Prupe.3G203600_v2.0.a1

Exopolygalacturonase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000434
Physical Location & Seq
Forward (+)
21160003 .. 21161881
1879 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G203600.1

Sequence Viewer

Length: 1212 bp
ATGGGTTTGAAACTGAAAAATGTCTTGCCAATGTTTGTGTTCTTGTTGTTAGCATCCACAGCTAAAGCTCAATCTGCTGCCTTAGATGTGACAAGTGCAAAATATGGTGGAAAGCCAGGCTCTGATATTACCCAGGCTTTAGAGAAGGCTTGGACAGACGCATGTGCATCAACAACACCAAGTAAAATTGTTGTTCCAAAGGGAATATTCAAGTTTGTAGGAACAACTTTTAAAGGTCCTTGCAAGGCTGCTATTGAGTTTCAGCTCCAAGGAACATTGCAGGCTCCAGTAGATGGCAGCCAGCTCCCGAAGGACGACACTTGGATTGGTTTTGACCACGTCGACGGGCTCACCTTGTCAGGTGGTGGAACTTTTGATGGCCAAGGAGCACAGTCTTGGAAAAACAATGATTGCAACAAAAATAGACAATGCAAATCTAAACACATTAATTTGAGGTTCCACGTACTCACCAATTCCAAAATTTTGGACGTAACTTCAAAAGATAGCAAAAATTTCCACGTCAATCTTCAGAAGTGCGAGAAGGTTGAAATCAATGGATTTACCGTCTCAGCACCTAAGGAAAGCATGAACACAGATGGAATTCACATCGGTCGTTCAACTGGGATCAACATCACTGCCACAACCATCGTAACTGGGGATGATTGTATTTCGATCGGTGACGGTACCAAGGACCTCACCGTGACCAACGTTACTTGCGGGCCTGGCCACGGCATAGCCATCGGGAGCCTTGGAAGGTACCCAGAGGAAGAACCCGTGTCCGGCATCAATATTAAGAAATGCACCTTGACTGATACAACGAATGGTGTGAGGATCAAAACATGGCCTGCTTCCCCAATAGATAGCACTGCCTCGGATATTCACTTTGAGGATATTACCATGGTTAATGTTGGTAACCCTATCCTCATTGACCAAGAGTACTGCCCATGGAACGAATGCAAAAAAGGGGTTCCTTCCAAAGTTAAGATCAGCAATGTTAGCTTCAAGAACATCAAGGGCACATGTACCGACCCAGTTGCTGTGAAGCTTGCATGCAGCCCAGGCCTGCCATGTGAGAATGTGGAATTGAGTGACATTGATCTCAAGTATACTGGAGACAAAGGTCCTATTACCTCTGTGTGTTCTAATGTCAAGCCTACAATTACTCGCGTGGCACAGCCTCTTGCTTGTGCTACCGGCGCTGCTGCTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

404

Amino Acids

42.73

Weight (kDa)

8.09

Isoelectric Point (pI)

30.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000434)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07820 AT3G07830 AT3G07840 AT5G48140
fragaria_vesca FvH4_1g26811 FvH4_2g02350 FvH4_6g41380 FvH4_6g41380 FvH4_6g41380 FvH4_6g41430 FvH4_6g41740 FvH4_6g43060 FvH4_7g02910
malus_domestica MD00G1117700.v1.1 MD00G1117800.v1.1 MD00G1117900.v1.1 MD09G1120000.v1.1 MD09G1120100.v1.1 MD09G1120200.v1.1 MD09G1120300.v1.1 MD12G1142000.v1.1 MD13G1218300.v1.1 MD13G1220100.v1.1 MD13G1220200.v1.1 MD16G1223300.v1.1 MD16G1223500.v1.1 MD16G1223600.v1.1 MD17G1110800.v1.1
prunus_persica Prupe.1G044900_v2.0.a1 Prupe.1G045000_v2.0.a1 Prupe.1G167700_v2.0.a1 Prupe.2G005600_v2.0.a1 Prupe.2G005700_v2.0.a1 Prupe.2G008600_v2.0.a1 Prupe.2G009200_v2.0.a1 Prupe.2G009300_v2.0.a1 Prupe.2G009400_v2.0.a1 Prupe.3G109100_v2.0.a1 Prupe.3G109200_v2.0.a1 Prupe.3G109400_v2.0.a1 Prupe.3G109500_v2.0.a1 Prupe.3G109700_v2.0.a1 Prupe.3G203300_v2.0.a1 Prupe.3G203600_v2.0.a1 Prupe.3G203900_v2.0.a1 Prupe.3G204000_v2.0.a1 Prupe.3G204100_v2.0.a1 Prupe.3G204200_v2.0.a1
pyrus_communis pycom09g04480 pycom09g04490 pycom09g04500 pycom12g13680
rosa_chinensis RchiOBHm_Chr1g0323871 RchiOBHm_Chr2g0156921 RchiOBHm_Chr2g0159061 RchiOBHm_Chr6g0246271 RchiOBHm_Chr6g0246281
rosa_laevigata RLG00000015266 RLG00000020954 RLG00000021134 RLG00000030246 RLG00000030250 RLG00000030295
rosa_multiflora Rmu_co8098394.1_g000001 Rmu_co8404671.1_g000001 Rmu_sc0000507.1_g000021 Rmu_sc0001066.1_g000011 Rmu_sc0001066.1_g000015 Rmu_sc0009451.1_g000001 Rmu_ssc0000408.1_g000005
rosa_roxburghii Rroxscaffold_2G00090810 Rroxscaffold_2G00092580 Rroxscaffold_4G00326280 Rroxscaffold_7G00214720
rosa_rugosa Rorug01G0040400 Rorug02G0457200 Rorug05G0520000
rosa_samantha Rh1AG057700 Rh1BG048800 Rh1CG059100 Rh1DG063000 Rh2AG522900 Rh2BG536200 Rh2BG553200 Rh2CG507800 Rh2DG545200 Rh6AG034100 Rh6BG029300 Rh6DG028700
rosa_wichuraiana Rw0G023110 Rw1G004930 Rw2G043170 Rw2G044730 Rw6G002760 Rw6G002920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 683, 756
AccB1I GGYRCC 2 cut(s) 683, 756
AccB7I CCANNNNNTGG 1 cut(s) 293
AccI GTMKAC 2 cut(s) 342, 1106
AccII CGCG 1 cut(s) 1167
AciI CCGC 1 cut(s) 717
AclI AACGTT 1 cut(s) 708
AclWI GGATC 2 cut(s) 632, 839
AcoI YGGCCR 2 cut(s) 379, 724
AcsI RAATTY 3 cut(s) 480, 511, 600
AcuI CTGAAG 1 cut(s) 512
AfaI GTAC 5 cut(s) 465, 685, 758, 938, 1024
AfiI CCNNNNNNNGG 3 cut(s) 293, 728, 779
AflIII ACRYGT 1 cut(s) 1019
AgsI TTSAA 6 cut(s) 10, 211, 498, 548, 618, 1003
AjiI CACGTC 2 cut(s) 340, 520
AjnI CCWGG 4 cut(s) 115, 132, 721, 1057
AluBI AGCT 6 cut(s) 62, 68, 265, 304, 999, 1045
AluI AGCT 6 cut(s) 62, 68, 265, 304, 999, 1045
Alw21I GWGCWC 1 cut(s) 391
Alw26I GTCTC 2 cut(s) 571, 1107
AlwI GGATC 2 cut(s) 632, 839
AlwNI CAGNNNCTG 2 cut(s) 122, 1037
AoxI GGCC 5 cut(s) 379, 719, 724, 842, 1060
ApeKI GCWGC 7 cut(s) 77, 248, 297, 1053, 1199, 1202, 1205
ApoI RAATTY 3 cut(s) 480, 511, 600
AseI ATTAAT 1 cut(s) 447
Asp718I GGTACC 2 cut(s) 683, 756
AspLEI GCGC 1 cut(s) 1199
AspS9I GGNCC 4 cut(s) 236, 691, 719, 1121
AsuHPI GGTGA 4 cut(s) 343, 460, 688, 689
AvaII GGWCC 3 cut(s) 236, 691, 1121
AxyI CCTNAGG 1 cut(s) 576
BaeGI GKGCMC 1 cut(s) 1019
BalI TGGCCA 2 cut(s) 381, 726
BanI GGYRCC 2 cut(s) 683, 756
BanII GRGCYC 1 cut(s) 351
Bbv12I GWGCWC 1 cut(s) 391
BbvI GCAGC 7 cut(s) 64, 235, 309, 1065, 1186, 1189, 1192
BccI CCATC 5 cut(s) 287, 371, 590, 653, 746
BceAI ACGGC 1 cut(s) 745
BcgI CGANNNNNNTGC 4 cut(s) 721, 755, 1016, 1050
BciT130I CCWGG 4 cut(s) 117, 134, 723, 1059
BcoDI GTCTC 2 cut(s) 571, 1107
BfoI RGCGCY 1 cut(s) 1200
BisI GCNGC 7 cut(s) 78, 249, 298, 1054, 1200, 1203, 1206
BlsI GCNGC 7 cut(s) 79, 250, 299, 1055, 1201, 1204, 1207
BmcAI AGTACT 1 cut(s) 938
Bme1390I CCNGG 4 cut(s) 117, 134, 723, 1059
Bme18I GGWCC 3 cut(s) 236, 691, 1121
BmgBI CACGTC 2 cut(s) 340, 520
BmgT120I GGNCC 4 cut(s) 236, 691, 719, 1121
BmiI GGNNCC 6 cut(s) 285, 458, 685, 746, 758, 969
BmrFI CCNGG 4 cut(s) 117, 134, 723, 1059
BmrI ACTGGG 3 cut(s) 630, 663, 1025
BmsI GCATC 3 cut(s) 62, 176, 792
BmuI ACTGGG 3 cut(s) 630, 663, 1025
BoxI GACNNNNGTC 1 cut(s) 1119
BpmI CTGGAG 2 cut(s) 270, 1131
BpuEI CTTGAG 1 cut(s) 1085
BsaAI YACGTR 1 cut(s) 463
BsaBI GATNNNNATC 1 cut(s) 629
Bsc4I CCNNNNNNNGG 3 cut(s) 293, 728, 779
Bse118I RCCGGY 1 cut(s) 1193
Bse1I ACTGG 5 cut(s) 287, 625, 658, 1031, 1114
Bse21I CCTNAGG 1 cut(s) 576
Bse3DI GCAATG 2 cut(s) 275, 997
Bse8I GATNNNNATC 1 cut(s) 629
BseBI CCWGG 4 cut(s) 117, 134, 723, 1059
BseGI GGATG 2 cut(s) 53, 664
BseJI GATNNNNATC 1 cut(s) 629
BseLI CCNNNNNNNGG 3 cut(s) 293, 728, 779
BseMI GCAATG 2 cut(s) 275, 997
BseMII CTCAG 1 cut(s) 582
BseNI ACTGG 5 cut(s) 287, 625, 658, 1031, 1114
BseSI GKGCMC 1 cut(s) 1019
BseXI GCAGC 7 cut(s) 64, 235, 309, 1065, 1186, 1189, 1192
Bsh1236I CGCG 1 cut(s) 1167
Bsh1285I CGRYCG 2 cut(s) 613, 675
BshFI GGCC 5 cut(s) 381, 721, 726, 844, 1062
BshNI GGYRCC 2 cut(s) 683, 756
BsiEI CGRYCG 2 cut(s) 613, 675
BsiHKAI GWGCWC 1 cut(s) 391
BsiSI CCGG 2 cut(s) 780, 1194
BslI CCNNNNNNNGG 3 cut(s) 293, 728, 779
BsmAI GTCTC 2 cut(s) 571, 1107
BsmBI CGTCTC 1 cut(s) 571
BsmI GAATGC 1 cut(s) 959
BsnI GGCC 5 cut(s) 381, 721, 726, 844, 1062
Bsp1286I GDGCHC 3 cut(s) 351, 391, 1019
Bsp143I GATC 5 cut(s) 624, 672, 831, 984, 1096
Bsp19I CCATGG 2 cut(s) 897, 944
BspACI CCGC 1 cut(s) 717
BspANI GGCC 5 cut(s) 381, 721, 726, 844, 1062
BspCNI CTCAG 1 cut(s) 581
BspFNI CGCG 1 cut(s) 1167
BspLI GGNNCC 6 cut(s) 285, 458, 685, 746, 758, 969
BspPI GGATC 2 cut(s) 632, 839
BspT107I GGYRCC 2 cut(s) 683, 756
BsrDI GCAATG 2 cut(s) 275, 997
BsrFI RCCGGY 1 cut(s) 1193
BsrI ACTGG 5 cut(s) 287, 625, 658, 1031, 1114
BssAI RCCGGY 1 cut(s) 1193
BssMI GATC 5 cut(s) 624, 672, 831, 984, 1096
BssNAI GTATAC 1 cut(s) 1107
BssT1I CCWWGG 6 cut(s) 268, 382, 687, 748, 897, 944
Bst1107I GTATAC 1 cut(s) 1107
Bst2UI CCWGG 4 cut(s) 117, 134, 723, 1059
Bst4CI ACNGT 4 cut(s) 393, 565, 683, 700
BstBAI YACGTR 1 cut(s) 463
BstC8I GCNNGC 7 cut(s) 282, 302, 719, 846, 1047, 1051, 1064
BstDEI CTNAG 3 cut(s) 82, 568, 576
BstDSI CCRYGG 3 cut(s) 727, 897, 944
BstEII GGTNACC 1 cut(s) 911
BstF5I GGATG 2 cut(s) 53, 664
BstFNI CGCG 1 cut(s) 1167
BstH2I RGCGCY 1 cut(s) 1200
BstHHI GCGC 1 cut(s) 1199
BstKTI GATC 5 cut(s) 627, 675, 834, 987, 1099
BstMAI GTCTC 2 cut(s) 571, 1107
BstMBI GATC 5 cut(s) 624, 672, 831, 984, 1096
BstMCI CGRYCG 2 cut(s) 613, 675
BstMWI GCNNNNNNNGC 7 cut(s) 59, 74, 723, 996, 1059, 1196, 1205
BstNI CCWGG 4 cut(s) 117, 134, 723, 1059
BstNSI RCATGY 3 cut(s) 165, 1023, 1053
BstPAI GACNNNNGTC 1 cut(s) 1119
BstPI GGTNACC 1 cut(s) 911
BstSCI CCNGG 4 cut(s) 115, 132, 721, 1057
BstSLI GKGCMC 1 cut(s) 1019
BstUI CGCG 1 cut(s) 1167
BstV1I GCAGC 7 cut(s) 64, 235, 309, 1065, 1186, 1189, 1192
BstXI CCANNNNNNTGG 1 cut(s) 484
BstZ17I GTATAC 1 cut(s) 1107
Bsu36I CCTNAGG 1 cut(s) 576
BsuRI GGCC 5 cut(s) 381, 721, 726, 844, 1062
BtgI CCRYGG 3 cut(s) 727, 897, 944
BtrI CACGTC 2 cut(s) 340, 520
BtsCI GGATG 2 cut(s) 53, 664
BtsI GCAGTG 2 cut(s) 633, 864
BtsIMutI CAGTG 2 cut(s) 633, 864
Cac8I GCNNGC 7 cut(s) 282, 302, 719, 846, 1047, 1051, 1064
CaiI CAGNNNCTG 2 cut(s) 122, 1037
CfoI GCGC 1 cut(s) 1199
Cfr10I RCCGGY 1 cut(s) 1193
Cfr13I GGNCC 4 cut(s) 236, 691, 719, 1121
CseI GACGC 1 cut(s) 167
Csp6I GTAC 5 cut(s) 464, 684, 757, 937, 1023
CviAII CATG 8 cut(s) 162, 586, 840, 898, 945, 1020, 1050, 1068
CviQI GTAC 5 cut(s) 464, 684, 757, 937, 1023
DdeI CTNAG 3 cut(s) 82, 568, 576
DpnI GATC 5 cut(s) 626, 674, 833, 986, 1098
DpnII GATC 5 cut(s) 624, 672, 831, 984, 1096
DraI TTTAAA 1 cut(s) 232
EaeI YGGCCR 2 cut(s) 379, 724
Eco130I CCWWGG 6 cut(s) 268, 382, 687, 748, 897, 944
Eco147I AGGCCT 1 cut(s) 1062
Eco24I GRGCYC 1 cut(s) 351
Eco47I GGWCC 3 cut(s) 236, 691, 1121
Eco57I CTGAAG 1 cut(s) 512
Eco81I CCTNAGG 1 cut(s) 576
Eco91I GGTNACC 1 cut(s) 911
EcoO109I RGGNCCY 3 cut(s) 236, 691, 1121
EcoO65I GGTNACC 1 cut(s) 911
EcoRI GAATTC 1 cut(s) 600
EcoRII CCWGG 4 cut(s) 115, 132, 721, 1057
EcoT14I CCWWGG 6 cut(s) 268, 382, 687, 748, 897, 944
EcoT38I GRGCYC 1 cut(s) 351
ErhI CCWWGG 6 cut(s) 268, 382, 687, 748, 897, 944
Esp3I CGTCTC 1 cut(s) 571
FaeI CATG 8 cut(s) 165, 589, 843, 901, 948, 1023, 1053, 1071
FatI CATG 8 cut(s) 161, 585, 839, 897, 944, 1019, 1049, 1067
FauI CCCGC 1 cut(s) 710
FblI GTMKAC 2 cut(s) 342, 1106
Fnu4HI GCNGC 7 cut(s) 78, 249, 298, 1054, 1200, 1203, 1206
FokI GGATG 2 cut(s) 40, 671
FriOI GRGCYC 1 cut(s) 351
Fsp4HI GCNGC 7 cut(s) 78, 249, 298, 1054, 1200, 1203, 1206
GlaI GCGC 1 cut(s) 1198
GluI GCNGC 7 cut(s) 78, 249, 298, 1054, 1200, 1203, 1206
GsuI CTGGAG 2 cut(s) 270, 1131
HaeII RGCGCY 1 cut(s) 1200
HaeIII GGCC 5 cut(s) 381, 721, 726, 844, 1062
HapII CCGG 2 cut(s) 780, 1194
HgaI GACGC 1 cut(s) 167
HhaI GCGC 1 cut(s) 1199
Hin1II CATG 8 cut(s) 165, 589, 843, 901, 948, 1023, 1053, 1071
Hin6I GCGC 1 cut(s) 1197
HinP1I GCGC 1 cut(s) 1197
HincII GTYRAC 1 cut(s) 343
HindII GTYRAC 1 cut(s) 343
HindIII AAGCTT 1 cut(s) 1043
HpaII CCGG 2 cut(s) 780, 1194
HphI GGTGA 4 cut(s) 343, 460, 688, 689
Hpy166II GTNNAC 2 cut(s) 343, 1107
Hpy188I TCNGA 3 cut(s) 124, 531, 874
Hpy188III TCNNGA 3 cut(s) 307, 742, 1003
Hpy8I GTNNAC 2 cut(s) 343, 1107
Hpy99I CGWCG 2 cut(s) 344, 347
HpyAV CCTTC 5 cut(s) 139, 304, 535, 747, 981
HpyCH4III ACNGT 4 cut(s) 393, 565, 683, 700
HpyCH4IV ACGT 5 cut(s) 339, 462, 489, 519, 708
HpyF10VI GCNNNNNNNGC 7 cut(s) 59, 74, 723, 996, 1059, 1196, 1205
HpyF3I CTNAG 3 cut(s) 82, 568, 576
HpySE526I ACGT 5 cut(s) 339, 462, 489, 519, 708
Hsp92II CATG 8 cut(s) 165, 589, 843, 901, 948, 1023, 1053, 1071
HspAI GCGC 1 cut(s) 1197
KpnI GGTACC 2 cut(s) 687, 760
Kzo9I GATC 5 cut(s) 624, 672, 831, 984, 1096
LmnI GCTCC 5 cut(s) 270, 289, 309, 386, 744
Lsp1109I GCAGC 7 cut(s) 64, 235, 309, 1065, 1186, 1189, 1192
LweI GCATC 3 cut(s) 62, 176, 792
MaeII ACGT 5 cut(s) 339, 462, 489, 519, 708
MaeIII GTNAC 8 cut(s) 88, 490, 649, 677, 700, 709, 911, 1088
MalI GATC 5 cut(s) 626, 674, 833, 986, 1098
MboI GATC 5 cut(s) 624, 672, 831, 984, 1096
MboII GAAGA 2 cut(s) 518, 779
MhlI GDGCHC 3 cut(s) 351, 391, 1019
MlsI TGGCCA 2 cut(s) 381, 726
MluCI AATT 8 cut(s) 186, 448, 472, 480, 511, 600, 1082, 1158
MluNI TGGCCA 2 cut(s) 381, 726
MnlI CCTC 9 cut(s) 447, 704, 757, 822, 880, 880, 932, 1141, 1188
Mox20I TGGCCA 2 cut(s) 381, 726
MscI TGGCCA 2 cut(s) 381, 726
MseI TTAA 5 cut(s) 231, 447, 792, 903, 981
Msp20I TGGCCA 2 cut(s) 381, 726
MspI CCGG 2 cut(s) 780, 1194
MspR9I CCNGG 4 cut(s) 117, 134, 723, 1059
Mva1269I GAATGC 1 cut(s) 959
MvaI CCWGG 4 cut(s) 117, 134, 723, 1059
MvnI CGCG 1 cut(s) 1167
MwoI GCNNNNNNNGC 7 cut(s) 59, 74, 723, 996, 1059, 1196, 1205
NcoI CCATGG 2 cut(s) 897, 944
NdeII GATC 5 cut(s) 624, 672, 831, 984, 1096
NlaIII CATG 8 cut(s) 165, 589, 843, 901, 948, 1023, 1053, 1071
NlaIV GGNNCC 6 cut(s) 285, 458, 685, 746, 758, 969
NmuCI GTSAC 4 cut(s) 88, 677, 700, 1088
NspI RCATGY 3 cut(s) 165, 1023, 1053
PaeI GCATGC 1 cut(s) 1053
PceI AGGCCT 1 cut(s) 1062
PciI ACATGT 1 cut(s) 1019
PctI GAATGC 1 cut(s) 959
PflFI GACNNNGTC 1 cut(s) 338
PflMI CCANNNNNTGG 1 cut(s) 293
PkrI GCNGC 7 cut(s) 79, 250, 299, 1055, 1201, 1204, 1207
Ple19I CGATCG 1 cut(s) 675
Ppu21I YACGTR 1 cut(s) 463
PpuMI RGGWCCY 3 cut(s) 236, 691, 1121
PscI ACATGT 1 cut(s) 1019
PshAI GACNNNNGTC 1 cut(s) 1119
PshBI ATTAAT 1 cut(s) 447
Psp1406I AACGTT 1 cut(s) 708
Psp5II RGGWCCY 3 cut(s) 236, 691, 1121
Psp6I CCWGG 4 cut(s) 115, 132, 721, 1057
PspEI GGTNACC 1 cut(s) 911
PspGI CCWGG 4 cut(s) 115, 132, 721, 1057
PspN4I GGNNCC 6 cut(s) 285, 458, 685, 746, 758, 969
PspPI GGNCC 4 cut(s) 236, 691, 719, 1121
PspPPI RGGWCCY 3 cut(s) 236, 691, 1121
PstNI CAGNNNCTG 2 cut(s) 122, 1037
PsyI GACNNNGTC 1 cut(s) 338
PvuI CGATCG 1 cut(s) 675
RsaI GTAC 5 cut(s) 465, 685, 758, 938, 1024
RsaNI GTAC 5 cut(s) 464, 684, 757, 937, 1023
SalI GTCGAC 1 cut(s) 341
SaqAI TTAA 5 cut(s) 231, 447, 792, 903, 981
SatI GCNGC 7 cut(s) 78, 249, 298, 1054, 1200, 1203, 1206
Sau3AI GATC 5 cut(s) 624, 672, 831, 984, 1096
Sau96I GGNCC 4 cut(s) 236, 691, 719, 1121
ScaI AGTACT 1 cut(s) 938
ScrFI CCNGG 4 cut(s) 117, 134, 723, 1059
SduI GDGCHC 3 cut(s) 351, 391, 1019
SfaNI GCATC 3 cut(s) 62, 176, 792
SgrDI CGTCGACG 1 cut(s) 341
SinI GGWCC 3 cut(s) 236, 691, 1121
SmlI CTYRAG 1 cut(s) 1100
SmoI CTYRAG 1 cut(s) 1100
SphI GCATGC 1 cut(s) 1053
Sse9I AATT 8 cut(s) 186, 448, 472, 480, 511, 600, 1082, 1158
SseBI AGGCCT 1 cut(s) 1062
SsiI CCGC 1 cut(s) 717
SspI AATATT 2 cut(s) 207, 790
StuI AGGCCT 1 cut(s) 1062
StyD4I CCNGG 4 cut(s) 115, 132, 721, 1057
StyI CCWWGG 6 cut(s) 268, 382, 687, 748, 897, 944
TaaI ACNGT 4 cut(s) 393, 565, 683, 700
TaiI ACGT 5 cut(s) 342, 465, 492, 522, 711
TaqI TCGA 2 cut(s) 342, 671
TaqII GACCGA 1 cut(s) 599
TasI AATT 8 cut(s) 186, 448, 472, 480, 511, 600, 1082, 1158
TatI WGTACW 1 cut(s) 936
Tru1I TTAA 5 cut(s) 231, 447, 792, 903, 981
Tru9I TTAA 5 cut(s) 231, 447, 792, 903, 981
TscAI CASTG 2 cut(s) 640, 871
TseFI GTSAC 4 cut(s) 88, 677, 700, 1088
TseI GCWGC 7 cut(s) 77, 248, 297, 1053, 1199, 1202, 1205
Tsp45I GTSAC 4 cut(s) 88, 677, 700, 1088
TspDTI ATGAA 1 cut(s) 602
TspRI CASTG 2 cut(s) 640, 871
Tth111I GACNNNGTC 1 cut(s) 338
Van91I CCANNNNNTGG 1 cut(s) 293
VpaK11BI GGWCC 3 cut(s) 236, 691, 1121
VspI ATTAAT 1 cut(s) 447
XapI RAATTY 3 cut(s) 480, 511, 600
XceI RCATGY 3 cut(s) 165, 1023, 1053
XmiI GTMKAC 2 cut(s) 342, 1106
ZrmI AGTACT 1 cut(s) 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.