Rh6DG402300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
59085707 .. 59086024
318 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG402300.1

Sequence Viewer

Length: 318 bp
ATGGGTTTCAGGTATCTTCTTGCTGGCAGGAGCGATGGTGGGGTACTGGTGGTGGTTTGCAGCGATGGCATACCTGTAGATGACGGGGACAACTACGGACAACTACGGAGGAGATTTTCCTCTTCTCTAGGGTTTGTTCTGGTTGGTTTGGTTGGGCTGCTTATCCAATATCGGTTTTGGAATGGATCAGAATATGATTGGGCTGCATGGGCCTTCTTCTGGGCTGAGGCTGATTGGAGCTTTTCTTTTTGGGAGGTTCTGCTGAATGGAAAGGGAGTGGATGGTGACAAGTCACCTTCTACTCCAACTATTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

105

Amino Acids

11.68

Weight (kDa)

4.48

Isoelectric Point (pI)

24.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 193
AfaI GTAC 1 cut(s) 45
AfiI CCNNNNNNNGG 1 cut(s) 219
AluBI AGCT 1 cut(s) 240
AluI AGCT 1 cut(s) 240
AlwI GGATC 1 cut(s) 193
AoxI GGCC 1 cut(s) 210
ApeKI GCWGC 3 cut(s) 60, 157, 203
AspS9I GGNCC 1 cut(s) 210
AsuHPI GGTGA 2 cut(s) 285, 296
BbvCI CCTCAGC 1 cut(s) 225
BbvI GCAGC 3 cut(s) 72, 144, 190
BccI CCATC 3 cut(s) 29, 59, 275
BfaI CTAG 1 cut(s) 128
BfmI CTRYAG 1 cut(s) 75
BisI GCNGC 3 cut(s) 61, 158, 204
BlsI GCNGC 3 cut(s) 62, 159, 205
BmgT120I GGNCC 1 cut(s) 210
Bpu10I CCTNAGC 1 cut(s) 225
BsaXI ACNNNNNCTCC 2 cut(s) 22, 52
Bsc4I CCNNNNNNNGG 1 cut(s) 219
Bse1I ACTGG 1 cut(s) 51
BseGI GGATG 1 cut(s) 286
BseLI CCNNNNNNNGG 1 cut(s) 219
BseMII CTCAG 1 cut(s) 216
BseNI ACTGG 1 cut(s) 51
BseRI GAGGAG 1 cut(s) 124
BseXI GCAGC 3 cut(s) 72, 144, 190
BshFI GGCC 1 cut(s) 212
BslFI GGGAC 1 cut(s) 101
BslI CCNNNNNNNGG 1 cut(s) 219
BsmFI GGGAC 1 cut(s) 101
BsnI GGCC 1 cut(s) 212
Bsp143I GATC 1 cut(s) 185
BspANI GGCC 1 cut(s) 212
BspCNI CTCAG 1 cut(s) 217
BspPI GGATC 1 cut(s) 193
BsrI ACTGG 1 cut(s) 51
BssMI GATC 1 cut(s) 185
Bst6I CTCTTC 1 cut(s) 127
BstC8I GCNNGC 1 cut(s) 25
BstDEI CTNAG 1 cut(s) 225
BstF5I GGATG 1 cut(s) 286
BstKTI GATC 1 cut(s) 188
BstMBI GATC 1 cut(s) 185
BstMWI GCNNNNNNNGC 2 cut(s) 66, 209
BstSFI CTRYAG 1 cut(s) 75
BstV1I GCAGC 3 cut(s) 72, 144, 190
BsuRI GGCC 1 cut(s) 212
BtgZI GCGATG 2 cut(s) 48, 78
BtsCI GGATG 1 cut(s) 286
Cac8I GCNNGC 1 cut(s) 25
Cfr13I GGNCC 1 cut(s) 210
Csp6I GTAC 1 cut(s) 44
CviAII CATG 1 cut(s) 207
CviJI RGCY 6 cut(s) 157, 203, 212, 224, 230, 240
CviKI_1 RGCY 6 cut(s) 157, 203, 212, 224, 230, 240
CviQI GTAC 1 cut(s) 44
DdeI CTNAG 1 cut(s) 225
DpnI GATC 1 cut(s) 187
DpnII GATC 1 cut(s) 185
Eam1104I CTCTTC 1 cut(s) 127
EarI CTCTTC 1 cut(s) 127
FaeI CATG 1 cut(s) 210
FaiI YATR 3 cut(s) 71, 195, 208
FaqI GGGAC 1 cut(s) 101
FatI CATG 1 cut(s) 206
Fnu4HI GCNGC 3 cut(s) 61, 158, 204
FokI GGATG 1 cut(s) 293
Fsp4HI GCNGC 3 cut(s) 61, 158, 204
FspBI CTAG 1 cut(s) 128
GluI GCNGC 3 cut(s) 61, 158, 204
HaeIII GGCC 1 cut(s) 212
Hin1II CATG 1 cut(s) 210
HphI GGTGA 2 cut(s) 285, 296
Hpy188I TCNGA 1 cut(s) 190
HpyAV CCTTC 2 cut(s) 223, 306
HpyCH4V TGCA 2 cut(s) 60, 206
HpyF10VI GCNNNNNNNGC 2 cut(s) 66, 209
HpyF3I CTNAG 1 cut(s) 225
Hsp92II CATG 1 cut(s) 210
Kzo9I GATC 1 cut(s) 185
LmnI GCTCC 2 cut(s) 30, 237
LpnPI CCDG 6 cut(s) 9, 13, 32, 87, 125, 205
Lsp1109I GCAGC 3 cut(s) 72, 144, 190
MaeI CTAG 1 cut(s) 128
MaeIII GTNAC 2 cut(s) 284, 291
MalI GATC 1 cut(s) 187
MboI GATC 1 cut(s) 185
MboII GAAGA 3 cut(s) 8, 114, 208
MnlI CCTC 4 cut(s) 102, 130, 220, 247
MwoI GCNNNNNNNGC 2 cut(s) 66, 209
NdeII GATC 1 cut(s) 185
NlaIII CATG 1 cut(s) 210
NmuCI GTSAC 2 cut(s) 284, 291
PkrI GCNGC 3 cut(s) 62, 159, 205
PspPI GGNCC 1 cut(s) 210
RsaI GTAC 1 cut(s) 45
RsaNI GTAC 1 cut(s) 44
SatI GCNGC 3 cut(s) 61, 158, 204
Sau3AI GATC 1 cut(s) 185
Sau96I GGNCC 1 cut(s) 210
SetI ASST 5 cut(s) 14, 76, 242, 258, 298
SfcI CTRYAG 1 cut(s) 75
SspMI CTAG 1 cut(s) 128
TseFI GTSAC 2 cut(s) 284, 291
TseI GCWGC 3 cut(s) 60, 157, 203
Tsp45I GTSAC 2 cut(s) 284, 291
TspGWI ACGGA 2 cut(s) 111, 121
XspI CTAG 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.