FvH4_2g02350

Exopolygalacturonase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000434
Physical Location & Seq
Reverse (-)
1924695 .. 1926303
1609 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g02350.t1

Sequence Viewer

Length: 1497 bp
ATGGATCAGAAATTGATGAACGTCTTGACAATATCTTTCTTGTTAGTGTTGGCGTTTACACCAGTTCATTCCTCTGTCTTCTTCGACGTGACTAGTGCAAAATATGGTGGAAAACCAAACACAGACATTACAAAGGCTTTGCTGAATGCTTGGACTGATGCATGCGCATCGCCGTGGGAGAGTACAATTTATGTTCCAAAAGGCACCTACGGATTAAAAGGAGCAATTTTCGTAGGTCATTGCAAGGCTCCTATTGAGCTTCAGGTTGAAGGCACATTGCAGGCTCCAGAAGAAACCGGCCAAGTCACATCACCGGATACTTGGGTTGGTTTTCGGTACCTTAATAGGCTCACTTTGTCAGGTGGTGGAACTTTTGATGGCCGCGGAGCACTCTCTTGGAAACAAAACGACTGTAACACAAACAAAAACTGCAAATCTCGGGTTGTGAATATAAGGTTCGACTTCGTCAACGATACAATAATCAAGGACATAACTTCACTTGACAGCAAGAACTTTCACTTCAACGTTTTCGCCTGCAACAATATTACATTCCAACATGCAACCATCACAGCACCTGGAGACAGTGTCAACACAGACGGTATCCACATTGCACGATCAACAATGGTCACCGTCGCCAACACAAGCATCGGAACCGGAGACGATTGTATCTCGCTCGGTGATGGGACTTCACAACTCAAATTTACCAATGTAACTTGCGGACCAGGCCACGGCATAAGCATTGGCAGCCTCGGAGGGCACCGCGATGAACAACCGGTAACTGGTGTCATAATCAAGAATGTAACATTCAACAGCACGCAGAATGGTGCAAGGATCAAGACGTGGCCGGGCTCTTATGGTGGTCTTGTGTCAGATATACACTATGAGGATATTATCATGGTGAATGTCAGCAACCCGATCATTATAGACCAAGAGTACTGCCCATGGAACTTGTGCAACAAGAAGATTCCTTCCAAAGTTAAGATCAGCAACGTGAGCTTCAAGAACATTAAGGGCACGTCCACAACTCCGCTTGCCGTAAACTTTATTTGTAGCTGGAGCGTGCCGTGCGAGAATGTGGAGATTTCCGGCATTGATCTCACGTACACCGGACACAAAGGATTTATCAGTTCACAATGCTCCAATGTCAAACTGGCGACCATTGCTAACGTGACAAAAGCTCTTGCTTGTGGTAACTATTCGCCGGCATCAAAGAACCACACCGAGGCTCATTCTCCAGAAATTAGCCGATCCGAGAACCAGACCGTGTCGAAAAACCAGACTGAAACTGTTGCAGGAAATCGGAATGAGCCGGCCAGAGTTGATCAACGTAAGTATCGTCGTCTGCTTATGACGTCCTCGGGACCAGAAAGTGATGATCGCTTTTTAAGAGTCACGTCCTCCGCTCCAAATAATCGCAGTACTTGTGGGTGGCTACAACCGAGGGCAATAGTGCAGCTCCTAAGGGGTTTCTGGCTTCCCCTACATGGGTGGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

499

Amino Acids

54.31

Weight (kDa)

8.56

Isoelectric Point (pI)

33.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_28 PF00295 55 - 383 1e-96 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000434)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07820 AT3G07830 AT3G07840 AT5G48140
fragaria_vesca FvH4_1g26811 FvH4_2g02350 FvH4_6g41380 FvH4_6g41380 FvH4_6g41380 FvH4_6g41430 FvH4_6g41740 FvH4_6g43060 FvH4_7g02910
malus_domestica MD00G1117700.v1.1 MD00G1117800.v1.1 MD00G1117900.v1.1 MD09G1120000.v1.1 MD09G1120100.v1.1 MD09G1120200.v1.1 MD09G1120300.v1.1 MD12G1142000.v1.1 MD13G1218300.v1.1 MD13G1220100.v1.1 MD13G1220200.v1.1 MD16G1223300.v1.1 MD16G1223500.v1.1 MD16G1223600.v1.1 MD17G1110800.v1.1
prunus_persica Prupe.1G044900_v2.0.a1 Prupe.1G045000_v2.0.a1 Prupe.1G167700_v2.0.a1 Prupe.2G005600_v2.0.a1 Prupe.2G005700_v2.0.a1 Prupe.2G008600_v2.0.a1 Prupe.2G009200_v2.0.a1 Prupe.2G009300_v2.0.a1 Prupe.2G009400_v2.0.a1 Prupe.3G109100_v2.0.a1 Prupe.3G109200_v2.0.a1 Prupe.3G109400_v2.0.a1 Prupe.3G109500_v2.0.a1 Prupe.3G109700_v2.0.a1 Prupe.3G203300_v2.0.a1 Prupe.3G203600_v2.0.a1 Prupe.3G203900_v2.0.a1 Prupe.3G204000_v2.0.a1 Prupe.3G204100_v2.0.a1 Prupe.3G204200_v2.0.a1
pyrus_communis pycom09g04480 pycom09g04490 pycom09g04500 pycom12g13680
rosa_chinensis RchiOBHm_Chr1g0323871 RchiOBHm_Chr2g0156921 RchiOBHm_Chr2g0159061 RchiOBHm_Chr6g0246271 RchiOBHm_Chr6g0246281
rosa_laevigata RLG00000015266 RLG00000020954 RLG00000021134 RLG00000030246 RLG00000030250 RLG00000030295
rosa_multiflora Rmu_co8098394.1_g000001 Rmu_co8404671.1_g000001 Rmu_sc0000507.1_g000021 Rmu_sc0001066.1_g000011 Rmu_sc0001066.1_g000015 Rmu_sc0009451.1_g000001 Rmu_ssc0000408.1_g000005
rosa_roxburghii Rroxscaffold_2G00090810 Rroxscaffold_2G00092580 Rroxscaffold_4G00326280 Rroxscaffold_7G00214720
rosa_rugosa Rorug01G0040400 Rorug02G0457200 Rorug05G0520000
rosa_samantha Rh1AG057700 Rh1BG048800 Rh1CG059100 Rh1DG063000 Rh2AG522900 Rh2BG536200 Rh2BG553200 Rh2CG507800 Rh2DG545200 Rh6AG034100 Rh6BG029300 Rh6DG028700
rosa_wichuraiana Rw0G023110 Rw1G004930 Rw2G043170 Rw2G044730 Rw6G002760 Rw6G002920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1355
Acc16I TGCGCA 1 cut(s) 166
Acc65I GGTACC 1 cut(s) 336
AccB1I GGYRCC 3 cut(s) 203, 336, 756
AccBSI CCGCTC 1 cut(s) 1403
AccII CGCG 2 cut(s) 384, 762
AciI CCGC 6 cut(s) 382, 384, 717, 760, 1028, 1401
AclI AACGTT 1 cut(s) 525
AclWI GGATC 3 cut(s) 12, 839, 1242
AcoI YGGCCR 4 cut(s) 298, 379, 842, 1311
AcsI RAATTY 1 cut(s) 698
AcuI CTGAAG 1 cut(s) 245
AcyI GRCGYC 1 cut(s) 1352
AfaI GTAC 5 cut(s) 184, 338, 935, 1103, 1420
AfiI CCNNNNNNNGG 5 cut(s) 728, 779, 1222, 1484, 1485
AgeI ACCGGT 1 cut(s) 772
AgsI TTSAA 4 cut(s) 269, 523, 808, 1000
AhlI ACTAGT 1 cut(s) 92
AjiI CACGTC 4 cut(s) 88, 840, 1017, 1395
AjnI CCWGG 2 cut(s) 574, 721
AluBI AGCT 5 cut(s) 259, 996, 1053, 1178, 1456
AluI AGCT 5 cut(s) 259, 996, 1053, 1178, 1456
Alw21I GWGCWC 1 cut(s) 391
Alw26I GTCTC 2 cut(s) 573, 651
AlwI GGATC 3 cut(s) 12, 839, 1242
AlwNI CAGNNNCTG 1 cut(s) 575
Ama87I CYCGRG 2 cut(s) 438, 1357
AoxI GGCC 5 cut(s) 298, 379, 724, 842, 1311
ApeKI GCWGC 2 cut(s) 744, 1453
ApoI RAATTY 1 cut(s) 698
AsiGI ACCGGT 1 cut(s) 772
Asp718I GGTACC 1 cut(s) 336
AspLEI GCGC 1 cut(s) 167
AspS9I GGNCC 2 cut(s) 719, 1361
AsuC2I CCSGG 1 cut(s) 846
AsuHPI GGTGA 4 cut(s) 303, 619, 689, 910
AvaI CYCGRG 2 cut(s) 438, 1357
AvaII GGWCC 2 cut(s) 719, 1361
AxyI CCTNAGG 1 cut(s) 1460
BaeGI GKGCMC 2 cut(s) 759, 1016
BaeI ACNNNNGTAYC 6 cut(s) 309, 342, 649, 682, 1316, 1349
BanI GGYRCC 3 cut(s) 203, 336, 756
BanII GRGCYC 1 cut(s) 851
BbsI GAAGAC 1 cut(s) 70
Bbv12I GWGCWC 1 cut(s) 391
BbvI GCAGC 2 cut(s) 756, 1465
BccI CCATC 3 cut(s) 371, 572, 674
BceAI ACGGC 4 cut(s) 157, 745, 1019, 1048
BcgI CGANNNNNNTGC 2 cut(s) 150, 184
BciT130I CCWGG 2 cut(s) 576, 723
BciVI GTATCC 2 cut(s) 310, 611
BclI TGATCA 1 cut(s) 1321
BcnI CCSGG 1 cut(s) 846
BcoDI GTCTC 2 cut(s) 573, 651
BcuI ACTAGT 1 cut(s) 92
BfaI CTAG 1 cut(s) 93
BfuI GTATCC 2 cut(s) 310, 611
BisI GCNGC 3 cut(s) 382, 745, 1454
BlsI GCNGC 3 cut(s) 383, 746, 1455
BmcAI AGTACT 2 cut(s) 935, 1420
Bme1390I CCNGG 3 cut(s) 576, 723, 846
Bme18I GGWCC 2 cut(s) 719, 1361
BmeT110I CYCGRG 2 cut(s) 438, 1357
BmgBI CACGTC 4 cut(s) 88, 840, 1017, 1395
BmgT120I GGNCC 2 cut(s) 719, 1361
BmiI GGNNCC 7 cut(s) 205, 249, 285, 338, 652, 758, 1362
BmrFI CCNGG 3 cut(s) 576, 723, 846
BmsI GCATC 4 cut(s) 148, 176, 654, 1214
BpiI GAAGAC 1 cut(s) 70
BpmI CTGGAG 4 cut(s) 270, 597, 1075, 1218
BpuMI CCSGG 1 cut(s) 846
BsaAI YACGTR 1 cut(s) 1101
BsaHI GRCGYC 1 cut(s) 1352
BsaJI CCNNGG 8 cut(s) 173, 382, 727, 748, 941, 1221, 1356, 1439
BsaWI WCCGGW 4 cut(s) 313, 653, 772, 1106
BsaXI ACNNNNNCTCC 2 cut(s) 570, 600
Bsc4I CCNNNNNNNGG 5 cut(s) 728, 779, 1222, 1484, 1485
Bse118I RCCGGY 4 cut(s) 296, 772, 1201, 1309
Bse1I ACTGG 3 cut(s) 62, 784, 1155
Bse21I CCTNAGG 1 cut(s) 1460
Bse3DI GCAATG 4 cut(s) 238, 275, 606, 1158
BseBI CCWGG 2 cut(s) 576, 723
BseDI CCNNGG 8 cut(s) 173, 382, 727, 748, 941, 1221, 1356, 1439
BseLI CCNNNNNNNGG 5 cut(s) 728, 779, 1222, 1484, 1485
BseMI GCAATG 4 cut(s) 238, 275, 606, 1158
BseNI ACTGG 3 cut(s) 62, 784, 1155
BseSI GKGCMC 2 cut(s) 759, 1016
BseXI GCAGC 2 cut(s) 756, 1465
BsgI GTGCAG 1 cut(s) 1472
Bsh1236I CGCG 2 cut(s) 384, 762
BshFI GGCC 5 cut(s) 300, 381, 726, 844, 1313
BshNI GGYRCC 3 cut(s) 203, 336, 756
BshTI ACCGGT 1 cut(s) 772
BsiHKAI GWGCWC 1 cut(s) 391
BsiHKCI CYCGRG 2 cut(s) 438, 1357
BsiSI CCGG 9 cut(s) 297, 314, 654, 773, 845, 1086, 1107, 1202, 1310
BslFI GGGAC 2 cut(s) 697, 1374
BslI CCNNNNNNNGG 5 cut(s) 728, 779, 1222, 1484, 1485
BsmAI GTCTC 2 cut(s) 573, 651
BsmBI CGTCTC 1 cut(s) 651
BsmFI GGGAC 2 cut(s) 697, 1374
BsmI GAATGC 1 cut(s) 151
BsnI GGCC 5 cut(s) 300, 381, 726, 844, 1313
BsoBI CYCGRG 2 cut(s) 438, 1357
Bsp1286I GDGCHC 4 cut(s) 391, 759, 851, 1016
Bsp143I GATC 9 cut(s) 4, 614, 831, 915, 981, 1093, 1247, 1321, 1375
Bsp19I CCATGG 1 cut(s) 941
BspACI CCGC 6 cut(s) 382, 384, 717, 760, 1028, 1401
BspANI GGCC 5 cut(s) 300, 381, 726, 844, 1313
BspFNI CGCG 2 cut(s) 384, 762
BspLI GGNNCC 7 cut(s) 205, 249, 285, 338, 652, 758, 1362
BspPI GGATC 3 cut(s) 12, 839, 1242
BspT107I GGYRCC 3 cut(s) 203, 336, 756
BsrBI CCGCTC 1 cut(s) 1403
BsrDI GCAATG 4 cut(s) 238, 275, 606, 1158
BsrFI RCCGGY 4 cut(s) 296, 772, 1201, 1309
BsrI ACTGG 3 cut(s) 62, 784, 1155
BssAI RCCGGY 4 cut(s) 296, 772, 1201, 1309
BssECI CCNNGG 8 cut(s) 173, 382, 727, 748, 941, 1221, 1356, 1439
BssMI GATC 9 cut(s) 4, 614, 831, 915, 981, 1093, 1247, 1321, 1375
BssNI GRCGYC 1 cut(s) 1352
BssT1I CCWWGG 1 cut(s) 941
Bst2UI CCWGG 2 cut(s) 576, 723
Bst4CI ACNGT 6 cut(s) 413, 584, 599, 631, 1264, 1288
BstACI GRCGYC 1 cut(s) 1352
BstBAI YACGTR 1 cut(s) 1101
BstC8I GCNNGC 8 cut(s) 163, 282, 535, 815, 1032, 1061, 1203, 1311
BstDEI CTNAG 1 cut(s) 1460
BstDSI CCRYGG 4 cut(s) 173, 382, 727, 941
BstEII GGTNACC 1 cut(s) 625
BstFNI CGCG 2 cut(s) 384, 762
BstHHI GCGC 1 cut(s) 167
BstKTI GATC 9 cut(s) 7, 617, 834, 918, 984, 1096, 1250, 1324, 1378
BstMAI GTCTC 2 cut(s) 573, 651
BstMBI GATC 9 cut(s) 4, 614, 831, 915, 981, 1093, 1247, 1321, 1375
BstMWI GCNNNNNNNGC 5 cut(s) 723, 744, 993, 1065, 1160
BstNI CCWGG 2 cut(s) 576, 723
BstNSI RCATGY 2 cut(s) 165, 560
BstPI GGTNACC 1 cut(s) 625
BstSCI CCNGG 3 cut(s) 574, 721, 844
BstSLI GKGCMC 2 cut(s) 759, 1016
BstUI CGCG 2 cut(s) 384, 762
BstV1I GCAGC 2 cut(s) 756, 1465
BstV2I GAAGAC 1 cut(s) 70
Bsu36I CCTNAGG 1 cut(s) 1460
BsuI GTATCC 2 cut(s) 310, 611
BsuRI GGCC 5 cut(s) 300, 381, 726, 844, 1313
BtgI CCRYGG 4 cut(s) 173, 382, 727, 941
BtgZI GCGATG 2 cut(s) 153, 777
BtrI CACGTC 4 cut(s) 88, 840, 1017, 1395
BtsIMutI CAGTG 1 cut(s) 589
Cac8I GCNNGC 8 cut(s) 163, 282, 535, 815, 1032, 1061, 1203, 1311
CaiI CAGNNNCTG 1 cut(s) 575
CfoI GCGC 1 cut(s) 167
Cfr10I RCCGGY 4 cut(s) 296, 772, 1201, 1309
Cfr13I GGNCC 2 cut(s) 719, 1361
Cfr42I CCGCGG 1 cut(s) 385
Csp6I GTAC 5 cut(s) 183, 337, 934, 1102, 1419
CspAI ACCGGT 1 cut(s) 772
CviAII CATG 5 cut(s) 162, 557, 895, 942, 1484
CviQI GTAC 5 cut(s) 183, 337, 934, 1102, 1419
DdeI CTNAG 1 cut(s) 1460
DpnI GATC 9 cut(s) 6, 616, 833, 917, 983, 1095, 1249, 1323, 1377
DpnII GATC 9 cut(s) 4, 614, 831, 915, 981, 1093, 1247, 1321, 1375
EaeI YGGCCR 4 cut(s) 298, 379, 842, 1311
Eco130I CCWWGG 1 cut(s) 941
Eco24I GRGCYC 1 cut(s) 851
Eco47I GGWCC 2 cut(s) 719, 1361
Eco57I CTGAAG 1 cut(s) 245
Eco81I CCTNAGG 1 cut(s) 1460
Eco88I CYCGRG 2 cut(s) 438, 1357
Eco91I GGTNACC 1 cut(s) 625
EcoO65I GGTNACC 1 cut(s) 625
EcoRII CCWGG 2 cut(s) 574, 721
EcoT14I CCWWGG 1 cut(s) 941
EcoT22I ATGCAT 1 cut(s) 163
EcoT38I GRGCYC 1 cut(s) 851
ErhI CCWWGG 1 cut(s) 941
Esp3I CGTCTC 1 cut(s) 651
FaeI CATG 5 cut(s) 165, 560, 898, 945, 1487
FaqI GGGAC 2 cut(s) 697, 1374
FatI CATG 5 cut(s) 161, 556, 894, 941, 1483
FbaI TGATCA 1 cut(s) 1321
Fnu4HI GCNGC 3 cut(s) 382, 745, 1454
FriOI GRGCYC 1 cut(s) 851
Fsp4HI GCNGC 3 cut(s) 382, 745, 1454
FspAI RTGCGCAY 1 cut(s) 166
FspBI CTAG 1 cut(s) 93
FspI TGCGCA 1 cut(s) 166
GlaI GCGC 1 cut(s) 166
GluI GCNGC 3 cut(s) 382, 745, 1454
GsuI CTGGAG 4 cut(s) 270, 597, 1075, 1218
HaeIII GGCC 5 cut(s) 300, 381, 726, 844, 1313
HapII CCGG 9 cut(s) 297, 314, 654, 773, 845, 1086, 1107, 1202, 1310
HhaI GCGC 1 cut(s) 167
Hin1I GRCGYC 1 cut(s) 1352
Hin1II CATG 5 cut(s) 165, 560, 898, 945, 1487
Hin6I GCGC 1 cut(s) 165
HinP1I GCGC 1 cut(s) 165
HincII GTYRAC 2 cut(s) 469, 589
HindII GTYRAC 2 cut(s) 469, 589
HinfI GANTC 2 cut(s) 964, 1389
HpaII CCGG 9 cut(s) 297, 314, 654, 773, 845, 1086, 1107, 1202, 1310
HphI GGTGA 4 cut(s) 303, 619, 689, 910
Hpy166II GTNNAC 7 cut(s) 57, 469, 589, 1020, 1039, 1104, 1130
Hpy188I TCNGA 6 cut(s) 9, 650, 752, 871, 1252, 1302
Hpy188III TCNNGA 7 cut(s) 25, 287, 793, 835, 1000, 1235, 1359
Hpy8I GTNNAC 7 cut(s) 57, 469, 589, 1020, 1039, 1104, 1130
Hpy99I CGWCG 3 cut(s) 89, 635, 1341
HpyAV CCTTC 2 cut(s) 263, 978
HpyCH4III ACNGT 6 cut(s) 413, 584, 599, 631, 1264, 1288
HpyF10VI GCNNNNNNNGC 5 cut(s) 723, 744, 993, 1065, 1160
HpyF3I CTNAG 1 cut(s) 1460
Hsp92I GRCGYC 1 cut(s) 1352
Hsp92II CATG 5 cut(s) 165, 560, 898, 945, 1487
HspAI GCGC 1 cut(s) 165
KpnI GGTACC 1 cut(s) 340
KroI GCCGGC 2 cut(s) 1201, 1309
KroNI GCCGGC 2 cut(s) 1203, 1311
Ksp22I TGATCA 1 cut(s) 1321
KspI CCGCGG 1 cut(s) 385
Kzo9I GATC 9 cut(s) 4, 614, 831, 915, 981, 1093, 1247, 1321, 1375
LmnI GCTCC 8 cut(s) 221, 253, 289, 386, 1056, 1142, 1408, 1461
Lsp1109I GCAGC 2 cut(s) 756, 1465
LweI GCATC 4 cut(s) 148, 176, 654, 1214
MaeI CTAG 1 cut(s) 93
MalI GATC 9 cut(s) 6, 616, 833, 917, 983, 1095, 1249, 1323, 1377
MbiI CCGCTC 1 cut(s) 1403
MboI GATC 9 cut(s) 4, 614, 831, 915, 981, 1093, 1247, 1321, 1375
MboII GAAGA 4 cut(s) 70, 73, 302, 973
MhlI GDGCHC 4 cut(s) 391, 759, 851, 1016
MluCI AATT 5 cut(s) 11, 186, 225, 698, 1239
MlyI GAGTC 1 cut(s) 1398
MmeI TCCRAC 1 cut(s) 577
MnlI CCTC 8 cut(s) 82, 746, 758, 877, 1216, 1366, 1408, 1434
Mph1103I ATGCAT 1 cut(s) 163
MroNI GCCGGC 2 cut(s) 1201, 1309
MseI TTAA 5 cut(s) 215, 342, 978, 1008, 1385
MslI CAYNNNNRTG 2 cut(s) 172, 762
MspA1I CMGCKG 1 cut(s) 384
MspI CCGG 9 cut(s) 297, 314, 654, 773, 845, 1086, 1107, 1202, 1310
MspR9I CCNGG 3 cut(s) 576, 723, 846
Mva1269I GAATGC 1 cut(s) 151
MvaI CCWGG 2 cut(s) 576, 723
MvnI CGCG 2 cut(s) 384, 762
MwoI GCNNNNNNNGC 5 cut(s) 723, 744, 993, 1065, 1160
NaeI GCCGGC 2 cut(s) 1203, 1311
NciI CCSGG 1 cut(s) 846
NcoI CCATGG 1 cut(s) 941
NdeII GATC 9 cut(s) 4, 614, 831, 915, 981, 1093, 1247, 1321, 1375
NgoMIV GCCGGC 2 cut(s) 1201, 1309
NlaIII CATG 5 cut(s) 165, 560, 898, 945, 1487
NlaIV GGNNCC 7 cut(s) 205, 249, 285, 338, 652, 758, 1362
NmuCI GTSAC 5 cut(s) 88, 304, 625, 1168, 1390
NsbI TGCGCA 1 cut(s) 166
NsiI ATGCAT 1 cut(s) 163
NspI RCATGY 2 cut(s) 165, 560
PaeI GCATGC 1 cut(s) 165
PcsI WCGNNNNNNNCGW 1 cut(s) 1333
PctI GAATGC 1 cut(s) 151
PdiI GCCGGC 2 cut(s) 1203, 1311
PfeI GAWTC 1 cut(s) 964
PflFI GACNNNGTC 3 cut(s) 464, 584, 1264
PinAI ACCGGT 1 cut(s) 772
PkrI GCNGC 3 cut(s) 383, 746, 1455
PleI GAGTC 1 cut(s) 1397
PpsI GAGTC 1 cut(s) 1397
Ppu21I YACGTR 1 cut(s) 1101
Psp1406I AACGTT 1 cut(s) 525
Psp6I CCWGG 2 cut(s) 574, 721
PspEI GGTNACC 1 cut(s) 625
PspGI CCWGG 2 cut(s) 574, 721
PspN4I GGNNCC 7 cut(s) 205, 249, 285, 338, 652, 758, 1362
PspPI GGNCC 2 cut(s) 719, 1361
PstNI CAGNNNCTG 1 cut(s) 575
PsyI GACNNNGTC 3 cut(s) 464, 584, 1264
RsaI GTAC 5 cut(s) 184, 338, 935, 1103, 1420
RsaNI GTAC 5 cut(s) 183, 337, 934, 1102, 1419
RseI CAYNNNNRTG 2 cut(s) 172, 762
SacII CCGCGG 1 cut(s) 385
SaqAI TTAA 5 cut(s) 215, 342, 978, 1008, 1385
SatI GCNGC 3 cut(s) 382, 745, 1454
Sau3AI GATC 9 cut(s) 4, 614, 831, 915, 981, 1093, 1247, 1321, 1375
Sau96I GGNCC 2 cut(s) 719, 1361
ScaI AGTACT 2 cut(s) 935, 1420
SchI GAGTC 1 cut(s) 1398
ScrFI CCNGG 3 cut(s) 576, 723, 846
SduI GDGCHC 4 cut(s) 391, 759, 851, 1016
SfaNI GCATC 4 cut(s) 148, 176, 654, 1214
Sfr303I CCGCGG 1 cut(s) 385
SgrBI CCGCGG 1 cut(s) 385
SinI GGWCC 2 cut(s) 719, 1361
SmiMI CAYNNNNRTG 2 cut(s) 172, 762
SpeI ACTAGT 1 cut(s) 92
SphI GCATGC 1 cut(s) 165
Sse9I AATT 5 cut(s) 11, 186, 225, 698, 1239
SsiI CCGC 6 cut(s) 382, 384, 717, 760, 1028, 1401
SspI AATATT 1 cut(s) 544
SspMI CTAG 1 cut(s) 93
StyD4I CCNGG 3 cut(s) 574, 721, 844
StyI CCWWGG 1 cut(s) 941
TaaI ACNGT 6 cut(s) 413, 584, 599, 631, 1264, 1288
TaqI TCGA 3 cut(s) 84, 459, 1268
TasI AATT 5 cut(s) 11, 186, 225, 698, 1239
TatI WGTACW 3 cut(s) 182, 933, 1418
TauI GCSGC 1 cut(s) 384
TfiI GAWTC 1 cut(s) 964
Tru1I TTAA 5 cut(s) 215, 342, 978, 1008, 1385
Tru9I TTAA 5 cut(s) 215, 342, 978, 1008, 1385
TscAI CASTG 1 cut(s) 589
TseFI GTSAC 5 cut(s) 88, 304, 625, 1168, 1390
TseI GCWGC 2 cut(s) 744, 1453
Tsp45I GTSAC 5 cut(s) 88, 304, 625, 1168, 1390
TspDTI ATGAA 3 cut(s) 32, 56, 780
TspGWI ACGGA 1 cut(s) 225
TspRI CASTG 1 cut(s) 589
Tth111I GACNNNGTC 3 cut(s) 464, 584, 1264
VpaK11BI GGWCC 2 cut(s) 719, 1361
XapI RAATTY 1 cut(s) 698
XceI RCATGY 2 cut(s) 165, 560
XcmI CCANNNNNNNNNTGG 1 cut(s) 1147
XspI CTAG 1 cut(s) 93
ZraI GACGTC 1 cut(s) 1353
ZrmI AGTACT 2 cut(s) 935, 1420
Zsp2I ATGCAT 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.