD15G1057100.v1.1 MD15G1057200.v1.1
prunus_persica Prupe.1G197200_v2.0.a1 Prupe.1G197200_v2.0.a1 Prupe.1G197200_v2.0.a1 Prupe.4G127700_v2.0.a1 Prupe.5G011700_v2.0.a1 Prupe.5G011800_v2.0.a1 Prupe.5G011800_v2.0.a1 Prupe.5G012300_v2.0.a1 Prupe.5G012300_v2.0.a1 Prupe.5G012400_v2.0.a1 Prupe.5G012500_v2.0.a1 Prupe.5G012500_v2.0.a1 Prupe.5G012500_v2.0.a1 Prupe.5G012700_v2.0.a1 Prupe.5G012700_v2.0.a1 Prupe.5G012700_v2.0.a1 Prupe.5G012700_v2.0.a1 Prupe.5G012700_v2.0.a1 Prupe.5G012700_v2.0.a1 Prupe.5G012700_v2.0.a1 Prupe.5G012700_v2.0.a1 Prupe.5G012700_v2.0.a1 Prupe.5G012700_v2.0.a1 Prupe.8G119700_v2.0.a1 Prupe.8G119700_v2.0.a1
pyrus_communis pycom02g13080 pycom05g07020 pycom15g05370 pycom15g05380
rosa_chinensis RchiOBHm_Chr1g0372601 RchiOBHm_Chr6g0258611 RchiOBHm_Chr6g0276221 RchiOBHm_Chr6g0276231 RchiOBHm_Chr6g0276251 RchiOBHm_Chr6g0276271 RchiOBHm_Chr6g0276281 RchiOBHm_Chr6g0276291
rosa_laevigata RLG00000013406 RLG00000013407 RLG00000013408 RLG00000013617
rosa_multiflora Rmu_sc0001663.1_g000017 Rmu_sc0003665.1_g000003 Rmu_sc0004048.1_g000003 Rmu_sc0004048.1_g000006 Rmu_sc0004048.1_g000008 Rmu_sc0004049.1_g000006 Rmu_sc0004049.1_g000008 Rmu_sc0004049.1_g000010 Rmu_ssc0000213.1_g000005
rosa_roxburghii Rroxscaffold_178G00437490 Rroxscaffold_7G00192430 Rroxscaffold_7G00192440 Rroxscaffold_7G00192480 Rroxscaffold_7G00205750
rosa_rugosa Rorug05G0581900 Rorug05G0582500 Rorug06G0074900 Rorug06G0099400 Rorug06G0099600
rosa_samantha Rh6AG098600 Rh6AG190000 Rh6AG210800 Rh6AG210900 Rh6BG090400 Rh6BG193400 Rh6BG215000 Rh6BG215100 Rh6CG087300 Rh6DG081500 Rh6DG184600 Rh6DG207700
rosa_wichuraiana Rw6G008540 Rw6G018370 Rw6G018380 Rw6G018410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2209
Acc16I TGCGCA 1 cut(s) 1695
Acc36I ACCTGC 1 cut(s) 2209
AccB1I GGYRCC 1 cut(s) 1715
AccI GTMKAC 2 cut(s) 2121, 2263
AccII CGCG 2 cut(s) 1721, 2126
AciI CCGC 7 cut(s) 1719, 1875, 1902, 1988, 2094, 2111, 2126
AclWI GGATC 3 cut(s) 797, 842, 2066
AcoI YGGCCR 1 cut(s) 163
AcsI RAATTY 3 cut(s) 291, 1152, 1953
AcuI CTGAAG 5 cut(s) 549, 669, 801, 1410, 1530
AcyI GRCGYC 3 cut(s) 677, 1716, 2151
AdeI CACNNNGTG 1 cut(s) 22
AfaI GTAC 8 cut(s) 122, 507, 848, 1368, 1887, 1994, 2078, 2203
AfiI CCNNNNNNNGG 4 cut(s) 495, 1356, 2248, 2273
AflIII ACRYGT 1 cut(s) 1724
AgsI TTSAA 9 cut(s) 10, 277, 288, 555, 1138, 1149, 1160, 1298, 1701
AhdI GACNNNNNGTC 1 cut(s) 2211
AjiI CACGTC 1 cut(s) 1725
AjnI CCWGG 3 cut(s) 440, 1301, 2027
AjuI GAANNNNNNNTTGG 2 cut(s) 814, 846
AluBI AGCT 7 cut(s) 199, 737, 1060, 1594, 1704, 2049, 2088
AluI AGCT 7 cut(s) 199, 737, 1060, 1594, 1704, 2049, 2088
Alw21I GWGCWC 4 cut(s) 201, 1062, 1822, 2090
Alw26I GTCTC 3 cut(s) 141, 1780, 1857
AlwI GGATC 3 cut(s) 797, 842, 2066
Ama87I CYCGRG 1 cut(s) 138
AoxI GGCC 7 cut(s) 163, 718, 1579, 1732, 1739, 1963, 2227
ApeKI GCWGC 7 cut(s) 580, 734, 737, 1594, 1667, 1763, 1859
ApoI RAATTY 3 cut(s) 291, 1152, 1953
ArsI GACNNNNNNTTYG 2 cut(s) 2015, 2047
Asp700I GAANNNNTTC 4 cut(s) 411, 432, 1272, 1293
AspLEI GCGC 5 cut(s) 273, 1134, 1696, 1718, 2279
AspS9I GGNCC 4 cut(s) 1732, 1963, 2227, 2233
AsuC2I CCSGG 3 cut(s) 268, 1129, 2231
AsuHPI GGTGA 4 cut(s) 1116, 1736, 2146, 2233
AvaI CYCGRG 1 cut(s) 138
AvaII GGWCC 1 cut(s) 2233
BalI TGGCCA 1 cut(s) 165
BanI GGYRCC 1 cut(s) 1715
BanII GRGCYC 4 cut(s) 201, 1062, 2090, 2289
BarI GAAGNNNNNNTAC 2 cut(s) 1985, 2017
BbsI GAAGAC 3 cut(s) 70, 105, 2128
Bbv12I GWGCWC 4 cut(s) 201, 1062, 1822, 2090
BbvI GCAGC 7 cut(s) 592, 724, 746, 1581, 1679, 1750, 1846
BccI CCATC 8 cut(s) 155, 474, 660, 1335, 1521, 1917, 2218, 2242
BceAI ACGGC 4 cut(s) 215, 1076, 1554, 1851
BcgI CGANNNNNNTGC 2 cut(s) 586, 620
BciT130I CCWGG 3 cut(s) 442, 1303, 2029
BclI TGATCA 4 cut(s) 705, 745, 1602, 1785
BcnI CCSGG 3 cut(s) 268, 1129, 2231
BcoDI GTCTC 3 cut(s) 141, 1780, 1857
BfaI CTAG 9 cut(s) 296, 615, 722, 1031, 1416, 1476, 1583, 2010, 2302
BfmI CTRYAG 1 cut(s) 578
BfoI RGCGCY 4 cut(s) 274, 1135, 1719, 2280
BfuAI ACCTGC 1 cut(s) 2209
BglII AGATCT 1 cut(s) 2143
BmcAI AGTACT 1 cut(s) 848
Bme1390I CCNGG 6 cut(s) 268, 442, 1129, 1303, 2029, 2231
Bme18I GGWCC 1 cut(s) 2233
BmeRI GACNNNNNGTC 1 cut(s) 2211
BmeT110I CYCGRG 1 cut(s) 138
BmgBI CACGTC 1 cut(s) 1725
BmgT120I GGNCC 4 cut(s) 1732, 1963, 2227, 2233
BmiI GGNNCC 2 cut(s) 1717, 2234
BmrFI CCNGG 6 cut(s) 268, 442, 1129, 1303, 2029, 2231
BmsI GCATC 4 cut(s) 439, 1300, 1450, 1871
BpiI GAAGAC 3 cut(s) 70, 105, 2128
BpmI CTGGAG 4 cut(s) 463, 927, 1324, 2011
BpuEI CTTGAG 4 cut(s) 215, 1076, 1602, 1806
BpuMI CCSGG 3 cut(s) 268, 1129, 2231
Bsa29I ATCGAT 1 cut(s) 1688
BsaBI GATNNNNATC 2 cut(s) 345, 1206
BsaHI GRCGYC 3 cut(s) 677, 1716, 2151
BsaI GGTCTC 1 cut(s) 1780
BsaJI CCNNGG 6 cut(s) 266, 715, 925, 1127, 1576, 2041
BsaXI ACNNNNNCTCC 4 cut(s) 92, 122, 900, 930
Bsc4I CCNNNNNNNGG 4 cut(s) 495, 1356, 2248, 2273
Bse118I RCCGGY 1 cut(s) 328
Bse1I ACTGG 1 cut(s) 2157
Bse8I GATNNNNATC 2 cut(s) 345, 1206
BseBI CCWGG 3 cut(s) 442, 1303, 2029
BseCI ATCGAT 1 cut(s) 1688
BseDI CCNNGG 6 cut(s) 266, 715, 925, 1127, 1576, 2041
BseGI GGATG 9 cut(s) 424, 485, 587, 652, 1285, 1346, 1441, 1448, 1513
BseJI GATNNNNATC 2 cut(s) 345, 1206
BseLI CCNNNNNNNGG 4 cut(s) 495, 1356, 2248, 2273
BseMII CTCAG 3 cut(s) 1073, 1435, 1880
BseNI ACTGG 1 cut(s) 2157
BseRI GAGGAG 4 cut(s) 180, 1041, 1605, 1996
BseXI GCAGC 7 cut(s) 592, 724, 746, 1581, 1679, 1750, 1846
BseYI CCCAGC 3 cut(s) 1905, 1960, 2129
BsgI GTGCAG 1 cut(s) 1056
Bsh1236I CGCG 2 cut(s) 1721, 2126
BshFI GGCC 7 cut(s) 165, 720, 1581, 1734, 1741, 1965, 2229
BshNI GGYRCC 1 cut(s) 1715
BshVI ATCGAT 1 cut(s) 1688
BsiHKAI GWGCWC 4 cut(s) 201, 1062, 1822, 2090
BsiHKCI CYCGRG 1 cut(s) 138
BsiSI CCGG 7 cut(s) 268, 329, 1129, 1738, 1767, 1872, 2230
BslFI GGGAC 2 cut(s) 1249, 2246
BslI CCNNNNNNNGG 4 cut(s) 495, 1356, 2248, 2273
BsmAI GTCTC 3 cut(s) 141, 1780, 1857
BsmFI GGGAC 2 cut(s) 1249, 2246
BsmI GAATGC 4 cut(s) 608, 1166, 1469, 1696
BsnI GGCC 7 cut(s) 165, 720, 1581, 1734, 1741, 1965, 2229
Bso31I GGTCTC 1 cut(s) 1780
BsoBI CYCGRG 1 cut(s) 138
Bsp1286I GDGCHC 5 cut(s) 201, 1062, 1822, 2090, 2289
Bsp143I GATC 8 cut(s) 705, 745, 802, 834, 1602, 1785, 2071, 2143
Bsp19I CCATGG 1 cut(s) 925
BspACI CCGC 7 cut(s) 1719, 1875, 1902, 1988, 2094, 2111, 2126
BspANI GGCC 7 cut(s) 165, 720, 1581, 1734, 1741, 1965, 2229
BspCNI CTCAG 3 cut(s) 1074, 1434, 1881
BspDI ATCGAT 1 cut(s) 1688
BspFNI CGCG 2 cut(s) 1721, 2126
BspHI TCATGA 1 cut(s) 1198
BspLI GGNNCC 2 cut(s) 1717, 2234
BspMAI CTGCAG 1 cut(s) 582
BspMI ACCTGC 1 cut(s) 2209
BspPI GGATC 3 cut(s) 797, 842, 2066
BspQI GCTCTTC 1 cut(s) 206
BspT107I GGYRCC 1 cut(s) 1715
BspTNI GGTCTC 1 cut(s) 1780
BsrFI RCCGGY 1 cut(s) 328
BsrI ACTGG 1 cut(s) 2157
BssAI RCCGGY 1 cut(s) 328
BssECI CCNNGG 6 cut(s) 266, 715, 925, 1127, 1576, 2041
BssMI GATC 8 cut(s) 705, 745, 802, 834, 1602, 1785, 2071, 2143
BssNI GRCGYC 3 cut(s) 677, 1716, 2151
BssT1I CCWWGG 4 cut(s) 715, 925, 1576, 2041
Bst2UI CCWGG 3 cut(s) 442, 1303, 2029
Bst6I CTCTTC 2 cut(s) 206, 1687
BstACI GRCGYC 3 cut(s) 677, 1716, 2151
BstAPI GCANNNNNTGC 1 cut(s) 1957
BstC8I GCNNGC 2 cut(s) 1934, 1967
BstDEI CTNAG 4 cut(s) 83, 1082, 1421, 1889
BstDSI CCRYGG 1 cut(s) 925
BstF5I GGATG 9 cut(s) 424, 485, 587, 652, 1285, 1346, 1441, 1448, 1513
BstFNI CGCG 2 cut(s) 1721, 2126
BstH2I RGCGCY 4 cut(s) 274, 1135, 1719, 2280
BstHHI GCGC 5 cut(s) 273, 1134, 1696, 1718, 2279
BstKTI GATC 8 cut(s) 708, 748, 805, 837, 1605, 1788, 2074, 2146
BstMAI GTCTC 3 cut(s) 141, 1780, 1857
BstMBI GATC 8 cut(s) 705, 745, 802, 834, 1602, 1785, 2071, 2143
BstMWI GCNNNNNNNGC 6 cut(s) 1899, 1957, 1966, 1975, 2094, 2103
BstNI CCWGG 3 cut(s) 442, 1303, 2029
BstSCI CCNGG 6 cut(s) 266, 440, 1127, 1301, 2027, 2229
BstSFI CTRYAG 1 cut(s) 578
BstUI CGCG 2 cut(s) 1721, 2126
BstV1I GCAGC 7 cut(s) 592, 724, 746, 1581, 1679, 1750, 1846
BstV2I GAAGAC 3 cut(s) 70, 105, 2128
BstX2I RGATCY 1 cut(s) 2143
BstYI RGATCY 1 cut(s) 2143
Bsu15I ATCGAT 1 cut(s) 1688
BsuRI GGCC 7 cut(s) 165, 720, 1581, 1734, 1741, 1965, 2229
BsuTUI ATCGAT 1 cut(s) 1688
BtgI CCRYGG 1 cut(s) 925
BtrI CACGTC 1 cut(s) 1725
BtsCI GGATG 9 cut(s) 424, 485, 587, 652, 1285, 1346, 1441, 1448, 1513
BtsIMutI CAGTG 4 cut(s) 25, 154, 533, 1394
BveI ACCTGC 1 cut(s) 2209
Cac8I GCNNGC 2 cut(s) 1934, 1967
CciI TCATGA 1 cut(s) 1198
CfoI GCGC 5 cut(s) 273, 1134, 1696, 1718, 2279
Cfr10I RCCGGY 1 cut(s) 328
Cfr13I GGNCC 4 cut(s) 1732, 1963, 2227, 2233
ClaI ATCGAT 1 cut(s) 1688
CseI GACGC 3 cut(s) 685, 2132, 2140
Csp6I GTAC 8 cut(s) 121, 506, 847, 1367, 1886, 1993, 2077, 2202
CspCI CAANNNNNGTGG 2 cut(s) 981, 1016
CviQI GTAC 8 cut(s) 121, 506, 847, 1367, 1886, 1993, 2077, 2202
DdeI CTNAG 4 cut(s) 83, 1082, 1421, 1889
DinI GGCGCC 1 cut(s) 1717
DpnI GATC 8 cut(s) 707, 747, 804, 836, 1604, 1787, 2073, 2145
DpnII GATC 8 cut(s) 705, 745, 802, 834, 1602, 1785, 2071, 2143
DraIII CACNNNGTG 1 cut(s) 22
DriI GACNNNNNGTC 1 cut(s) 2211
EaeI YGGCCR 1 cut(s) 163
Eam1104I CTCTTC 2 cut(s) 206, 1687
Eam1105I GACNNNNNGTC 1 cut(s) 2211
EarI CTCTTC 2 cut(s) 206, 1687
Ecl136II GAGCTC 3 cut(s) 199, 1060, 2088
Eco130I CCWWGG 4 cut(s) 715, 925, 1576, 2041
Eco24I GRGCYC 4 cut(s) 201, 1062, 2090, 2289
Eco31I GGTCTC 1 cut(s) 1780
Eco32I GATATC 2 cut(s) 42, 932
Eco47I GGWCC 1 cut(s) 2233
Eco53kI GAGCTC 3 cut(s) 199, 1060, 2088
Eco57I CTGAAG 5 cut(s) 549, 669, 801, 1410, 1530
Eco88I CYCGRG 1 cut(s) 138
EcoICRI GAGCTC 3 cut(s) 199, 1060, 2088
EcoRII CCWGG 3 cut(s) 440, 1301, 2027
EcoRV GATATC 2 cut(s) 42, 932
EcoT14I CCWWGG 4 cut(s) 715, 925, 1576, 2041
EcoT22I ATGCAT 1 cut(s) 1166
EcoT38I GRGCYC 4 cut(s) 201, 1062, 2090, 2289
EgeI GGCGCC 1 cut(s) 1717
EheI GGCGCC 1 cut(s) 1717
ErhI CCWWGG 4 cut(s) 715, 925, 1576, 2041
FalI AAGNNNNNCTT 2 cut(s) 1222, 1254
FaqI GGGAC 2 cut(s) 1249, 2246
FauNDI CATATG 1 cut(s) 773
FbaI TGATCA 4 cut(s) 705, 745, 1602, 1785
FblI GTMKAC 2 cut(s) 2121, 2263
FokI GGATG 9 cut(s) 431, 492, 574, 639, 1292, 1353, 1428, 1435, 1500
FriOI GRGCYC 4 cut(s) 201, 1062, 2090, 2289
FspBI CTAG 9 cut(s) 296, 615, 722, 1031, 1416, 1476, 1583, 2010, 2302
FspI TGCGCA 1 cut(s) 1695
GlaI GCGC 5 cut(s) 272, 1133, 1695, 1717, 2278
GsaI CCCAGC 3 cut(s) 1909, 1964, 2133
GsuI CTGGAG 4 cut(s) 463, 927, 1324, 2011
HaeII RGCGCY 4 cut(s) 274, 1135, 1719, 2280
HaeIII GGCC 7 cut(s) 165, 720, 1581, 1734, 1741, 1965, 2229
HapII CCGG 7 cut(s) 268, 329, 1129, 1738, 1767, 1872, 2230
HgaI GACGC 3 cut(s) 685, 2132, 2140
HhaI GCGC 5 cut(s) 273, 1134, 1696, 1718, 2279
Hin1I GRCGYC 3 cut(s) 677, 1716, 2151
Hin6I GCGC 5 cut(s) 271, 1132, 1694, 1716, 2277
HinP1I GCGC 5 cut(s) 271, 1132, 1694, 1716, 2277
HincII GTYRAC 2 cut(s) 2034, 2122
HindII GTYRAC 2 cut(s) 2034, 2122
HindIII AAGCTT 1 cut(s) 2047
HinfI GANTC 8 cut(s) 144, 170, 218, 322, 558, 1183, 1419, 1588
HpaII CCGG 7 cut(s) 268, 329, 1129, 1738, 1767, 1872, 2230
HphI GGTGA 4 cut(s) 1116, 1736, 2146, 2233
Hpy166II GTNNAC 4 cut(s) 1042, 2034, 2122, 2264
Hpy188I TCNGA 3 cut(s) 112, 1785, 2071
Hpy8I GTNNAC 4 cut(s) 1042, 2034, 2122, 2264
Hpy99I CGWCG 5 cut(s) 1726, 1799, 1923, 2019, 2126
HpyAV CCTTC 2 cut(s) 690, 2011
HpyCH4IV ACGT 1 cut(s) 1724
HpyF10VI GCNNNNNNNGC 6 cut(s) 1899, 1957, 1966, 1975, 2094, 2103
HpyF3I CTNAG 4 cut(s) 83, 1082, 1421, 1889
HpySE526I ACGT 1 cut(s) 1724
Hsp92I GRCGYC 3 cut(s) 677, 1716, 2151
HspAI GCGC 5 cut(s) 271, 1132, 1694, 1716, 2277
KasI GGCGCC 1 cut(s) 1715
Ksp22I TGATCA 4 cut(s) 705, 745, 1602, 1785
Kzo9I GATC 8 cut(s) 705, 745, 802, 834, 1602, 1785, 2071, 2143
LguI GCTCTTC 1 cut(s) 206
LmnI GCTCC 1 cut(s) 2043
Lsp1109I GCAGC 7 cut(s) 592, 724, 746, 1581, 1679, 1750, 1846
LweI GCATC 4 cut(s) 439, 1300, 1450, 1871
MaeI CTAG 9 cut(s) 296, 615, 722, 1031, 1416, 1476, 1583, 2010, 2302
MaeII ACGT 1 cut(s) 1724
MaeIII GTNAC 3 cut(s) 641, 1502, 2152
MalI GATC 8 cut(s) 707, 747, 804, 836, 1604, 1787, 2073, 2145
MboI GATC 8 cut(s) 705, 745, 802, 834, 1602, 1785, 2071, 2143
MfeI CAATTG 1 cut(s) 811
MflI RGATCY 1 cut(s) 2143
MhlI GDGCHC 5 cut(s) 201, 1062, 1822, 2090, 2289
MlsI TGGCCA 1 cut(s) 165
MluNI TGGCCA 1 cut(s) 165
Mly113I GGCGCC 1 cut(s) 1716
MlyI GAGTC 2 cut(s) 1413, 1597
MmeI TCCRAC 5 cut(s) 135, 590, 812, 830, 1469
Mox20I TGGCCA 1 cut(s) 165
Mph1103I ATGCAT 1 cut(s) 1166
MroXI GAANNNNTTC 4 cut(s) 411, 432, 1272, 1293
MscI TGGCCA 1 cut(s) 165
Msp20I TGGCCA 1 cut(s) 165
MspA1I CMGCKG 2 cut(s) 737, 1594
MspI CCGG 7 cut(s) 268, 329, 1129, 1738, 1767, 1872, 2230
MspR9I CCNGG 6 cut(s) 268, 442, 1129, 1303, 2029, 2231
MunI CAATTG 1 cut(s) 811
Mva1269I GAATGC 4 cut(s) 608, 1166, 1469, 1696
MvaI CCWGG 3 cut(s) 442, 1303, 2029
MvnI CGCG 2 cut(s) 1721, 2126
MwoI GCNNNNNNNGC 6 cut(s) 1899, 1957, 1966, 1975, 2094, 2103
NarI GGCGCC 1 cut(s) 1716
NciI CCSGG 3 cut(s) 268, 1129, 2231
NcoI CCATGG 1 cut(s) 925
NdeI CATATG 1 cut(s) 773
NdeII GATC 8 cut(s) 705, 745, 802, 834, 1602, 1785, 2071, 2143
NlaIV GGNNCC 2 cut(s) 1717, 2234
NmuCI GTSAC 3 cut(s) 641, 1502, 2152
NsbI TGCGCA 1 cut(s) 1695
NsiI ATGCAT 1 cut(s) 1166
PaeR7I CTCGAG 1 cut(s) 138
PagI TCATGA 1 cut(s) 1198
PaqCI CACCTGC 1 cut(s) 2209
PciSI GCTCTTC 1 cut(s) 206
PcsI WCGNNNNNNNCGW 1 cut(s) 210
PctI GAATGC 4 cut(s) 608, 1166, 1469, 1696
PdmI GAANNNNTTC 4 cut(s) 411, 432, 1272, 1293
PfeI GAWTC 6 cut(s) 144, 170, 218, 322, 558, 1183
PflFI GACNNNGTC 1 cut(s) 1422
PleI GAGTC 2 cut(s) 1413, 1596
PluTI GGCGCC 1 cut(s) 1719
PpsI GAGTC 2 cut(s) 1413, 1596
Psp124BI GAGCTC 3 cut(s) 201, 1062, 2090
Psp6I CCWGG 3 cut(s) 440, 1301, 2027
PspFI CCCAGC 3 cut(s) 1905, 1960, 2129
PspGI CCWGG 3 cut(s) 440, 1301, 2027
PspN4I GGNNCC 2 cut(s) 1717, 2234
PspPI GGNCC 4 cut(s) 1732, 1963, 2227, 2233
PstI CTGCAG 1 cut(s) 582
PsuI RGATCY 1 cut(s) 2143
PsyI GACNNNGTC 1 cut(s) 1422
PvuII CAGCTG 2 cut(s) 737, 1594
RsaI GTAC 8 cut(s) 122, 507, 848, 1368, 1887, 1994, 2078, 2203
RsaNI GTAC 8 cut(s) 121, 506, 847, 1367, 1886, 1993, 2077, 2202
SacI GAGCTC 3 cut(s) 201, 1062, 2090
SalI GTCGAC 1 cut(s) 2120
SapI GCTCTTC 1 cut(s) 206
Sau3AI GATC 8 cut(s) 705, 745, 802, 834, 1602, 1785, 2071, 2143
Sau96I GGNCC 4 cut(s) 1732, 1963, 2227, 2233
ScaI AGTACT 1 cut(s) 848
SchI GAGTC 2 cut(s) 1413, 1597
ScrFI CCNGG 6 cut(s) 268, 442, 1129, 1303, 2029, 2231
SduI GDGCHC 5 cut(s) 201, 1062, 1822, 2090, 2289
SfaNI GCATC 4 cut(s) 439, 1300, 1450, 1871
SfcI CTRYAG 1 cut(s) 578
SfoI GGCGCC 1 cut(s) 1717
Sfr274I CTCGAG 1 cut(s) 138
SinI GGWCC 1 cut(s) 2233
SlaI CTCGAG 1 cut(s) 138
SmlI CTYRAG 5 cut(s) 138, 194, 1055, 1617, 1821
SmoI CTYRAG 5 cut(s) 138, 194, 1055, 1617, 1821
SsiI CCGC 7 cut(s) 1719, 1875, 1902, 1988, 2094, 2111, 2126
SspDI GGCGCC 1 cut(s) 1715
SspI AATATT 2 cut(s) 958, 1194
SspMI CTAG 9 cut(s) 296, 615, 722, 1031, 1416, 1476, 1583, 2010, 2302
SstI GAGCTC 3 cut(s) 201, 1062, 2090
StyD4I CCNGG 6 cut(s) 266, 440, 1127, 1301, 2027, 2229
StyI CCWWGG 4 cut(s) 715, 925, 1576, 2041
TaiI ACGT 1 cut(s) 1727
TatI WGTACW 3 cut(s) 505, 846, 1366
TauI GCSGC 4 cut(s) 1721, 1905, 2097, 2129
TfiI GAWTC 6 cut(s) 144, 170, 218, 322, 558, 1183
TscAI CASTG 4 cut(s) 25, 154, 540, 1401
TseFI GTSAC 3 cut(s) 641, 1502, 2152
TseI GCWGC 7 cut(s) 580, 734, 737, 1594, 1667, 1763, 1859
Tsp45I GTSAC 3 cut(s) 641, 1502, 2152
TspGWI ACGGA 3 cut(s) 52, 584, 2064
TspRI CASTG 4 cut(s) 25, 154, 540, 1401
Tth111I GACNNNGTC 1 cut(s) 1422
VpaK11BI GGWCC 1 cut(s) 2233
XapI RAATTY 3 cut(s) 291, 1152, 1953
XbaI TCTAGA 2 cut(s) 295, 1415
XcmI CCANNNNNNNNNTGG 2 cut(s) 598, 1459
XhoI CTCGAG 1 cut(s) 138
XmiI GTMKAC 2 cut(s) 2121, 2263
XmnI GAANNNNTTC 4 cut(s) 411, 432, 1272, 1293
XspI CTAG 9 cut(s) 296, 615, 722, 1031, 1416, 1476, 1583, 2010, 2302
ZrmI AGTACT 1 cut(s) 848
Zsp2I ATGCAT 1 cut(s) 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.