Exopolygalacturonase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Glyco_hydro_28 | PF00295 | 50 - 378 | 3.3e-104 | Glycosyl hydrolases family 28 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 285, 1123 |
| Acc65I | GGTACC | 1 cut(s) | 668 |
| AccB1I | GGYRCC | 2 cut(s) | 268, 668 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 713 |
| AciI | CCGC | 1 cut(s) | 852 |
| AclWI | GGATC | 1 cut(s) | 317 |
| AcsI | RAATTY | 1 cut(s) | 585 |
| AcyI | GRCGYC | 1 cut(s) | 269 |
| AfaI | GTAC | 5 cut(s) | 349, 670, 743, 787, 1068 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 230, 278, 713 |
| AgeI | ACCGGT | 1 cut(s) | 638 |
| AgsI | TTSAA | 3 cut(s) | 217, 445, 988 |
| AjnI | CCWGG | 2 cut(s) | 559, 706 |
| AluBI | AGCT | 3 cut(s) | 380, 845, 984 |
| AluI | AGCT | 3 cut(s) | 380, 845, 984 |
| Alw21I | GWGCWC | 1 cut(s) | 876 |
| AlwI | GGATC | 1 cut(s) | 317 |
| AoxI | GGCC | 2 cut(s) | 827, 1020 |
| ApeKI | GCWGC | 1 cut(s) | 1132 |
| ApoI | RAATTY | 1 cut(s) | 585 |
| AseI | ATTAAT | 1 cut(s) | 432 |
| AsiGI | ACCGGT | 1 cut(s) | 638 |
| Asp718I | GGTACC | 1 cut(s) | 668 |
| AspLEI | GCGC | 3 cut(s) | 271, 286, 1124 |
| AspS9I | GGNCC | 3 cut(s) | 221, 233, 704 |
| AsuC2I | CCSGG | 1 cut(s) | 607 |
| AsuHPI | GGTGA | 3 cut(s) | 538, 653, 674 |
| AsuII | TTCGAA | 1 cut(s) | 83 |
| AvaII | GGWCC | 3 cut(s) | 221, 233, 704 |
| BanI | GGYRCC | 2 cut(s) | 268, 668 |
| BbsI | GAAGAC | 1 cut(s) | 759 |
| Bbv12I | GWGCWC | 1 cut(s) | 876 |
| BbvI | GCAGC | 1 cut(s) | 1144 |
| BccI | CCATC | 6 cut(s) | 248, 272, 356, 575, 659, 964 |
| BceAI | ACGGC | 1 cut(s) | 1007 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 141, 175 |
| BciT130I | CCWGG | 2 cut(s) | 561, 708 |
| BcnI | CCSGG | 1 cut(s) | 607 |
| BfaI | CTAG | 1 cut(s) | 14 |
| BfmI | CTRYAG | 2 cut(s) | 840, 1014 |
| BfoI | RGCGCY | 1 cut(s) | 272 |
| BglII | AGATCT | 1 cut(s) | 1081 |
| BisI | GCNGC | 1 cut(s) | 1133 |
| BlsI | GCNGC | 1 cut(s) | 1134 |
| Bme1390I | CCNGG | 3 cut(s) | 561, 607, 708 |
| Bme18I | GGWCC | 3 cut(s) | 221, 233, 704 |
| BmgT120I | GGNCC | 3 cut(s) | 221, 233, 704 |
| BmiI | GGNNCC | 4 cut(s) | 270, 355, 637, 670 |
| BmrFI | CCNGG | 3 cut(s) | 561, 607, 708 |
| BmrI | ACTGGG | 1 cut(s) | 159 |
| BmsI | GCATC | 4 cut(s) | 133, 161, 218, 732 |
| BmuI | ACTGGG | 1 cut(s) | 159 |
| BpiI | GAAGAC | 1 cut(s) | 759 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 322, 354 |
| BpmI | CTGGAG | 1 cut(s) | 582 |
| Bpu14I | TTCGAA | 1 cut(s) | 83 |
| BpuEI | CTTGAG | 3 cut(s) | 347, 1070, 1131 |
| BpuMI | CCSGG | 1 cut(s) | 607 |
| BsaHI | GRCGYC | 1 cut(s) | 269 |
| BsaWI | WCCGGW | 1 cut(s) | 638 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 937, 967 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 230, 278, 713 |
| Bse118I | RCCGGY | 1 cut(s) | 638 |
| Bse1I | ACTGG | 4 cut(s) | 165, 355, 769, 1099 |
| Bse3DI | GCAATG | 2 cut(s) | 260, 982 |
| BseBI | CCWGG | 2 cut(s) | 561, 708 |
| BseGI | GGATG | 2 cut(s) | 478, 524 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 230, 278, 713 |
| BseMI | GCAATG | 2 cut(s) | 260, 982 |
| BseMII | CTCAG | 2 cut(s) | 870, 1061 |
| BseNI | ACTGG | 4 cut(s) | 165, 355, 769, 1099 |
| BseXI | GCAGC | 1 cut(s) | 1144 |
| BsgI | GTGCAG | 1 cut(s) | 1151 |
| BshFI | GGCC | 2 cut(s) | 829, 1022 |
| BshNI | GGYRCC | 2 cut(s) | 268, 668 |
| BshTI | ACCGGT | 1 cut(s) | 638 |
| BsiHKAI | GWGCWC | 1 cut(s) | 876 |
| BsiSI | CCGG | 2 cut(s) | 606, 639 |
| BslFI | GGGAC | 2 cut(s) | 202, 1015 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 230, 278, 713 |
| BsmFI | GGGAC | 2 cut(s) | 202, 1015 |
| BsnI | GGCC | 2 cut(s) | 829, 1022 |
| Bsp119I | TTCGAA | 1 cut(s) | 83 |
| Bsp1286I | GDGCHC | 1 cut(s) | 876 |
| Bsp143I | GATC | 3 cut(s) | 309, 969, 1081 |
| BspACI | CCGC | 1 cut(s) | 852 |
| BspANI | GGCC | 2 cut(s) | 829, 1022 |
| BspCNI | CTCAG | 2 cut(s) | 869, 1062 |
| BspHI | TCATGA | 1 cut(s) | 18 |
| BspLI | GGNNCC | 4 cut(s) | 270, 355, 637, 670 |
| BspMAI | CTGCAG | 1 cut(s) | 1018 |
| BspPI | GGATC | 1 cut(s) | 317 |
| BspT104I | TTCGAA | 1 cut(s) | 83 |
| BspT107I | GGYRCC | 2 cut(s) | 268, 668 |
| BsrDI | GCAATG | 2 cut(s) | 260, 982 |
| BsrFI | RCCGGY | 1 cut(s) | 638 |
| BsrI | ACTGG | 4 cut(s) | 165, 355, 769, 1099 |
| BssAI | RCCGGY | 1 cut(s) | 638 |
| BssMI | GATC | 3 cut(s) | 309, 969, 1081 |
| BssNI | GRCGYC | 1 cut(s) | 269 |
| Bst2UI | CCWGG | 2 cut(s) | 561, 708 |
| Bst4CI | ACNGT | 2 cut(s) | 550, 785 |
| BstACI | GRCGYC | 1 cut(s) | 269 |
| BstBI | TTCGAA | 1 cut(s) | 83 |
| BstC8I | GCNNGC | 2 cut(s) | 267, 1049 |
| BstDEI | CTNAG | 2 cut(s) | 856, 1070 |
| BstEII | GGTNACC | 1 cut(s) | 896 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 228 |
| BstF5I | GGATG | 2 cut(s) | 478, 524 |
| BstH2I | RGCGCY | 1 cut(s) | 272 |
| BstHHI | GCGC | 3 cut(s) | 271, 286, 1124 |
| BstKTI | GATC | 3 cut(s) | 312, 972, 1084 |
| BstMBI | GATC | 3 cut(s) | 309, 969, 1081 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 851, 981 |
| BstNI | CCWGG | 2 cut(s) | 561, 708 |
| BstPI | GGTNACC | 1 cut(s) | 896 |
| BstSCI | CCNGG | 3 cut(s) | 559, 605, 706 |
| BstSFI | CTRYAG | 2 cut(s) | 840, 1014 |
| BstV1I | GCAGC | 1 cut(s) | 1144 |
| BstV2I | GAAGAC | 1 cut(s) | 759 |
| BstX2I | RGATCY | 1 cut(s) | 1081 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 764 |
| BstYI | RGATCY | 1 cut(s) | 1081 |
| BsuRI | GGCC | 2 cut(s) | 829, 1022 |
| BtsCI | GGATG | 2 cut(s) | 478, 524 |
| BtsI | GCAGTG | 1 cut(s) | 944 |
| BtsIMutI | CAGTG | 1 cut(s) | 944 |
| Cac8I | GCNNGC | 2 cut(s) | 267, 1049 |
| CciI | TCATGA | 1 cut(s) | 18 |
| CfoI | GCGC | 3 cut(s) | 271, 286, 1124 |
| Cfr10I | RCCGGY | 1 cut(s) | 638 |
| Cfr13I | GGNCC | 3 cut(s) | 221, 233, 704 |
| CseI | GACGC | 1 cut(s) | 606 |
| CsiI | ACCWGGT | 1 cut(s) | 706 |
| Csp6I | GTAC | 5 cut(s) | 348, 669, 742, 786, 1067 |
| CspAI | ACCGGT | 1 cut(s) | 638 |
| CviAII | CATG | 3 cut(s) | 19, 713, 825 |
| CviQI | GTAC | 5 cut(s) | 348, 669, 742, 786, 1067 |
| DdeI | CTNAG | 2 cut(s) | 856, 1070 |
| DinI | GGCGCC | 1 cut(s) | 270 |
| DpnI | GATC | 3 cut(s) | 311, 971, 1083 |
| DpnII | GATC | 3 cut(s) | 309, 969, 1081 |
| Eco47I | GGWCC | 3 cut(s) | 221, 233, 704 |
| Eco91I | GGTNACC | 1 cut(s) | 896 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 228 |
| EcoO109I | RGGNCCY | 1 cut(s) | 221 |
| EcoO65I | GGTNACC | 1 cut(s) | 896 |
| EcoRI | GAATTC | 1 cut(s) | 585 |
| EcoRII | CCWGG | 2 cut(s) | 559, 706 |
| EgeI | GGCGCC | 1 cut(s) | 270 |
| EheI | GGCGCC | 1 cut(s) | 270 |
| FaeI | CATG | 3 cut(s) | 22, 716, 828 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1092, 1124 |
| FaqI | GGGAC | 2 cut(s) | 202, 1015 |
| FatI | CATG | 3 cut(s) | 18, 712, 824 |
| FauNDI | CATATG | 2 cut(s) | 58, 931 |
| Fnu4HI | GCNGC | 1 cut(s) | 1133 |
| FokI | GGATG | 2 cut(s) | 485, 531 |
| Fsp4HI | GCNGC | 1 cut(s) | 1133 |
| FspBI | CTAG | 1 cut(s) | 14 |
| FspI | TGCGCA | 2 cut(s) | 285, 1123 |
| GlaI | GCGC | 3 cut(s) | 270, 285, 1123 |
| GluI | GCNGC | 1 cut(s) | 1133 |
| GsuI | CTGGAG | 1 cut(s) | 582 |
| HaeII | RGCGCY | 1 cut(s) | 272 |
| HaeIII | GGCC | 2 cut(s) | 829, 1022 |
| HapII | CCGG | 2 cut(s) | 606, 639 |
| HgaI | GACGC | 1 cut(s) | 606 |
| HhaI | GCGC | 3 cut(s) | 271, 286, 1124 |
| Hin1I | GRCGYC | 1 cut(s) | 269 |
| Hin1II | CATG | 3 cut(s) | 22, 716, 828 |
| Hin6I | GCGC | 3 cut(s) | 269, 284, 1122 |
| HinP1I | GCGC | 3 cut(s) | 269, 284, 1122 |
| HincII | GTYRAC | 1 cut(s) | 1092 |
| HindII | GTYRAC | 1 cut(s) | 1092 |
| HindIII | AAGCTT | 1 cut(s) | 378 |
| HinfI | GANTC | 4 cut(s) | 171, 768, 816, 952 |
| HpaI | GTTAAC | 1 cut(s) | 1092 |
| HpaII | CCGG | 2 cut(s) | 606, 639 |
| HphI | GGTGA | 3 cut(s) | 538, 653, 674 |
| Hpy166II | GTNNAC | 2 cut(s) | 704, 1092 |
| Hpy188I | TCNGA | 6 cut(s) | 109, 237, 411, 596, 728, 859 |
| Hpy188III | TCNNGA | 4 cut(s) | 19, 820, 967, 988 |
| Hpy8I | GTNNAC | 2 cut(s) | 704, 1092 |
| Hpy99I | CGWCG | 1 cut(s) | 163 |
| HpyAV | CCTTC | 1 cut(s) | 732 |
| HpyCH4III | ACNGT | 2 cut(s) | 550, 785 |
| HpyCH4IV | ACGT | 4 cut(s) | 158, 504, 759, 1128 |
| HpyCH4V | TGCA | 8 cut(s) | 62, 152, 228, 265, 399, 651, 1016, 1132 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 851, 981 |
| HpyF3I | CTNAG | 2 cut(s) | 856, 1070 |
| HpySE526I | ACGT | 4 cut(s) | 158, 504, 759, 1128 |
| Hsp92I | GRCGYC | 1 cut(s) | 269 |
| Hsp92II | CATG | 3 cut(s) | 22, 716, 828 |
| HspAI | GCGC | 3 cut(s) | 269, 284, 1122 |
| KasI | GGCGCC | 1 cut(s) | 268 |
| KpnI | GGTACC | 1 cut(s) | 672 |
| KspAI | GTTAAC | 1 cut(s) | 1092 |
| Kzo9I | GATC | 3 cut(s) | 309, 969, 1081 |
| LmnI | GCTCC | 1 cut(s) | 206 |
| Lsp1109I | GCAGC | 1 cut(s) | 1144 |
| LweI | GCATC | 4 cut(s) | 133, 161, 218, 732 |
| MabI | ACCWGGT | 1 cut(s) | 706 |
| MaeI | CTAG | 1 cut(s) | 14 |
| MaeII | ACGT | 4 cut(s) | 158, 504, 759, 1128 |
| MaeIII | GTNAC | 9 cut(s) | 5, 73, 475, 641, 694, 760, 896, 1055, 1073 |
| MalI | GATC | 3 cut(s) | 311, 971, 1083 |
| MboI | GATC | 3 cut(s) | 309, 969, 1081 |
| MboII | GAAGA | 2 cut(s) | 764, 1039 |
| MfeI | CAATTG | 1 cut(s) | 657 |
| MflI | RGATCY | 1 cut(s) | 1081 |
| MhlI | GDGCHC | 1 cut(s) | 876 |
| MluCI | AATT | 5 cut(s) | 103, 433, 585, 657, 832 |
| Mly113I | GGCGCC | 1 cut(s) | 269 |
| MlyI | GAGTC | 1 cut(s) | 946 |
| MmeI | TCCRAC | 2 cut(s) | 220, 562 |
| MnlI | CCTC | 6 cut(s) | 324, 432, 865, 917, 992, 1012 |
| MseI | TTAA | 8 cut(s) | 432, 468, 486, 507, 573, 612, 777, 1091 |
| MslI | CAYNNNNRTG | 4 cut(s) | 341, 507, 881, 1117 |
| MspI | CCGG | 2 cut(s) | 606, 639 |
| MspR9I | CCNGG | 3 cut(s) | 561, 607, 708 |
| MunI | CAATTG | 1 cut(s) | 657 |
| MvaI | CCWGG | 2 cut(s) | 561, 708 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 851, 981 |
| NarI | GGCGCC | 1 cut(s) | 269 |
| NciI | CCSGG | 1 cut(s) | 607 |
| NdeI | CATATG | 2 cut(s) | 58, 931 |
| NdeII | GATC | 3 cut(s) | 309, 969, 1081 |
| NlaIII | CATG | 3 cut(s) | 22, 716, 828 |
| NlaIV | GGNNCC | 4 cut(s) | 270, 355, 637, 670 |
| NmuCI | GTSAC | 5 cut(s) | 5, 73, 641, 1055, 1073 |
| NsbI | TGCGCA | 2 cut(s) | 285, 1123 |
| NspV | TTCGAA | 1 cut(s) | 83 |
| PagI | TCATGA | 1 cut(s) | 18 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 756 |
| PfeI | GAWTC | 3 cut(s) | 171, 768, 816 |
| PflFI | GACNNNGTC | 1 cut(s) | 708 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 713 |
| PinAI | ACCGGT | 1 cut(s) | 638 |
| PkrI | GCNGC | 1 cut(s) | 1134 |
| PleI | GAGTC | 1 cut(s) | 946 |
| PluTI | GGCGCC | 1 cut(s) | 272 |
| PpsI | GAGTC | 1 cut(s) | 946 |
| PpuMI | RGGWCCY | 1 cut(s) | 221 |
| PshBI | ATTAAT | 1 cut(s) | 432 |
| Psp5II | RGGWCCY | 1 cut(s) | 221 |
| Psp6I | CCWGG | 2 cut(s) | 559, 706 |
| PspEI | GGTNACC | 1 cut(s) | 896 |
| PspGI | CCWGG | 2 cut(s) | 559, 706 |
| PspN4I | GGNNCC | 4 cut(s) | 270, 355, 637, 670 |
| PspPI | GGNCC | 3 cut(s) | 221, 233, 704 |
| PspPPI | RGGWCCY | 1 cut(s) | 221 |
| PstI | CTGCAG | 1 cut(s) | 1018 |
| PsuI | RGATCY | 1 cut(s) | 1081 |
| PsyI | GACNNNGTC | 1 cut(s) | 708 |
| RsaI | GTAC | 5 cut(s) | 349, 670, 743, 787, 1068 |
| RsaNI | GTAC | 5 cut(s) | 348, 669, 742, 786, 1067 |
| RseI | CAYNNNNRTG | 4 cut(s) | 341, 507, 881, 1117 |
| SaqAI | TTAA | 8 cut(s) | 432, 468, 486, 507, 573, 612, 777, 1091 |
| SatI | GCNGC | 1 cut(s) | 1133 |
| Sau3AI | GATC | 3 cut(s) | 309, 969, 1081 |
| Sau96I | GGNCC | 3 cut(s) | 221, 233, 704 |
| SchI | GAGTC | 1 cut(s) | 946 |
| ScrFI | CCNGG | 3 cut(s) | 561, 607, 708 |
| SduI | GDGCHC | 1 cut(s) | 876 |
| SexAI | ACCWGGT | 1 cut(s) | 706 |
| SfaNI | GCATC | 4 cut(s) | 133, 161, 218, 732 |
| SfcI | CTRYAG | 2 cut(s) | 840, 1014 |
| SfoI | GGCGCC | 1 cut(s) | 270 |
| SfuI | TTCGAA | 1 cut(s) | 83 |
| SinI | GGWCC | 3 cut(s) | 221, 233, 704 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 341, 507, 881, 1117 |
| SmlI | CTYRAG | 3 cut(s) | 326, 1085, 1146 |
| SmoI | CTYRAG | 3 cut(s) | 326, 1085, 1146 |
| Sse9I | AATT | 5 cut(s) | 103, 433, 585, 657, 832 |
| SsiI | CCGC | 1 cut(s) | 852 |
| SspDI | GGCGCC | 1 cut(s) | 268 |
| SspI | AATATT | 2 cut(s) | 36, 994 |
| SspMI | CTAG | 1 cut(s) | 14 |
| StyD4I | CCNGG | 3 cut(s) | 559, 605, 706 |
| TaaI | ACNGT | 2 cut(s) | 550, 785 |
| TaiI | ACGT | 4 cut(s) | 161, 507, 762, 1131 |
| TaqI | TCGA | 3 cut(s) | 69, 83, 312 |
| TasI | AATT | 5 cut(s) | 103, 433, 585, 657, 832 |
| TfiI | GAWTC | 3 cut(s) | 171, 768, 816 |
| Tru1I | TTAA | 8 cut(s) | 432, 468, 486, 507, 573, 612, 777, 1091 |
| Tru9I | TTAA | 8 cut(s) | 432, 468, 486, 507, 573, 612, 777, 1091 |
| TscAI | CASTG | 1 cut(s) | 944 |
| TseFI | GTSAC | 5 cut(s) | 5, 73, 641, 1055, 1073 |
| TseI | GCWGC | 1 cut(s) | 1132 |
| Tsp45I | GTSAC | 5 cut(s) | 5, 73, 641, 1055, 1073 |
| TspDTI | ATGAA | 5 cut(s) | 408, 450, 578, 818, 899 |
| TspRI | CASTG | 1 cut(s) | 944 |
| Tth111I | GACNNNGTC | 1 cut(s) | 708 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 713 |
| VpaK11BI | GGWCC | 3 cut(s) | 221, 233, 704 |
| VspI | ATTAAT | 1 cut(s) | 432 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 228 |
| XapI | RAATTY | 1 cut(s) | 585 |
| XspI | CTAG | 1 cut(s) | 14 |