Exopolygalacturonase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Glyco_hydro_28 | PF00295 | 56 - 375 | 3.1e-89 | Glycosyl hydrolases family 28 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 695 |
| AciI | CCGC | 2 cut(s) | 204, 684 |
| AclI | AACGTT | 2 cut(s) | 278, 492 |
| AclWI | GGATC | 1 cut(s) | 806 |
| AcoI | YGGCCR | 3 cut(s) | 179, 298, 809 |
| AdeI | CACNNNGTG | 1 cut(s) | 853 |
| AfaI | GTAC | 3 cut(s) | 79, 341, 1111 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 296, 393, 695, 746, 827 |
| AgeI | ACCGGT | 3 cut(s) | 213, 739, 827 |
| AgsI | TTSAA | 1 cut(s) | 490 |
| AjiI | CACGTC | 1 cut(s) | 91 |
| AjnI | CCWGG | 3 cut(s) | 323, 688, 910 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 305, 337 |
| AluBI | AGCT | 6 cut(s) | 56, 62, 287, 474, 552, 661 |
| AluI | AGCT | 6 cut(s) | 56, 62, 287, 474, 552, 661 |
| Alw21I | GWGCWC | 1 cut(s) | 554 |
| Alw26I | GTCTC | 1 cut(s) | 822 |
| AlwI | GGATC | 1 cut(s) | 806 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 765 |
| AoxI | GGCC | 6 cut(s) | 179, 298, 691, 748, 809, 834 |
| ApeKI | GCWGC | 1 cut(s) | 53 |
| AsiGI | ACCGGT | 3 cut(s) | 213, 739, 827 |
| AspLEI | GCGC | 1 cut(s) | 101 |
| AspS9I | GGNCC | 2 cut(s) | 239, 686 |
| AsuC2I | CCSGG | 1 cut(s) | 813 |
| AsuHPI | GGTGA | 3 cut(s) | 165, 427, 656 |
| AsuNHI | GCTAGC | 1 cut(s) | 49 |
| AvaII | GGWCC | 2 cut(s) | 239, 686 |
| BalI | TGGCCA | 1 cut(s) | 300 |
| BanII | GRGCYC | 1 cut(s) | 554 |
| BauI | CACGAG | 1 cut(s) | 308 |
| Bbv12I | GWGCWC | 1 cut(s) | 554 |
| BbvI | GCAGC | 1 cut(s) | 65 |
| BccI | CCATC | 9 cut(s) | 89, 290, 374, 539, 557, 641, 647, 893, 1036 |
| BceAI | ACGGC | 1 cut(s) | 989 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1048, 1082 |
| BciT130I | CCWGG | 3 cut(s) | 325, 690, 912 |
| BcnI | CCSGG | 1 cut(s) | 813 |
| BcoDI | GTCTC | 1 cut(s) | 822 |
| BfaI | CTAG | 2 cut(s) | 50, 1181 |
| BfmI | CTRYAG | 1 cut(s) | 57 |
| BisI | GCNGC | 2 cut(s) | 54, 205 |
| BlsI | GCNGC | 2 cut(s) | 55, 206 |
| Bme1390I | CCNGG | 4 cut(s) | 325, 690, 813, 912 |
| Bme18I | GGWCC | 2 cut(s) | 239, 686 |
| BmgBI | CACGTC | 1 cut(s) | 91 |
| BmgT120I | GGNCC | 2 cut(s) | 239, 686 |
| BmiI | GGNNCC | 2 cut(s) | 385, 619 |
| BmrFI | CCNGG | 4 cut(s) | 325, 690, 813, 912 |
| BmsI | GCATC | 3 cut(s) | 127, 151, 1001 |
| BmtI | GCTAGC | 1 cut(s) | 53 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1135, 1167 |
| Bpu10I | CCTNAGC | 2 cut(s) | 142, 475 |
| BpuEI | CTTGAG | 1 cut(s) | 981 |
| BpuMI | CCSGG | 1 cut(s) | 813 |
| BsaBI | GATNNNNATC | 1 cut(s) | 20 |
| BsaI | GGTCTC | 1 cut(s) | 822 |
| BsaJI | CCNNGG | 8 cut(s) | 176, 271, 324, 388, 694, 812, 910, 911 |
| BsaWI | WCCGGW | 4 cut(s) | 213, 620, 739, 827 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 296, 393, 695, 746, 827 |
| Bse118I | RCCGGY | 3 cut(s) | 213, 739, 827 |
| Bse3DI | GCAATG | 1 cut(s) | 573 |
| Bse8I | GATNNNNATC | 1 cut(s) | 20 |
| BseBI | CCWGG | 3 cut(s) | 325, 690, 912 |
| BseDI | CCNNGG | 8 cut(s) | 176, 271, 324, 388, 694, 812, 910, 911 |
| BseGI | GGATG | 1 cut(s) | 531 |
| BseJI | GATNNNNATC | 1 cut(s) | 20 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 296, 393, 695, 746, 827 |
| BseMI | GCAATG | 1 cut(s) | 573 |
| BseMII | CTCAG | 1 cut(s) | 489 |
| BseRI | GAGGAG | 2 cut(s) | 237, 381 |
| BseXI | GCAGC | 1 cut(s) | 65 |
| BseYI | CCCAGC | 1 cut(s) | 69 |
| BsgI | GTGCAG | 3 cut(s) | 751, 896, 1187 |
| BshFI | GGCC | 6 cut(s) | 181, 300, 693, 750, 811, 836 |
| BshTI | ACCGGT | 3 cut(s) | 213, 739, 827 |
| BsiHKAI | GWGCWC | 1 cut(s) | 554 |
| BsiSI | CCGG | 5 cut(s) | 214, 621, 740, 812, 828 |
| BslFI | GGGAC | 1 cut(s) | 1160 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 296, 393, 695, 746, 827 |
| BsmAI | GTCTC | 1 cut(s) | 822 |
| BsmFI | GGGAC | 1 cut(s) | 1160 |
| BsnI | GGCC | 6 cut(s) | 181, 300, 693, 750, 811, 836 |
| Bso31I | GGTCTC | 1 cut(s) | 822 |
| Bsp1286I | GDGCHC | 1 cut(s) | 554 |
| Bsp143I | GATC | 3 cut(s) | 508, 798, 1063 |
| Bsp19I | CCATGG | 2 cut(s) | 176, 694 |
| BspACI | CCGC | 2 cut(s) | 204, 684 |
| BspANI | GGCC | 6 cut(s) | 181, 300, 693, 750, 811, 836 |
| BspCNI | CTCAG | 1 cut(s) | 488 |
| BspLI | GGNNCC | 2 cut(s) | 385, 619 |
| BspOI | GCTAGC | 1 cut(s) | 53 |
| BspPI | GGATC | 1 cut(s) | 806 |
| BspQI | GCTCTTC | 2 cut(s) | 359, 542 |
| BspTNI | GGTCTC | 1 cut(s) | 822 |
| BsrDI | GCAATG | 1 cut(s) | 573 |
| BsrFI | RCCGGY | 3 cut(s) | 213, 739, 827 |
| BssAI | RCCGGY | 3 cut(s) | 213, 739, 827 |
| BssECI | CCNNGG | 8 cut(s) | 176, 271, 324, 388, 694, 812, 910, 911 |
| BssMI | GATC | 3 cut(s) | 508, 798, 1063 |
| BssSI | CACGAG | 1 cut(s) | 308 |
| BssT1I | CCWWGG | 4 cut(s) | 176, 271, 388, 694 |
| Bst2BI | CACGAG | 1 cut(s) | 308 |
| Bst2UI | CCWGG | 3 cut(s) | 325, 690, 912 |
| Bst4CI | ACNGT | 1 cut(s) | 1076 |
| Bst6I | CTCTTC | 2 cut(s) | 359, 542 |
| BstC8I | GCNNGC | 3 cut(s) | 51, 285, 1159 |
| BstDEI | CTNAG | 3 cut(s) | 142, 475, 654 |
| BstDSI | CCRYGG | 2 cut(s) | 176, 694 |
| BstF5I | GGATG | 1 cut(s) | 531 |
| BstHHI | GCGC | 1 cut(s) | 101 |
| BstKTI | GATC | 3 cut(s) | 511, 801, 1066 |
| BstMAI | GTCTC | 1 cut(s) | 822 |
| BstMBI | GATC | 3 cut(s) | 508, 798, 1063 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 59, 690 |
| BstNI | CCWGG | 3 cut(s) | 325, 690, 912 |
| BstNSI | RCATGY | 1 cut(s) | 1020 |
| BstSCI | CCNGG | 4 cut(s) | 323, 688, 811, 910 |
| BstSFI | CTRYAG | 1 cut(s) | 57 |
| BstV1I | GCAGC | 1 cut(s) | 65 |
| BsuRI | GGCC | 6 cut(s) | 181, 300, 693, 750, 811, 836 |
| BtgI | CCRYGG | 2 cut(s) | 176, 694 |
| BtrI | CACGTC | 1 cut(s) | 91 |
| BtsCI | GGATG | 1 cut(s) | 531 |
| BtsIMutI | CAGTG | 1 cut(s) | 1081 |
| Cac8I | GCNNGC | 3 cut(s) | 51, 285, 1159 |
| CaiI | CAGNNNCTG | 1 cut(s) | 765 |
| CfoI | GCGC | 1 cut(s) | 101 |
| Cfr10I | RCCGGY | 3 cut(s) | 213, 739, 827 |
| Cfr13I | GGNCC | 2 cut(s) | 239, 686 |
| CseI | GACGC | 1 cut(s) | 1157 |
| Csp6I | GTAC | 3 cut(s) | 78, 340, 1110 |
| CspAI | ACCGGT | 3 cut(s) | 213, 739, 827 |
| CviAII | CATG | 9 cut(s) | 25, 37, 177, 506, 585, 695, 807, 1017, 1035 |
| CviQI | GTAC | 3 cut(s) | 78, 340, 1110 |
| DdeI | CTNAG | 3 cut(s) | 142, 475, 654 |
| DpnI | GATC | 3 cut(s) | 510, 800, 1065 |
| DpnII | GATC | 3 cut(s) | 508, 798, 1063 |
| DraI | TTTAAA | 1 cut(s) | 235 |
| DraIII | CACNNNGTG | 1 cut(s) | 853 |
| EaeI | YGGCCR | 3 cut(s) | 179, 298, 809 |
| Eam1104I | CTCTTC | 2 cut(s) | 359, 542 |
| EarI | CTCTTC | 2 cut(s) | 359, 542 |
| Ecl136II | GAGCTC | 1 cut(s) | 552 |
| Eco130I | CCWWGG | 4 cut(s) | 176, 271, 388, 694 |
| Eco24I | GRGCYC | 1 cut(s) | 554 |
| Eco31I | GGTCTC | 1 cut(s) | 822 |
| Eco47I | GGWCC | 2 cut(s) | 239, 686 |
| Eco53kI | GAGCTC | 1 cut(s) | 552 |
| EcoICRI | GAGCTC | 1 cut(s) | 552 |
| EcoO109I | RGGNCCY | 1 cut(s) | 239 |
| EcoRII | CCWGG | 3 cut(s) | 323, 688, 910 |
| EcoT14I | CCWWGG | 4 cut(s) | 176, 271, 388, 694 |
| EcoT38I | GRGCYC | 1 cut(s) | 554 |
| ErhI | CCWWGG | 4 cut(s) | 176, 271, 388, 694 |
| FaeI | CATG | 9 cut(s) | 28, 40, 180, 509, 588, 698, 810, 1020, 1038 |
| FaqI | GGGAC | 1 cut(s) | 1160 |
| FatI | CATG | 9 cut(s) | 24, 36, 176, 505, 584, 694, 806, 1016, 1034 |
| FauNDI | CATATG | 1 cut(s) | 106 |
| Fnu4HI | GCNGC | 2 cut(s) | 54, 205 |
| FokI | GGATG | 1 cut(s) | 518 |
| FriOI | GRGCYC | 1 cut(s) | 554 |
| Fsp4HI | GCNGC | 2 cut(s) | 54, 205 |
| FspBI | CTAG | 2 cut(s) | 50, 1181 |
| GlaI | GCGC | 1 cut(s) | 100 |
| GluI | GCNGC | 2 cut(s) | 54, 205 |
| GsaI | CCCAGC | 1 cut(s) | 73 |
| HaeIII | GGCC | 6 cut(s) | 181, 300, 693, 750, 811, 836 |
| HapII | CCGG | 5 cut(s) | 214, 621, 740, 812, 828 |
| HgaI | GACGC | 1 cut(s) | 1157 |
| HhaI | GCGC | 1 cut(s) | 101 |
| Hin1II | CATG | 9 cut(s) | 28, 40, 180, 509, 588, 698, 810, 1020, 1038 |
| Hin6I | GCGC | 1 cut(s) | 99 |
| HinP1I | GCGC | 1 cut(s) | 99 |
| HincII | GTYRAC | 2 cut(s) | 1009, 1138 |
| HindII | GTYRAC | 2 cut(s) | 1009, 1138 |
| HinfI | GANTC | 5 cut(s) | 189, 320, 567, 591, 966 |
| HpaI | GTTAAC | 1 cut(s) | 1138 |
| HpaII | CCGG | 5 cut(s) | 214, 621, 740, 812, 828 |
| HphI | GGTGA | 3 cut(s) | 165, 427, 656 |
| Hpy166II | GTNNAC | 3 cut(s) | 313, 1009, 1138 |
| Hpy188I | TCNGA | 6 cut(s) | 319, 396, 617, 965, 980, 1026 |
| Hpy188III | TCNNGA | 7 cut(s) | 290, 310, 452, 760, 775, 802, 970 |
| Hpy8I | GTNNAC | 3 cut(s) | 313, 1009, 1138 |
| HpyAV | CCTTC | 1 cut(s) | 781 |
| HpyCH4III | ACNGT | 1 cut(s) | 1076 |
| HpyCH4IV | ACGT | 7 cut(s) | 90, 278, 417, 492, 580, 597, 1140 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 59, 690 |
| HpyF3I | CTNAG | 3 cut(s) | 142, 475, 654 |
| HpySE526I | ACGT | 7 cut(s) | 90, 278, 417, 492, 580, 597, 1140 |
| Hsp92II | CATG | 9 cut(s) | 28, 40, 180, 509, 588, 698, 810, 1020, 1038 |
| HspAI | GCGC | 1 cut(s) | 99 |
| KspAI | GTTAAC | 1 cut(s) | 1138 |
| Kzo9I | GATC | 3 cut(s) | 508, 798, 1063 |
| LguI | GCTCTTC | 2 cut(s) | 359, 542 |
| LmnI | GCTCC | 4 cut(s) | 224, 256, 292, 389 |
| Lsp1109I | GCAGC | 1 cut(s) | 65 |
| LweI | GCATC | 3 cut(s) | 127, 151, 1001 |
| MaeI | CTAG | 2 cut(s) | 50, 1181 |
| MaeII | ACGT | 7 cut(s) | 90, 278, 417, 492, 580, 597, 1140 |
| MaeIII | GTNAC | 6 cut(s) | 91, 433, 598, 667, 823, 956 |
| MalI | GATC | 3 cut(s) | 510, 800, 1065 |
| MboI | GATC | 3 cut(s) | 508, 798, 1063 |
| MboII | GAAGA | 3 cut(s) | 305, 346, 559 |
| MfeI | CAATTG | 1 cut(s) | 1131 |
| MhlI | GDGCHC | 1 cut(s) | 554 |
| MlsI | TGGCCA | 1 cut(s) | 300 |
| MluCI | AATT | 5 cut(s) | 121, 400, 447, 679, 1131 |
| MluNI | TGGCCA | 1 cut(s) | 300 |
| MlyI | GAGTC | 1 cut(s) | 183 |
| MmeI | TCCRAC | 2 cut(s) | 374, 688 |
| Mox20I | TGGCCA | 1 cut(s) | 300 |
| MscI | TGGCCA | 1 cut(s) | 300 |
| MslI | CAYNNNNRTG | 2 cut(s) | 416, 583 |
| Msp20I | TGGCCA | 1 cut(s) | 300 |
| MspI | CCGG | 5 cut(s) | 214, 621, 740, 812, 828 |
| MspR9I | CCNGG | 4 cut(s) | 325, 690, 813, 912 |
| MunI | CAATTG | 1 cut(s) | 1131 |
| MvaI | CCWGG | 3 cut(s) | 325, 690, 912 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 59, 690 |
| NciI | CCSGG | 1 cut(s) | 813 |
| NcoI | CCATGG | 2 cut(s) | 176, 694 |
| NdeI | CATATG | 1 cut(s) | 106 |
| NdeII | GATC | 3 cut(s) | 508, 798, 1063 |
| NheI | GCTAGC | 1 cut(s) | 49 |
| NlaIII | CATG | 9 cut(s) | 28, 40, 180, 509, 588, 698, 810, 1020, 1038 |
| NlaIV | GGNNCC | 2 cut(s) | 385, 619 |
| NmeAIII | GCCGAG | 2 cut(s) | 207, 422 |
| NmuCI | GTSAC | 2 cut(s) | 91, 433 |
| NspI | RCATGY | 1 cut(s) | 1020 |
| PasI | CCCWGGG | 1 cut(s) | 911 |
| PciSI | GCTCTTC | 2 cut(s) | 359, 542 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 423 |
| PfeI | GAWTC | 4 cut(s) | 320, 567, 591, 966 |
| PflFI | GACNNNGTC | 1 cut(s) | 431 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 695 |
| PinAI | ACCGGT | 3 cut(s) | 213, 739, 827 |
| PkrI | GCNGC | 2 cut(s) | 55, 206 |
| PleI | GAGTC | 1 cut(s) | 183 |
| PpsI | GAGTC | 1 cut(s) | 183 |
| PpuMI | RGGWCCY | 1 cut(s) | 239 |
| Psp124BI | GAGCTC | 1 cut(s) | 554 |
| Psp1406I | AACGTT | 2 cut(s) | 278, 492 |
| Psp5II | RGGWCCY | 1 cut(s) | 239 |
| Psp6I | CCWGG | 3 cut(s) | 323, 688, 910 |
| PspFI | CCCAGC | 1 cut(s) | 69 |
| PspGI | CCWGG | 3 cut(s) | 323, 688, 910 |
| PspN4I | GGNNCC | 2 cut(s) | 385, 619 |
| PspPI | GGNCC | 2 cut(s) | 239, 686 |
| PspPPI | RGGWCCY | 1 cut(s) | 239 |
| PstNI | CAGNNNCTG | 1 cut(s) | 765 |
| PsyI | GACNNNGTC | 1 cut(s) | 431 |
| RsaI | GTAC | 3 cut(s) | 79, 341, 1111 |
| RsaNI | GTAC | 3 cut(s) | 78, 340, 1110 |
| RseI | CAYNNNNRTG | 2 cut(s) | 416, 583 |
| SacI | GAGCTC | 1 cut(s) | 554 |
| SapI | GCTCTTC | 2 cut(s) | 359, 542 |
| SatI | GCNGC | 2 cut(s) | 54, 205 |
| Sau3AI | GATC | 3 cut(s) | 508, 798, 1063 |
| Sau96I | GGNCC | 2 cut(s) | 239, 686 |
| SchI | GAGTC | 1 cut(s) | 183 |
| ScrFI | CCNGG | 4 cut(s) | 325, 690, 813, 912 |
| SduI | GDGCHC | 1 cut(s) | 554 |
| SfaNI | GCATC | 3 cut(s) | 127, 151, 1001 |
| SfcI | CTRYAG | 1 cut(s) | 57 |
| SinI | GGWCC | 2 cut(s) | 239, 686 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 416, 583 |
| SmlI | CTYRAG | 1 cut(s) | 996 |
| SmoI | CTYRAG | 1 cut(s) | 996 |
| Sse9I | AATT | 5 cut(s) | 121, 400, 447, 679, 1131 |
| SsiI | CCGC | 2 cut(s) | 204, 684 |
| SspMI | CTAG | 2 cut(s) | 50, 1181 |
| SstI | GAGCTC | 1 cut(s) | 554 |
| StyD4I | CCNGG | 4 cut(s) | 323, 688, 811, 910 |
| StyI | CCWWGG | 4 cut(s) | 176, 271, 388, 694 |
| TaaI | ACNGT | 1 cut(s) | 1076 |
| TaiI | ACGT | 7 cut(s) | 93, 281, 420, 495, 583, 600, 1143 |
| TaqI | TCGA | 4 cut(s) | 426, 554, 941, 1090 |
| TasI | AATT | 5 cut(s) | 121, 400, 447, 679, 1131 |
| TatI | WGTACW | 2 cut(s) | 339, 1109 |
| TauI | GCSGC | 1 cut(s) | 207 |
| TfiI | GAWTC | 4 cut(s) | 320, 567, 591, 966 |
| TscAI | CASTG | 1 cut(s) | 1081 |
| TseFI | GTSAC | 2 cut(s) | 91, 433 |
| TseI | GCWGC | 1 cut(s) | 53 |
| Tsp45I | GTSAC | 2 cut(s) | 91, 433 |
| TspDTI | ATGAA | 5 cut(s) | 25, 32, 573, 747, 881 |
| TspRI | CASTG | 1 cut(s) | 1081 |
| Tth111I | GACNNNGTC | 1 cut(s) | 431 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 695 |
| VpaK11BI | GGWCC | 2 cut(s) | 239, 686 |
| XceI | RCATGY | 1 cut(s) | 1020 |
| XspI | CTAG | 2 cut(s) | 50, 1181 |