AT3G07840

Contains the following InterPro domains Pectin lyase fold virulence factor (InterPro IPR011050), Pectin lyase fold (InterPro IPR012334), Glycoside hydrolase, family 28 (InterPro IPR000743), Parallel beta-helix repeat (InterPro IPR006626)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000434
Physical Location & Seq
Reverse (-)
2501893 .. 2503565
1673 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G07840.1

Sequence Viewer

Length: 1206 bp
ATGGGTTCATATTTAGGAATTTCTGCAGTTCTTTTCGTAATATCTTTGCTGGGATTTTCAGCCAATGCTGAGGTGTTCAACGTTGGTGGTTCTCCAGGTTCTGATATTACTCAGGCACTTCTGAAAGCATTCACATCAGCATGCCAAGCTCCGACAGCGAGCAAGGTGGTGATCACAAAGGGTGAGTTCAAGCTTGGTGAGATCGAGATGACGGGCCCATGCAAAGCTCCAGTCGAGATCAACCTCCAAGGTACTCTCAAAGCTGATGGAAAAGCTATCCAGGGGAAGGAAAGATGGGTCGTCTTCCTAAGAATTAATGGCTTTAAGTTAAACGGAGGTGGAATCTTCGACGGTGAAGGCAATGCAGCTTGGAGAGTCAATAACTGTCACAAGACTTTCGAGTGCAAGAAACTTCCCATCAGTATAAGGTTTGATTTCGTGGAGAATGCTGAGATTAGAGACATATCCTCGATAGATGCTAAGAACTTCCACATAAACGTTCTCGGCGCCAAGAACATGACCTTTGATAACGTCAAGGTCATCGCTCCGGCAGAGAGCCCCAACACTGACGGTATCCATTTGGGAAGAAGTGAAGGAGTCAAGATCCTCAACTCTAAGATAGCCACCGGAGATGACTGCATCTCTGTTGGGGATGGGATGAAGAACCTCCACGTCGAGAACGTTATGTGCGGTCCTGGACACGGAATCAGTGTCGGGAGTCTTGGAAGGTACGTGCATGAGCAAGATGTCACAGGCATTACTGTCGTGAACTGCACCCTTCAGGGAACTGACAATGGGCTAAGGATCAAGACATGGCCATCTGCGGCTTGCGCCACCACCGCCTCTGGTATTCATTTTGAGAACATCATCCTTAACAACGTTAGCAACCCAATCCTCATTGACCAGGAGTACTGCCCTTGGAACCAGTGCAACAAGCAGAAACCATCGACGATTAAGCTGGTGGACATAAGCTTCAAGAATATTAGAGGAACATCAGGGAACAAGGACGCAGTGAAGCTATTGTGCAGCAAGGCGCATCCATGTGCGAATGTTGAGATTGGAAACATTAACCTTGAGTACAAGGGAGCCGATGGTCCACCGACTTTCATGTGCTCAAACGTTTCCCCTAAGCTTGTGGGAACTCAGAACCCGAAGGCTTGTAGCGCCGGACCCACTCCCAAGACAGCTGCTAAGGGAGACTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

401

Amino Acids

42.59

Weight (kDa)

8.31

Isoelectric Point (pI)

29.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_28 PF00295 48 - 375 5.1e-117 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000434)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07820 AT3G07830 AT3G07840 AT5G48140
fragaria_vesca FvH4_1g26811 FvH4_2g02350 FvH4_6g41380 FvH4_6g41380 FvH4_6g41380 FvH4_6g41430 FvH4_6g41740 FvH4_6g43060 FvH4_7g02910
malus_domestica MD00G1117700.v1.1 MD00G1117800.v1.1 MD00G1117900.v1.1 MD09G1120000.v1.1 MD09G1120100.v1.1 MD09G1120200.v1.1 MD09G1120300.v1.1 MD12G1142000.v1.1 MD13G1218300.v1.1 MD13G1220100.v1.1 MD13G1220200.v1.1 MD16G1223300.v1.1 MD16G1223500.v1.1 MD16G1223600.v1.1 MD17G1110800.v1.1
prunus_persica Prupe.1G044900_v2.0.a1 Prupe.1G045000_v2.0.a1 Prupe.1G167700_v2.0.a1 Prupe.2G005600_v2.0.a1 Prupe.2G005700_v2.0.a1 Prupe.2G008600_v2.0.a1 Prupe.2G009200_v2.0.a1 Prupe.2G009300_v2.0.a1 Prupe.2G009400_v2.0.a1 Prupe.3G109100_v2.0.a1 Prupe.3G109200_v2.0.a1 Prupe.3G109400_v2.0.a1 Prupe.3G109500_v2.0.a1 Prupe.3G109700_v2.0.a1 Prupe.3G203300_v2.0.a1 Prupe.3G203600_v2.0.a1 Prupe.3G203900_v2.0.a1 Prupe.3G204000_v2.0.a1 Prupe.3G204100_v2.0.a1 Prupe.3G204200_v2.0.a1
pyrus_communis pycom09g04480 pycom09g04490 pycom09g04500 pycom12g13680
rosa_chinensis RchiOBHm_Chr1g0323871 RchiOBHm_Chr2g0156921 RchiOBHm_Chr2g0159061 RchiOBHm_Chr6g0246271 RchiOBHm_Chr6g0246281
rosa_laevigata RLG00000015266 RLG00000020954 RLG00000021134 RLG00000030246 RLG00000030250 RLG00000030295
rosa_multiflora Rmu_co8098394.1_g000001 Rmu_co8404671.1_g000001 Rmu_sc0000507.1_g000021 Rmu_sc0001066.1_g000011 Rmu_sc0001066.1_g000015 Rmu_sc0009451.1_g000001 Rmu_ssc0000408.1_g000005
rosa_roxburghii Rroxscaffold_2G00090810 Rroxscaffold_2G00092580 Rroxscaffold_4G00326280 Rroxscaffold_7G00214720
rosa_rugosa Rorug01G0040400 Rorug02G0457200 Rorug05G0520000
rosa_samantha Rh1AG057700 Rh1BG048800 Rh1CG059100 Rh1DG063000 Rh2AG522900 Rh2BG536200 Rh2BG553200 Rh2CG507800 Rh2DG545200 Rh6AG034100 Rh6BG029300 Rh6DG028700
rosa_wichuraiana Rw0G023110 Rw1G004930 Rw2G043170 Rw2G044730 Rw6G002760 Rw6G002920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 506
AciI CCGC 3 cut(s) 690, 824, 840
AclI AACGTT 5 cut(s) 81, 498, 681, 879, 1119
AclWI GGATC 2 cut(s) 598, 812
AcoI YGGCCR 1 cut(s) 815
AcsI RAATTY 1 cut(s) 18
AcuI CTGAAG 1 cut(s) 764
AcyI GRCGYC 1 cut(s) 507
AfaI GTAC 4 cut(s) 253, 731, 911, 1079
AfiI CCNNNNNNNGG 2 cut(s) 286, 701
AgsI TTSAA 3 cut(s) 79, 190, 976
AjiI CACGTC 1 cut(s) 673
AjnI CCWGG 4 cut(s) 94, 279, 694, 903
Alw21I GWGCWC 1 cut(s) 1115
Alw26I GTCTC 2 cut(s) 453, 1191
AlwI GGATC 2 cut(s) 598, 812
AlwNI CAGNNNCTG 1 cut(s) 101
AoxI GGCC 2 cut(s) 214, 815
ApaI GGGCCC 1 cut(s) 218
ApeKI GCWGC 3 cut(s) 365, 1026, 1187
ApoI RAATTY 1 cut(s) 18
ArsI GACNNNNNNTTYG 2 cut(s) 216, 248
AseI ATTAAT 1 cut(s) 315
Asp700I GAANNNNTTC 1 cut(s) 128
AspLEI GCGC 4 cut(s) 509, 833, 1036, 1166
AspS9I GGNCC 5 cut(s) 214, 215, 692, 1094, 1169
AsuHPI GGTGA 4 cut(s) 181, 194, 209, 365
AvaII GGWCC 3 cut(s) 692, 1094, 1169
BaeGI GKGCMC 1 cut(s) 218
BalI TGGCCA 1 cut(s) 817
BanI GGYRCC 1 cut(s) 506
BanII GRGCYC 2 cut(s) 218, 560
BbsI GAAGAC 1 cut(s) 295
Bbv12I GWGCWC 1 cut(s) 1115
BbvCI CCTCAGC 1 cut(s) 69
BbvI GCAGC 3 cut(s) 377, 1038, 1174
BccI CCATC 7 cut(s) 260, 288, 425, 647, 826, 952, 1085
BcgI CGANNNNNNTGC 2 cut(s) 745, 779
BciT130I CCWGG 4 cut(s) 96, 281, 696, 905
BciVI GTATCC 1 cut(s) 584
BclI TGATCA 1 cut(s) 171
BcoDI GTCTC 2 cut(s) 453, 1191
BfmI CTRYAG 1 cut(s) 24
BfoI RGCGCY 2 cut(s) 510, 1167
BfuI GTATCC 1 cut(s) 584
BisI GCNGC 4 cut(s) 366, 825, 1027, 1188
BlsI GCNGC 4 cut(s) 367, 826, 1028, 1189
BmcAI AGTACT 1 cut(s) 911
Bme1390I CCNGG 4 cut(s) 96, 281, 696, 905
Bme18I GGWCC 3 cut(s) 692, 1094, 1169
BmgBI CACGTC 1 cut(s) 673
BmgT120I GGNCC 5 cut(s) 214, 215, 692, 1094, 1169
BmiI GGNNCC 5 cut(s) 216, 508, 923, 1087, 1171
BmrFI CCNGG 4 cut(s) 96, 281, 696, 905
BmsI GCATC 3 cut(s) 466, 648, 1045
BpiI GAAGAC 1 cut(s) 295
BpmI CTGGAG 2 cut(s) 78, 213
Bpu10I CCTNAGC 4 cut(s) 69, 800, 1128, 1191
BpuEI CTTGAG 1 cut(s) 1094
BsaAI YACGTR 1 cut(s) 733
BsaHI GRCGYC 1 cut(s) 507
BsaJI CCNNGG 3 cut(s) 247, 280, 917
BsaWI WCCGGW 1 cut(s) 626
Bsc4I CCNNNNNNNGG 2 cut(s) 286, 701
Bse1I ACTGG 2 cut(s) 230, 925
Bse3DI GCAATG 1 cut(s) 367
BseBI CCWGG 4 cut(s) 96, 281, 696, 905
BseDI CCNNGG 3 cut(s) 247, 280, 917
BseGI GGATG 4 cut(s) 658, 663, 867, 1036
BseLI CCNNNNNNNGG 2 cut(s) 286, 701
BseMI GCAATG 1 cut(s) 367
BseMII CTCAG 4 cut(s) 60, 125, 441, 1157
BseNI ACTGG 2 cut(s) 230, 925
BseSI GKGCMC 1 cut(s) 218
BseXI GCAGC 3 cut(s) 377, 1038, 1174
BseYI CCCAGC 1 cut(s) 49
BsgI GTGCAG 2 cut(s) 757, 1045
BshFI GGCC 2 cut(s) 216, 817
BshNI GGYRCC 1 cut(s) 506
BsiHKAI GWGCWC 1 cut(s) 1115
BsiSI CCGG 3 cut(s) 548, 627, 1167
BslI CCNNNNNNNGG 2 cut(s) 286, 701
BsmAI GTCTC 2 cut(s) 453, 1191
BsmI GAATGC 2 cut(s) 128, 451
BsnI GGCC 2 cut(s) 216, 817
Bsp120I GGGCCC 1 cut(s) 214
Bsp1286I GDGCHC 3 cut(s) 218, 560, 1115
Bsp143I GATC 5 cut(s) 171, 201, 237, 603, 804
BspACI CCGC 3 cut(s) 690, 824, 840
BspANI GGCC 2 cut(s) 216, 817
BspCNI CTCAG 4 cut(s) 61, 124, 442, 1156
BspLI GGNNCC 5 cut(s) 216, 508, 923, 1087, 1171
BspMAI CTGCAG 1 cut(s) 28
BspPI GGATC 2 cut(s) 598, 812
BspT107I GGYRCC 1 cut(s) 506
BsrDI GCAATG 1 cut(s) 367
BsrI ACTGG 2 cut(s) 230, 925
BssECI CCNNGG 3 cut(s) 247, 280, 917
BssMI GATC 5 cut(s) 171, 201, 237, 603, 804
BssNI GRCGYC 1 cut(s) 507
BssT1I CCWWGG 2 cut(s) 247, 917
Bst2UI CCWGG 4 cut(s) 96, 281, 696, 905
Bst4CI ACNGT 4 cut(s) 353, 386, 572, 763
BstACI GRCGYC 1 cut(s) 507
BstBAI YACGTR 1 cut(s) 733
BstC8I GCNNGC 3 cut(s) 142, 160, 829
BstF5I GGATG 4 cut(s) 658, 663, 867, 1036
BstH2I RGCGCY 2 cut(s) 510, 1167
BstHHI GCGC 4 cut(s) 509, 833, 1036, 1166
BstKTI GATC 5 cut(s) 174, 204, 240, 606, 807
BstMAI GTCTC 2 cut(s) 453, 1191
BstMBI GATC 5 cut(s) 171, 201, 237, 603, 804
BstMWI GCNNNNNNNGC 5 cut(s) 146, 155, 830, 839, 1163
BstNI CCWGG 4 cut(s) 96, 281, 696, 905
BstNSI RCATGY 1 cut(s) 144
BstSCI CCNGG 4 cut(s) 94, 279, 694, 903
BstSFI CTRYAG 1 cut(s) 24
BstSLI GKGCMC 1 cut(s) 218
BstV1I GCAGC 3 cut(s) 377, 1038, 1174
BstV2I GAAGAC 1 cut(s) 295
BstX2I RGATCY 1 cut(s) 603
BstYI RGATCY 1 cut(s) 603
BsuI GTATCC 1 cut(s) 584
BsuRI GGCC 2 cut(s) 216, 817
BtgZI GCGATG 1 cut(s) 526
BtrI CACGTC 1 cut(s) 673
BtsCI GGATG 4 cut(s) 658, 663, 867, 1036
BtsI GCAGTG 1 cut(s) 1017
BtsIMutI CAGTG 4 cut(s) 564, 715, 932, 1017
Cac8I GCNNGC 3 cut(s) 142, 160, 829
CaiI CAGNNNCTG 1 cut(s) 101
CfoI GCGC 4 cut(s) 509, 833, 1036, 1166
Cfr13I GGNCC 5 cut(s) 214, 215, 692, 1094, 1169
CseI GACGC 1 cut(s) 1016
Csp6I GTAC 4 cut(s) 252, 730, 910, 1078
CspCI CAANNNNNGTGG 2 cut(s) 67, 102
CviAII CATG 7 cut(s) 141, 219, 517, 737, 813, 1041, 1108
CviQI GTAC 4 cut(s) 252, 730, 910, 1078
DinI GGCGCC 1 cut(s) 508
DpnI GATC 5 cut(s) 173, 203, 239, 605, 806
DpnII GATC 5 cut(s) 171, 201, 237, 603, 804
EaeI YGGCCR 1 cut(s) 815
Eco130I CCWWGG 2 cut(s) 247, 917
Eco24I GRGCYC 2 cut(s) 218, 560
Eco47I GGWCC 3 cut(s) 692, 1094, 1169
Eco57I CTGAAG 1 cut(s) 764
EcoRII CCWGG 4 cut(s) 94, 279, 694, 903
EcoT14I CCWWGG 2 cut(s) 247, 917
EcoT38I GRGCYC 2 cut(s) 218, 560
EgeI GGCGCC 1 cut(s) 508
EheI GGCGCC 1 cut(s) 508
ErhI CCWWGG 2 cut(s) 247, 917
FaeI CATG 7 cut(s) 144, 222, 520, 740, 816, 1044, 1111
FalI AAGNNNNNCTT 1 cut(s) 1184
FatI CATG 7 cut(s) 140, 218, 516, 736, 812, 1040, 1107
FbaI TGATCA 1 cut(s) 171
Fnu4HI GCNGC 4 cut(s) 366, 825, 1027, 1188
FokI GGATG 4 cut(s) 665, 670, 854, 1023
FriOI GRGCYC 2 cut(s) 218, 560
Fsp4HI GCNGC 4 cut(s) 366, 825, 1027, 1188
GlaI GCGC 4 cut(s) 508, 832, 1035, 1165
GluI GCNGC 4 cut(s) 366, 825, 1027, 1188
GsaI CCCAGC 1 cut(s) 53
GsuI CTGGAG 2 cut(s) 78, 213
HaeII RGCGCY 2 cut(s) 510, 1167
HaeIII GGCC 2 cut(s) 216, 817
HapII CCGG 3 cut(s) 548, 627, 1167
HgaI GACGC 1 cut(s) 1016
HhaI GCGC 4 cut(s) 509, 833, 1036, 1166
Hin1I GRCGYC 1 cut(s) 507
Hin1II CATG 7 cut(s) 144, 222, 520, 740, 816, 1044, 1111
Hin6I GCGC 4 cut(s) 507, 831, 1034, 1164
HinP1I GCGC 4 cut(s) 507, 831, 1034, 1164
HindIII AAGCTT 3 cut(s) 191, 970, 1130
HinfI GANTC 5 cut(s) 342, 375, 597, 705, 718
HpaII CCGG 3 cut(s) 548, 627, 1167
HphI GGTGA 4 cut(s) 181, 194, 209, 365
Hpy166II GTNNAC 3 cut(s) 769, 964, 1097
Hpy188I TCNGA 4 cut(s) 103, 123, 153, 1146
Hpy188III TCNNGA 8 cut(s) 205, 235, 601, 676, 715, 766, 808, 976
Hpy8I GTNNAC 3 cut(s) 769, 964, 1097
Hpy99I CGWCG 3 cut(s) 353, 677, 952
HpyAV CCTTC 6 cut(s) 280, 350, 587, 720, 788, 1147
HpyCH4III ACNGT 4 cut(s) 353, 386, 572, 763
HpyCH4IV ACGT 8 cut(s) 81, 498, 531, 672, 681, 732, 879, 1119
HpyCH4V TGCA 9 cut(s) 26, 222, 365, 405, 639, 736, 774, 930, 1026
HpyF10VI GCNNNNNNNGC 5 cut(s) 146, 155, 830, 839, 1163
HpySE526I ACGT 8 cut(s) 81, 498, 531, 672, 681, 732, 879, 1119
Hsp92I GRCGYC 1 cut(s) 507
Hsp92II CATG 7 cut(s) 144, 222, 520, 740, 816, 1044, 1111
HspAI GCGC 4 cut(s) 507, 831, 1034, 1164
KasI GGCGCC 1 cut(s) 506
Ksp22I TGATCA 1 cut(s) 171
Kzo9I GATC 5 cut(s) 171, 201, 237, 603, 804
LmnI GCTCC 4 cut(s) 154, 232, 550, 1085
Lsp1109I GCAGC 3 cut(s) 377, 1038, 1174
LweI GCATC 3 cut(s) 466, 648, 1045
MaeII ACGT 8 cut(s) 81, 498, 531, 672, 681, 732, 879, 1119
MaeIII GTNAC 2 cut(s) 386, 748
MalI GATC 5 cut(s) 173, 203, 239, 605, 806
MboI GATC 5 cut(s) 171, 201, 237, 603, 804
MboII GAAGA 4 cut(s) 295, 337, 597, 673
MflI RGATCY 1 cut(s) 603
MhlI GDGCHC 3 cut(s) 218, 560, 1115
MlsI TGGCCA 1 cut(s) 817
MluCI AATT 2 cut(s) 18, 312
MluNI TGGCCA 1 cut(s) 817
Mly113I GGCGCC 1 cut(s) 507
MlyI GAGTC 3 cut(s) 384, 606, 727
MmeI TCCRAC 1 cut(s) 176
MnlI CCTC 9 cut(s) 64, 254, 329, 478, 617, 677, 853, 905, 980
Mox20I TGGCCA 1 cut(s) 817
MroXI GAANNNNTTC 1 cut(s) 128
MscI TGGCCA 1 cut(s) 817
MseI TTAA 6 cut(s) 315, 324, 329, 873, 954, 1068
MslI CAYNNNNRTG 2 cut(s) 139, 1041
Msp20I TGGCCA 1 cut(s) 817
MspA1I CMGCKG 1 cut(s) 1187
MspI CCGG 3 cut(s) 548, 627, 1167
MspR9I CCNGG 4 cut(s) 96, 281, 696, 905
Mva1269I GAATGC 2 cut(s) 128, 451
MvaI CCWGG 4 cut(s) 96, 281, 696, 905
MwoI GCNNNNNNNGC 5 cut(s) 146, 155, 830, 839, 1163
NarI GGCGCC 1 cut(s) 507
NdeII GATC 5 cut(s) 171, 201, 237, 603, 804
NlaIII CATG 7 cut(s) 144, 222, 520, 740, 816, 1044, 1111
NlaIV GGNNCC 5 cut(s) 216, 508, 923, 1087, 1171
NmeAIII GCCGAG 1 cut(s) 483
NmuCI GTSAC 2 cut(s) 386, 748
NspI RCATGY 1 cut(s) 144
PaeI GCATGC 1 cut(s) 144
PcsI WCGNNNNNNNCGW 1 cut(s) 678
PctI GAATGC 2 cut(s) 128, 451
PdmI GAANNNNTTC 1 cut(s) 128
PfeI GAWTC 2 cut(s) 342, 705
PfoI TCCNGGA 1 cut(s) 694
PkrI GCNGC 4 cut(s) 367, 826, 1028, 1189
PleI GAGTC 3 cut(s) 383, 605, 726
PluTI GGCGCC 1 cut(s) 510
PpsI GAGTC 3 cut(s) 383, 605, 726
Ppu21I YACGTR 1 cut(s) 733
PshBI ATTAAT 1 cut(s) 315
Psp1406I AACGTT 5 cut(s) 81, 498, 681, 879, 1119
Psp6I CCWGG 4 cut(s) 94, 279, 694, 903
PspFI CCCAGC 1 cut(s) 49
PspGI CCWGG 4 cut(s) 94, 279, 694, 903
PspN4I GGNNCC 5 cut(s) 216, 508, 923, 1087, 1171
PspOMI GGGCCC 1 cut(s) 214
PspPI GGNCC 5 cut(s) 214, 215, 692, 1094, 1169
PstI CTGCAG 1 cut(s) 28
PstNI CAGNNNCTG 1 cut(s) 101
PsuI RGATCY 1 cut(s) 603
PvuII CAGCTG 1 cut(s) 1187
RsaI GTAC 4 cut(s) 253, 731, 911, 1079
RsaNI GTAC 4 cut(s) 252, 730, 910, 1078
RseI CAYNNNNRTG 2 cut(s) 139, 1041
SaqAI TTAA 6 cut(s) 315, 324, 329, 873, 954, 1068
SatI GCNGC 4 cut(s) 366, 825, 1027, 1188
Sau3AI GATC 5 cut(s) 171, 201, 237, 603, 804
Sau96I GGNCC 5 cut(s) 214, 215, 692, 1094, 1169
ScaI AGTACT 1 cut(s) 911
SchI GAGTC 3 cut(s) 384, 606, 727
ScrFI CCNGG 4 cut(s) 96, 281, 696, 905
SduI GDGCHC 3 cut(s) 218, 560, 1115
SfaNI GCATC 3 cut(s) 466, 648, 1045
SfcI CTRYAG 1 cut(s) 24
SfoI GGCGCC 1 cut(s) 508
SinI GGWCC 3 cut(s) 692, 1094, 1169
SmiMI CAYNNNNRTG 2 cut(s) 139, 1041
SmlI CTYRAG 1 cut(s) 1073
SmoI CTYRAG 1 cut(s) 1073
SphI GCATGC 1 cut(s) 144
Sse9I AATT 2 cut(s) 18, 312
SsiI CCGC 3 cut(s) 690, 824, 840
SspDI GGCGCC 1 cut(s) 506
SspI AATATT 1 cut(s) 982
StyD4I CCNGG 4 cut(s) 94, 279, 694, 903
StyI CCWWGG 2 cut(s) 247, 917
TaaI ACNGT 4 cut(s) 353, 386, 572, 763
TaiI ACGT 8 cut(s) 84, 501, 534, 675, 684, 735, 882, 1122
TaqI TCGA 7 cut(s) 204, 234, 348, 399, 470, 675, 947
TasI AATT 2 cut(s) 18, 312
TatI WGTACW 2 cut(s) 909, 1077
TauI GCSGC 1 cut(s) 827
TfiI GAWTC 2 cut(s) 342, 705
Tru1I TTAA 6 cut(s) 315, 324, 329, 873, 954, 1068
Tru9I TTAA 6 cut(s) 315, 324, 329, 873, 954, 1068
TscAI CASTG 4 cut(s) 571, 715, 932, 1017
TseFI GTSAC 2 cut(s) 386, 748
TseI GCWGC 3 cut(s) 365, 1026, 1187
Tsp45I GTSAC 2 cut(s) 386, 748
TspDTI ATGAA 3 cut(s) 674, 842, 1096
TspGWI ACGGA 2 cut(s) 348, 717
TspRI CASTG 4 cut(s) 571, 715, 932, 1017
VpaK11BI GGWCC 3 cut(s) 692, 1094, 1169
VspI ATTAAT 1 cut(s) 315
XapI RAATTY 1 cut(s) 18
XceI RCATGY 1 cut(s) 144
XmnI GAANNNNTTC 1 cut(s) 128
ZrmI AGTACT 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.