AT3G07820

Contains the following InterPro domains Pectin lyase fold virulence factor (InterPro IPR011050), Pectin lyase fold (InterPro IPR012334), Glycoside hydrolase, family 28 (InterPro IPR000743), Parallel beta-helix repeat (InterPro IPR006626)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000434
Physical Location & Seq
Reverse (-)
2496331 .. 2498095
1765 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G07820.1

Sequence Viewer

Length: 1176 bp
ATGGGTGGATATTTTGGAGTTTCTACAATTTTTATTATCTGTTTGTTGGGAATTTCAGCCAATGCTGAGGTATTCACCATTGGTTCTTCATCAGGTTCTGATATTACTCAGGCACTTCTGAAAGCATTCACATCGGCATGCCAATCTTCGTCACCAAGCAAAGTGGTGATCCCAAAAGGAGAGTTCAAGCTTGGTGAGATCGAGATGAGGGGTCCATGCAAAGCTCCCATTGAGGTCACCCTTCAAGGTACTGTCAAAGCTGACGGTAACGCTATCCAAGGGAAGGAAAAATGGGTCGTCTTCGGCAACATTGATGGCTTTAAGTTGAACGGAGGAGGAGCCTTCGACGGTGAAGGCAATGCAGCTTGGAGAGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCCATCAGTATAAGGTTTGACTTCATATTGAACTCTGAGATCAGAGACATATCCTCGATCGATGCCAAGAACTTCCACATCAACGTGTTGGGAGCCAAGAACATGACCATGAATAACATCAAGATCGTCGCCCCAGAAGACAGTCCCAACACTGATGGAATCCATTTGGGAAGAAGTGACGGAGTCAAGATCCTTAACTCTTTCATCTCCACCGGAGACGATTGTATCTCCGTCGGAGATGGGATGAAGAACCTTCACGTGGAGAAGGTCACATGCGGTCCGGGACACGGAATCAGTGTCGGGAGTCTTGGAAGGTACGGACACGAGCAAGATGTCAGCGGCATTAAGGTCATCAACTGCACTCTTCAAGAGACTGACAACGGGTTGAGGATCAAGACATGGCCCTCTGCAGCTTGCTCCACCACCGCATCCGATATTCATTTCGAGGATATTATCCTCAAGGACGTTAGCAACCCAATCCTCATCGACCAAGAGTACTGCCCTTGGAACCAGTGCAACAAGCAAAAAGCATCAACAATTAAGTTGGTGAACATTAGCTTCAAGAACATCAGAGGAACATCAGGGAACAAGGACGCGGTGAAGCTACTTTGCAGCAAGGGGTATCCGTGCCAGAACGTGGAGATTGGAGACATTGATATCAAGTACAATGGAGCAGATGGTCCAGCCACTTTCCATTGCTCAAACGTCAGTCCCAAAATCTTGGGATCTCAGAGCCCTAAAGCATGCAGCGCTCCAGCAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

391

Amino Acids

41.68

Weight (kDa)

7.03

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_28 PF00295 47 - 374 2.9e-115 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000434)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07820 AT3G07830 AT3G07840 AT5G48140
fragaria_vesca FvH4_1g26811 FvH4_2g02350 FvH4_6g41380 FvH4_6g41380 FvH4_6g41380 FvH4_6g41430 FvH4_6g41740 FvH4_6g43060 FvH4_7g02910
malus_domestica MD00G1117700.v1.1 MD00G1117800.v1.1 MD00G1117900.v1.1 MD09G1120000.v1.1 MD09G1120100.v1.1 MD09G1120200.v1.1 MD09G1120300.v1.1 MD12G1142000.v1.1 MD13G1218300.v1.1 MD13G1220100.v1.1 MD13G1220200.v1.1 MD16G1223300.v1.1 MD16G1223500.v1.1 MD16G1223600.v1.1 MD17G1110800.v1.1
prunus_persica Prupe.1G044900_v2.0.a1 Prupe.1G045000_v2.0.a1 Prupe.1G167700_v2.0.a1 Prupe.2G005600_v2.0.a1 Prupe.2G005700_v2.0.a1 Prupe.2G008600_v2.0.a1 Prupe.2G009200_v2.0.a1 Prupe.2G009300_v2.0.a1 Prupe.2G009400_v2.0.a1 Prupe.3G109100_v2.0.a1 Prupe.3G109200_v2.0.a1 Prupe.3G109400_v2.0.a1 Prupe.3G109500_v2.0.a1 Prupe.3G109700_v2.0.a1 Prupe.3G203300_v2.0.a1 Prupe.3G203600_v2.0.a1 Prupe.3G203900_v2.0.a1 Prupe.3G204000_v2.0.a1 Prupe.3G204100_v2.0.a1 Prupe.3G204200_v2.0.a1
pyrus_communis pycom09g04480 pycom09g04490 pycom09g04500 pycom12g13680
rosa_chinensis RchiOBHm_Chr1g0323871 RchiOBHm_Chr2g0156921 RchiOBHm_Chr2g0159061 RchiOBHm_Chr6g0246271 RchiOBHm_Chr6g0246281
rosa_laevigata RLG00000015266 RLG00000020954 RLG00000021134 RLG00000030246 RLG00000030250 RLG00000030295
rosa_multiflora Rmu_co8098394.1_g000001 Rmu_co8404671.1_g000001 Rmu_sc0000507.1_g000021 Rmu_sc0001066.1_g000011 Rmu_sc0001066.1_g000015 Rmu_sc0009451.1_g000001 Rmu_ssc0000408.1_g000005
rosa_roxburghii Rroxscaffold_2G00090810 Rroxscaffold_2G00092580 Rroxscaffold_4G00326280 Rroxscaffold_7G00214720
rosa_rugosa Rorug01G0040400 Rorug02G0457200 Rorug05G0520000
rosa_samantha Rh1AG057700 Rh1BG048800 Rh1CG059100 Rh1DG063000 Rh2AG522900 Rh2BG536200 Rh2BG553200 Rh2CG507800 Rh2DG545200 Rh6AG034100 Rh6BG029300 Rh6DG028700
rosa_wichuraiana Rw0G023110 Rw1G004930 Rw2G043170 Rw2G044730 Rw6G002760 Rw6G002920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1048
AccII CGCG 1 cut(s) 1007
AciI CCGC 4 cut(s) 687, 750, 837, 1007
AclWI GGATC 4 cut(s) 163, 595, 809, 1144
AcsI RAATTY 1 cut(s) 51
AcvI CACGTG 1 cut(s) 670
AfaI GTAC 4 cut(s) 250, 728, 908, 1076
AfeI AGCGCT 1 cut(s) 1162
AfiI CCNNNNNNNGG 4 cut(s) 283, 670, 698, 1048
AflIII ACRYGT 1 cut(s) 495
AgsI TTSAA 6 cut(s) 187, 245, 328, 442, 779, 973
AluBI AGCT 7 cut(s) 190, 224, 260, 365, 824, 969, 1015
AluI AGCT 7 cut(s) 190, 224, 260, 365, 824, 969, 1015
Alw26I GTCTC 4 cut(s) 450, 621, 776, 1053
AlwI GGATC 4 cut(s) 163, 595, 809, 1144
AlwNI CAGNNNCTG 1 cut(s) 98
Aor51HI AGCGCT 1 cut(s) 1162
AoxI GGCC 1 cut(s) 812
ApeKI GCWGC 5 cut(s) 362, 821, 1023, 1158, 1169
ApoI RAATTY 1 cut(s) 51
Asp700I GAANNNNTTC 1 cut(s) 125
AspLEI GCGC 1 cut(s) 1163
AspS9I GGNCC 4 cut(s) 212, 689, 813, 1091
AsuC2I CCSGG 1 cut(s) 693
AsuHPI GGTGA 8 cut(s) 67, 144, 178, 206, 229, 362, 970, 1021
AvaII GGWCC 3 cut(s) 212, 689, 1091
BaeI ACNNNNGTAYC 2 cut(s) 619, 652
BanII GRGCYC 1 cut(s) 1148
BauI CACGAG 1 cut(s) 734
BbrPI CACGTG 1 cut(s) 670
BbsI GAAGAC 2 cut(s) 292, 555
BbvCI CCTCAGC 1 cut(s) 66
BbvI GCAGC 4 cut(s) 374, 833, 1035, 1170
BccI CCATC 5 cut(s) 308, 422, 560, 644, 1082
BcgI CGANNNNNNTGC 2 cut(s) 114, 148
BciVI GTATCC 1 cut(s) 1044
BcnI CCSGG 1 cut(s) 693
BcoDI GTCTC 4 cut(s) 450, 621, 776, 1053
BfmI CTRYAG 1 cut(s) 819
BfoI RGCGCY 1 cut(s) 1164
BfuI GTATCC 1 cut(s) 1044
BisI GCNGC 6 cut(s) 363, 751, 822, 1024, 1159, 1170
BlsI GCNGC 6 cut(s) 364, 752, 823, 1025, 1160, 1171
BmcAI AGTACT 1 cut(s) 908
Bme1390I CCNGG 1 cut(s) 693
Bme18I GGWCC 3 cut(s) 212, 689, 1091
BmgT120I GGNCC 4 cut(s) 212, 689, 813, 1091
BmiI GGNNCC 4 cut(s) 213, 340, 505, 920
BmrFI CCNGG 1 cut(s) 693
BmsI GCATC 3 cut(s) 463, 848, 950
BpiI GAAGAC 2 cut(s) 292, 555
BpmI CTGGAG 1 cut(s) 1149
Bpu10I CCTNAGC 1 cut(s) 66
BpuEI CTTGAG 1 cut(s) 854
BpuMI CCSGG 1 cut(s) 693
Bsa29I ATCGAT 1 cut(s) 471
BsaAI YACGTR 1 cut(s) 670
BsaJI CCNNGG 2 cut(s) 277, 914
BsaWI WCCGGW 1 cut(s) 623
Bsc4I CCNNNNNNNGG 4 cut(s) 283, 670, 698, 1048
Bse1I ACTGG 1 cut(s) 922
Bse3DI GCAATG 2 cut(s) 364, 1105
BseCI ATCGAT 1 cut(s) 471
BseDI CCNNGG 2 cut(s) 277, 914
BseGI GGATG 2 cut(s) 660, 839
BseLI CCNNNNNNNGG 4 cut(s) 283, 670, 698, 1048
BseMI GCAATG 2 cut(s) 364, 1105
BseMII CTCAG 4 cut(s) 57, 122, 438, 1154
BseNI ACTGG 1 cut(s) 922
BseRI GAGGAG 2 cut(s) 348, 351
BseXI GCAGC 4 cut(s) 374, 833, 1035, 1170
BsgI GTGCAG 1 cut(s) 754
Bsh1236I CGCG 1 cut(s) 1007
Bsh1285I CGRYCG 1 cut(s) 471
BshFI GGCC 1 cut(s) 814
BshVI ATCGAT 1 cut(s) 471
BsiEI CGRYCG 1 cut(s) 471
BsiSI CCGG 2 cut(s) 624, 692
BslFI GGGAC 3 cut(s) 540, 708, 1107
BslI CCNNNNNNNGG 4 cut(s) 283, 670, 698, 1048
BsmAI GTCTC 4 cut(s) 450, 621, 776, 1053
BsmBI CGTCTC 1 cut(s) 621
BsmFI GGGAC 3 cut(s) 540, 708, 1107
BsmI GAATGC 1 cut(s) 125
BsnI GGCC 1 cut(s) 814
Bsp1286I GDGCHC 1 cut(s) 1148
Bsp143I GATC 8 cut(s) 168, 198, 450, 468, 534, 600, 801, 1136
BspACI CCGC 4 cut(s) 687, 750, 837, 1007
BspANI GGCC 1 cut(s) 814
BspCNI CTCAG 4 cut(s) 58, 121, 439, 1153
BspDI ATCGAT 1 cut(s) 471
BspFNI CGCG 1 cut(s) 1007
BspLI GGNNCC 4 cut(s) 213, 340, 505, 920
BspMAI CTGCAG 1 cut(s) 823
BspPI GGATC 4 cut(s) 163, 595, 809, 1144
BsrDI GCAATG 2 cut(s) 364, 1105
BsrI ACTGG 1 cut(s) 922
BssECI CCNNGG 2 cut(s) 277, 914
BssMI GATC 8 cut(s) 168, 198, 450, 468, 534, 600, 801, 1136
BssSI CACGAG 1 cut(s) 734
BssT1I CCWWGG 2 cut(s) 277, 914
Bst2BI CACGAG 1 cut(s) 734
Bst4CI ACNGT 5 cut(s) 253, 266, 350, 383, 554
Bst6I CTCTTC 1 cut(s) 780
BstBAI YACGTR 1 cut(s) 670
BstC8I GCNNGC 3 cut(s) 139, 826, 1156
BstDEI CTNAG 4 cut(s) 66, 108, 447, 1140
BstEII GGTNACC 1 cut(s) 235
BstF5I GGATG 2 cut(s) 660, 839
BstFNI CGCG 1 cut(s) 1007
BstH2I RGCGCY 1 cut(s) 1164
BstHHI GCGC 1 cut(s) 1163
BstKTI GATC 8 cut(s) 171, 201, 453, 471, 537, 603, 804, 1139
BstMAI GTCTC 4 cut(s) 450, 621, 776, 1053
BstMBI GATC 8 cut(s) 168, 198, 450, 468, 534, 600, 801, 1136
BstMCI CGRYCG 1 cut(s) 471
BstMWI GCNNNNNNNGC 2 cut(s) 1160, 1169
BstNSI RCATGY 3 cut(s) 141, 687, 1158
BstPI GGTNACC 1 cut(s) 235
BstSCI CCNGG 1 cut(s) 691
BstSFI CTRYAG 1 cut(s) 819
BstUI CGCG 1 cut(s) 1007
BstV1I GCAGC 4 cut(s) 374, 833, 1035, 1170
BstV2I GAAGAC 2 cut(s) 292, 555
BstX2I RGATCY 2 cut(s) 600, 1136
BstXI CCANNNNNNTGG 1 cut(s) 1132
BstYI RGATCY 2 cut(s) 600, 1136
Bsu15I ATCGAT 1 cut(s) 471
BsuI GTATCC 1 cut(s) 1044
BsuRI GGCC 1 cut(s) 814
BsuTUI ATCGAT 1 cut(s) 471
BtsCI GGATG 2 cut(s) 660, 839
BtsIMutI CAGTG 3 cut(s) 561, 712, 929
Cac8I GCNNGC 3 cut(s) 139, 826, 1156
CaiI CAGNNNCTG 1 cut(s) 98
CfoI GCGC 1 cut(s) 1163
Cfr13I GGNCC 4 cut(s) 212, 689, 813, 1091
ClaI ATCGAT 1 cut(s) 471
CpoI CGGWCCG 1 cut(s) 689
CseI GACGC 1 cut(s) 1013
Csp6I GTAC 4 cut(s) 249, 727, 907, 1075
CspCI CAANNNNNGTGG 2 cut(s) 144, 179
CspI CGGWCCG 1 cut(s) 689
CviAII CATG 7 cut(s) 138, 216, 514, 520, 684, 810, 1155
CviQI GTAC 4 cut(s) 249, 727, 907, 1075
DdeI CTNAG 4 cut(s) 66, 108, 447, 1140
DpnI GATC 8 cut(s) 170, 200, 452, 470, 536, 602, 803, 1138
DpnII GATC 8 cut(s) 168, 198, 450, 468, 534, 600, 801, 1136
Eam1104I CTCTTC 1 cut(s) 780
EarI CTCTTC 1 cut(s) 780
Eco130I CCWWGG 2 cut(s) 277, 914
Eco24I GRGCYC 1 cut(s) 1148
Eco32I GATATC 1 cut(s) 1069
Eco47I GGWCC 3 cut(s) 212, 689, 1091
Eco47III AGCGCT 1 cut(s) 1162
Eco72I CACGTG 1 cut(s) 670
Eco91I GGTNACC 1 cut(s) 235
EcoO65I GGTNACC 1 cut(s) 235
EcoRV GATATC 1 cut(s) 1069
EcoT14I CCWWGG 2 cut(s) 277, 914
EcoT38I GRGCYC 1 cut(s) 1148
ErhI CCWWGG 2 cut(s) 277, 914
Esp3I CGTCTC 1 cut(s) 621
FaeI CATG 7 cut(s) 141, 219, 517, 523, 687, 813, 1158
FaqI GGGAC 3 cut(s) 540, 708, 1107
FatI CATG 7 cut(s) 137, 215, 513, 519, 683, 809, 1154
Fnu4HI GCNGC 6 cut(s) 363, 751, 822, 1024, 1159, 1170
FokI GGATG 2 cut(s) 667, 826
FriOI GRGCYC 1 cut(s) 1148
Fsp4HI GCNGC 6 cut(s) 363, 751, 822, 1024, 1159, 1170
GlaI GCGC 1 cut(s) 1162
GluI GCNGC 6 cut(s) 363, 751, 822, 1024, 1159, 1170
GsuI CTGGAG 1 cut(s) 1149
HaeII RGCGCY 1 cut(s) 1164
HaeIII GGCC 1 cut(s) 814
HapII CCGG 2 cut(s) 624, 692
HgaI GACGC 1 cut(s) 1013
HhaI GCGC 1 cut(s) 1163
Hin1II CATG 7 cut(s) 141, 219, 517, 523, 687, 813, 1158
Hin6I GCGC 1 cut(s) 1161
HinP1I GCGC 1 cut(s) 1161
HindIII AAGCTT 1 cut(s) 188
HinfI GANTC 5 cut(s) 372, 570, 594, 702, 715
HpaII CCGG 2 cut(s) 624, 692
HphI GGTGA 8 cut(s) 67, 144, 178, 206, 229, 362, 970, 1021
Hpy166II GTNNAC 1 cut(s) 961
Hpy188I TCNGA 8 cut(s) 100, 120, 448, 455, 647, 844, 983, 1143
Hpy188III TCNNGA 7 cut(s) 202, 532, 598, 712, 779, 805, 973
Hpy8I GTNNAC 1 cut(s) 961
Hpy99I CGWCG 3 cut(s) 350, 542, 647
HpyAV CCTTC 7 cut(s) 251, 277, 347, 352, 670, 674, 717
HpyCH4III ACNGT 5 cut(s) 253, 266, 350, 383, 554
HpyCH4IV ACGT 5 cut(s) 495, 669, 876, 1047, 1116
HpyCH4V TGCA 8 cut(s) 219, 362, 402, 771, 821, 927, 1023, 1158
HpyF10VI GCNNNNNNNGC 2 cut(s) 1160, 1169
HpyF3I CTNAG 4 cut(s) 66, 108, 447, 1140
HpySE526I ACGT 5 cut(s) 495, 669, 876, 1047, 1116
Hsp92II CATG 7 cut(s) 141, 219, 517, 523, 687, 813, 1158
HspAI GCGC 1 cut(s) 1161
Kzo9I GATC 8 cut(s) 168, 198, 450, 468, 534, 600, 801, 1136
LmnI GCTCC 6 cut(s) 229, 338, 503, 833, 1082, 1168
LpnPI CCDG 9 cut(s) 78, 95, 558, 637, 705, 935, 978, 1055, 1107
Lsp1109I GCAGC 4 cut(s) 374, 833, 1035, 1170
LweI GCATC 3 cut(s) 463, 848, 950
MaeII ACGT 5 cut(s) 495, 669, 876, 1047, 1116
MaeIII GTNAC 6 cut(s) 150, 235, 266, 383, 587, 679
MalI GATC 8 cut(s) 170, 200, 452, 470, 536, 602, 803, 1138
MboI GATC 8 cut(s) 168, 198, 450, 468, 534, 600, 801, 1136
MboII GAAGA 7 cut(s) 78, 138, 292, 560, 594, 670, 767
MflI RGATCY 2 cut(s) 600, 1136
MhlI GDGCHC 1 cut(s) 1148
MluCI AATT 3 cut(s) 27, 51, 948
MlyI GAGTC 3 cut(s) 381, 603, 724
MmeI TCCRAC 1 cut(s) 625
MroXI GAANNNNTTC 1 cut(s) 125
MseI TTAA 4 cut(s) 321, 606, 756, 951
MslI CAYNNNNRTG 3 cut(s) 136, 494, 518
MspA1I CMGCKG 1 cut(s) 750
MspI CCGG 2 cut(s) 624, 692
MspR9I CCNGG 1 cut(s) 693
Mva1269I GAATGC 1 cut(s) 125
MvnI CGCG 1 cut(s) 1007
MwoI GCNNNNNNNGC 2 cut(s) 1160, 1169
NciI CCSGG 1 cut(s) 693
NdeII GATC 8 cut(s) 168, 198, 450, 468, 534, 600, 801, 1136
NlaIII CATG 7 cut(s) 141, 219, 517, 523, 687, 813, 1158
NlaIV GGNNCC 4 cut(s) 213, 340, 505, 920
NmuCI GTSAC 5 cut(s) 150, 235, 383, 587, 679
NspI RCATGY 3 cut(s) 141, 687, 1158
PaeI GCATGC 2 cut(s) 141, 1158
PctI GAATGC 1 cut(s) 125
PdmI GAANNNNTTC 1 cut(s) 125
PfeI GAWTC 2 cut(s) 570, 702
PflFI GACNNNGTC 1 cut(s) 593
PflMI CCANNNNNTGG 1 cut(s) 1048
PfoI TCCNGGA 1 cut(s) 691
PkrI GCNGC 6 cut(s) 364, 752, 823, 1025, 1160, 1171
Ple19I CGATCG 1 cut(s) 471
PleI GAGTC 3 cut(s) 380, 602, 723
PmaCI CACGTG 1 cut(s) 670
PmlI CACGTG 1 cut(s) 670
PpsI GAGTC 3 cut(s) 380, 602, 723
Ppu21I YACGTR 1 cut(s) 670
PspCI CACGTG 1 cut(s) 670
PspEI GGTNACC 1 cut(s) 235
PspN4I GGNNCC 4 cut(s) 213, 340, 505, 920
PspPI GGNCC 4 cut(s) 212, 689, 813, 1091
PstI CTGCAG 1 cut(s) 823
PstNI CAGNNNCTG 1 cut(s) 98
PsuI RGATCY 2 cut(s) 600, 1136
PsyI GACNNNGTC 1 cut(s) 593
PvuI CGATCG 1 cut(s) 471
RsaI GTAC 4 cut(s) 250, 728, 908, 1076
RsaNI GTAC 4 cut(s) 249, 727, 907, 1075
RseI CAYNNNNRTG 3 cut(s) 136, 494, 518
Rsr2I CGGWCCG 1 cut(s) 689
RsrII CGGWCCG 1 cut(s) 689
SaqAI TTAA 4 cut(s) 321, 606, 756, 951
SatI GCNGC 6 cut(s) 363, 751, 822, 1024, 1159, 1170
Sau3AI GATC 8 cut(s) 168, 198, 450, 468, 534, 600, 801, 1136
Sau96I GGNCC 4 cut(s) 212, 689, 813, 1091
ScaI AGTACT 1 cut(s) 908
SchI GAGTC 3 cut(s) 381, 603, 724
ScrFI CCNGG 1 cut(s) 693
SduI GDGCHC 1 cut(s) 1148
SfaNI GCATC 3 cut(s) 463, 848, 950
SfcI CTRYAG 1 cut(s) 819
SinI GGWCC 3 cut(s) 212, 689, 1091
SmiMI CAYNNNNRTG 3 cut(s) 136, 494, 518
SmlI CTYRAG 1 cut(s) 869
SmoI CTYRAG 1 cut(s) 869
SphI GCATGC 2 cut(s) 141, 1158
Sse9I AATT 3 cut(s) 27, 51, 948
SsiI CCGC 4 cut(s) 687, 750, 837, 1007
StyD4I CCNGG 1 cut(s) 691
StyI CCWWGG 2 cut(s) 277, 914
TaaI ACNGT 5 cut(s) 253, 266, 350, 383, 554
TaiI ACGT 5 cut(s) 498, 672, 879, 1050, 1119
TaqI TCGA 7 cut(s) 201, 345, 396, 467, 471, 855, 897
TasI AATT 3 cut(s) 27, 51, 948
TatI WGTACW 2 cut(s) 906, 1074
TauI GCSGC 1 cut(s) 753
TfiI GAWTC 2 cut(s) 570, 702
Tru1I TTAA 4 cut(s) 321, 606, 756, 951
Tru9I TTAA 4 cut(s) 321, 606, 756, 951
TscAI CASTG 3 cut(s) 568, 712, 929
TseFI GTSAC 5 cut(s) 150, 235, 383, 587, 679
TseI GCWGC 5 cut(s) 362, 821, 1023, 1158, 1169
Tsp45I GTSAC 5 cut(s) 150, 235, 383, 587, 679
TspDTI ATGAA 6 cut(s) 78, 424, 536, 604, 671, 839
TspGWI ACGGA 6 cut(s) 345, 606, 631, 714, 744, 1026
TspRI CASTG 3 cut(s) 568, 712, 929
Tth111I GACNNNGTC 1 cut(s) 593
Van91I CCANNNNNTGG 1 cut(s) 1048
VpaK11BI GGWCC 3 cut(s) 212, 689, 1091
XapI RAATTY 1 cut(s) 51
XceI RCATGY 3 cut(s) 141, 687, 1158
XmnI GAANNNNTTC 1 cut(s) 125
ZrmI AGTACT 1 cut(s) 908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.