pycom12g13680

Exopolygalacturonase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0000434
Physical Location & Seq
Forward (+)
16155886 .. 16157355
1470 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g13680.1

Sequence Viewer

Length: 1275 bp
ATGCAAAGCAGCTCTATTTCGCATTCTCAAGCAACCTCAATCTCCTGTCGCTCTAACTTAATGGTTGGCTATTGGATATTTGTGTTCTTATTCTTAGCATCTGTTGCTAATGCGAAGGCCGAAGTCTTTTATGTGACAAATTCAACATATGGAGGAAACCCTAGCGGCGATATTACGCTTGCTTTGGCTGATGCTTGGAGAGATGCTTGTTCGTCGCCATGGCCGGCCAAAGTTGTTATTCCAGAAGGGGAATACTACTTAAGGGGAGCAATTTTGCGTGGTCCATGCAAATCTCCCATTGAGGTTCAAGTTCAAGGGTATTTGCGTGCTCCACAAGAAAGCAGCCAACTCCTTCAACAGAATACTTGGATTGGCTTTCAATACGTTGACAGGCTCACCTTATTTGGTGGTGGAACTTTTGATGGCCAAAGTAATTGCCACAAATATAAAAGTTGCCAATCCAACAGAAATTTGAGGTTTGATTTTGTCACAAATTCAGTTATCGAGGGCATAACTTCACTAGACAGCAAAAATTTCCACATCAATGTTTTTGCATGTCGCAATGTTACATTCCAATATGTTACTATCACCGCACCTGGAGACAGCGTCAACACAGATGGAATTCACATTGGGAGATCTTTTGGAGTCACTATTGATCACACAACAATTGGAACAGGTGACGATTGCGTTTCTCTTGGTGACGGTAGCCAGAACATTGTTGTGACCAACGTTACTTGTGGACCAGGGCATGGCATAAGCATCGGGAGCCTAGGAAAGTATCCAAACGAAGAGCCCGTGGTTGGAGTCAGAGTGACGAACTGCACGCTCACTAACACACAAAATGGTGTGAGAATCAAAACATGGCCGGGTTCTCCAACATTTACAACTGCCTCGCATATTCACTTTCAAGATATTAAGATGGTAAATGTTAGTAACCCTATTTCTATAGACCAAGAGTACTGCCCTTACACTTATTGTGGAAAAGATGATCCATCCAAAGTCAAGATAAGCGACATCAGTTTCACCAACATCAAGGGCTCATCTGCAACCCCAGTTGCAGTCAAGCTTATGTGCAGTAGAAAAATACCGTGTGATGGAGTCGGGTTGACTGACGTGGACCTCATGAACATCGGAAGCAAAGGCCCTCTCACCTCTCAATGTGCTTATGTCAAGCCCTACATTACTCGCGTGGCGAATGCTCTTGCTTGTGCTACCTGGTCATATTCTAATAGGCTAAGAAGTGGAAGAAATCTCACTAACCTTCTCACTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

425

Amino Acids

46.04

Weight (kDa)

8.43

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pect-lyase_RHGA_epim PF12708 55 - 254 9.4e-06 Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28 PF00295 70 - 391 2.7e-94 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000434)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07820 AT3G07830 AT3G07840 AT5G48140
fragaria_vesca FvH4_1g26811 FvH4_2g02350 FvH4_6g41380 FvH4_6g41380 FvH4_6g41380 FvH4_6g41430 FvH4_6g41740 FvH4_6g43060 FvH4_7g02910
malus_domestica MD00G1117700.v1.1 MD00G1117800.v1.1 MD00G1117900.v1.1 MD09G1120000.v1.1 MD09G1120100.v1.1 MD09G1120200.v1.1 MD09G1120300.v1.1 MD12G1142000.v1.1 MD13G1218300.v1.1 MD13G1220100.v1.1 MD13G1220200.v1.1 MD16G1223300.v1.1 MD16G1223500.v1.1 MD16G1223600.v1.1 MD17G1110800.v1.1
prunus_persica Prupe.1G044900_v2.0.a1 Prupe.1G045000_v2.0.a1 Prupe.1G167700_v2.0.a1 Prupe.2G005600_v2.0.a1 Prupe.2G005700_v2.0.a1 Prupe.2G008600_v2.0.a1 Prupe.2G009200_v2.0.a1 Prupe.2G009300_v2.0.a1 Prupe.2G009400_v2.0.a1 Prupe.3G109100_v2.0.a1 Prupe.3G109200_v2.0.a1 Prupe.3G109400_v2.0.a1 Prupe.3G109500_v2.0.a1 Prupe.3G109700_v2.0.a1 Prupe.3G203300_v2.0.a1 Prupe.3G203600_v2.0.a1 Prupe.3G203900_v2.0.a1 Prupe.3G204000_v2.0.a1 Prupe.3G204100_v2.0.a1 Prupe.3G204200_v2.0.a1
pyrus_communis pycom09g04480 pycom09g04490 pycom09g04500 pycom12g13680
rosa_chinensis RchiOBHm_Chr1g0323871 RchiOBHm_Chr2g0156921 RchiOBHm_Chr2g0159061 RchiOBHm_Chr6g0246271 RchiOBHm_Chr6g0246281
rosa_laevigata RLG00000015266 RLG00000020954 RLG00000021134 RLG00000030246 RLG00000030250 RLG00000030295
rosa_multiflora Rmu_co8098394.1_g000001 Rmu_co8404671.1_g000001 Rmu_sc0000507.1_g000021 Rmu_sc0001066.1_g000011 Rmu_sc0001066.1_g000015 Rmu_sc0009451.1_g000001 Rmu_ssc0000408.1_g000005
rosa_roxburghii Rroxscaffold_2G00090810 Rroxscaffold_2G00092580 Rroxscaffold_4G00326280 Rroxscaffold_7G00214720
rosa_rugosa Rorug01G0040400 Rorug02G0457200 Rorug05G0520000
rosa_samantha Rh1AG057700 Rh1BG048800 Rh1CG059100 Rh1DG063000 Rh2AG522900 Rh2BG536200 Rh2BG553200 Rh2CG507800 Rh2DG545200 Rh6AG034100 Rh6BG029300 Rh6DG028700
rosa_wichuraiana Rw0G023110 Rw1G004930 Rw2G043170 Rw2G044730 Rw6G002760 Rw6G002920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 749
AccII CGCG 1 cut(s) 1188
AciI CCGC 2 cut(s) 165, 591
AclI AACGTT 1 cut(s) 729
AclWI GGATC 1 cut(s) 983
AcoI YGGCCR 4 cut(s) 221, 225, 424, 863
AcsI RAATTY 5 cut(s) 139, 469, 493, 532, 621
AfaI GTAC 1 cut(s) 959
AfiI CCNNNNNNNGG 3 cut(s) 749, 800, 1094
AflII CTTAAG 1 cut(s) 259
AgsI TTSAA 6 cut(s) 144, 308, 314, 356, 380, 908
AjiI CACGTC 1 cut(s) 1114
AjnI CCWGG 3 cut(s) 595, 742, 1214
AluBI AGCT 2 cut(s) 12, 1066
AluI AGCT 2 cut(s) 12, 1066
Alw21I GWGCWC 1 cut(s) 331
Alw26I GTCTC 1 cut(s) 594
AlwI GGATC 1 cut(s) 983
AoxI GGCC 6 cut(s) 117, 221, 225, 424, 863, 1141
ApeKI GCWGC 2 cut(s) 9, 342
ApoI RAATTY 5 cut(s) 139, 469, 493, 532, 621
AspA2I CCTAGG 1 cut(s) 769
AspS9I GGNCC 4 cut(s) 281, 740, 1117, 1142
AsuC2I CCSGG 1 cut(s) 867
AsuHPI GGTGA 6 cut(s) 388, 580, 689, 710, 1015, 1141
AvaII GGWCC 3 cut(s) 281, 740, 1117
AvrII CCTAGG 1 cut(s) 769
BalI TGGCCA 1 cut(s) 426
BanII GRGCYC 2 cut(s) 795, 1040
Bbv12I GWGCWC 1 cut(s) 331
BbvI GCAGC 2 cut(s) 21, 354
BccI CCATC 5 cut(s) 416, 611, 913, 1000, 1088
BcgI CGANNNNNNTGC 2 cut(s) 742, 776
BciT130I CCWGG 3 cut(s) 597, 744, 1216
BciVI GTATCC 1 cut(s) 789
BclI TGATCA 1 cut(s) 655
BcnI CCSGG 1 cut(s) 867
BcoDI GTCTC 1 cut(s) 594
BfaI CTAG 4 cut(s) 162, 521, 770, 1269
BfmI CTRYAG 1 cut(s) 945
BfrI CTTAAG 1 cut(s) 259
BfuI GTATCC 1 cut(s) 789
BglII AGATCT 1 cut(s) 635
BisI GCNGC 3 cut(s) 10, 166, 343
BlnI CCTAGG 1 cut(s) 769
BlsI GCNGC 3 cut(s) 11, 167, 344
BmcAI AGTACT 1 cut(s) 959
Bme1390I CCNGG 4 cut(s) 597, 744, 867, 1216
Bme18I GGWCC 3 cut(s) 281, 740, 1117
BmgBI CACGTC 1 cut(s) 1114
BmgT120I GGNCC 4 cut(s) 281, 740, 1117, 1142
BmiI GGNNCC 1 cut(s) 767
BmrFI CCNGG 4 cut(s) 597, 744, 867, 1216
BmrI ACTGGG 1 cut(s) 1046
BmsI GCATC 4 cut(s) 107, 181, 193, 768
BmuI ACTGGG 1 cut(s) 1046
BpmI CTGGAG 1 cut(s) 618
BpuEI CTTGAG 1 cut(s) 12
BpuMI CCSGG 1 cut(s) 867
BsaJI CCNNGG 4 cut(s) 218, 743, 769, 795
BsaXI ACNNNNNCTCC 4 cut(s) 591, 621, 795, 825
Bsc4I CCNNNNNNNGG 3 cut(s) 749, 800, 1094
Bse118I RCCGGY 1 cut(s) 223
Bse1I ACTGG 1 cut(s) 1052
Bse3DI GCAATG 1 cut(s) 568
BseBI CCWGG 3 cut(s) 597, 744, 1216
BseDI CCNNGG 4 cut(s) 218, 743, 769, 795
BseGI GGATG 1 cut(s) 992
BseLI CCNNNNNNNGG 3 cut(s) 749, 800, 1094
BseMI GCAATG 1 cut(s) 568
BseNI ACTGG 1 cut(s) 1052
BseXI GCAGC 2 cut(s) 21, 354
BsgI GTGCAG 2 cut(s) 805, 1093
Bsh1236I CGCG 1 cut(s) 1188
BshFI GGCC 6 cut(s) 119, 223, 227, 426, 865, 1143
BsiHKAI GWGCWC 1 cut(s) 331
BsiSI CCGG 2 cut(s) 224, 866
BslI CCNNNNNNNGG 3 cut(s) 749, 800, 1094
BsmAI GTCTC 1 cut(s) 594
BsmI GAATGC 2 cut(s) 22, 1201
BsnI GGCC 6 cut(s) 119, 223, 227, 426, 865, 1143
Bsp1286I GDGCHC 3 cut(s) 331, 795, 1040
Bsp143I GATC 3 cut(s) 635, 655, 988
Bsp19I CCATGG 1 cut(s) 218
BspACI CCGC 2 cut(s) 165, 591
BspANI GGCC 6 cut(s) 119, 223, 227, 426, 865, 1143
BspFNI CGCG 1 cut(s) 1188
BspHI TCATGA 1 cut(s) 1122
BspLI GGNNCC 1 cut(s) 767
BspPI GGATC 1 cut(s) 983
BspQI GCTCTTC 1 cut(s) 783
BspTI CTTAAG 1 cut(s) 259
BsrDI GCAATG 1 cut(s) 568
BsrFI RCCGGY 1 cut(s) 223
BsrI ACTGG 1 cut(s) 1052
BssAI RCCGGY 1 cut(s) 223
BssECI CCNNGG 4 cut(s) 218, 743, 769, 795
BssMI GATC 3 cut(s) 635, 655, 988
BssT1I CCWWGG 2 cut(s) 218, 769
Bst2UI CCWGG 3 cut(s) 597, 744, 1216
Bst4CI ACNGT 2 cut(s) 704, 1089
Bst6I CTCTTC 1 cut(s) 783
BstAFI CTTAAG 1 cut(s) 259
BstAPI GCANNNNNTGC 1 cut(s) 104
BstC8I GCNNGC 4 cut(s) 180, 225, 327, 824
BstDEI CTNAG 2 cut(s) 94, 1235
BstDSI CCRYGG 2 cut(s) 218, 795
BstF5I GGATG 1 cut(s) 992
BstFNI CGCG 1 cut(s) 1188
BstKTI GATC 3 cut(s) 638, 658, 991
BstMAI GTCTC 1 cut(s) 594
BstMBI GATC 3 cut(s) 635, 655, 988
BstMWI GCNNNNNNNGC 2 cut(s) 104, 765
BstNI CCWGG 3 cut(s) 597, 744, 1216
BstNSI RCATGY 1 cut(s) 558
BstSCI CCNGG 4 cut(s) 595, 742, 865, 1214
BstSFI CTRYAG 1 cut(s) 945
BstUI CGCG 1 cut(s) 1188
BstV1I GCAGC 2 cut(s) 21, 354
BstX2I RGATCY 1 cut(s) 635
BstYI RGATCY 1 cut(s) 635
BsuI GTATCC 1 cut(s) 789
BsuRI GGCC 6 cut(s) 119, 223, 227, 426, 865, 1143
BtgI CCRYGG 2 cut(s) 218, 795
BtrI CACGTC 1 cut(s) 1114
BtsCI GGATG 1 cut(s) 992
Cac8I GCNNGC 4 cut(s) 180, 225, 327, 824
CciI TCATGA 1 cut(s) 1122
Cfr10I RCCGGY 1 cut(s) 223
Cfr13I GGNCC 4 cut(s) 281, 740, 1117, 1142
CseI GACGC 1 cut(s) 595
CsiI ACCWGGT 1 cut(s) 1214
Csp6I GTAC 1 cut(s) 958
CviAII CATG 6 cut(s) 219, 285, 555, 749, 861, 1123
CviQI GTAC 1 cut(s) 958
DdeI CTNAG 2 cut(s) 94, 1235
DpnI GATC 3 cut(s) 637, 657, 990
DpnII GATC 3 cut(s) 635, 655, 988
EaeI YGGCCR 4 cut(s) 221, 225, 424, 863
Eam1104I CTCTTC 1 cut(s) 783
EarI CTCTTC 1 cut(s) 783
Eco130I CCWWGG 2 cut(s) 218, 769
Eco24I GRGCYC 2 cut(s) 795, 1040
Eco47I GGWCC 3 cut(s) 281, 740, 1117
EcoO109I RGGNCCY 1 cut(s) 1142
EcoRI GAATTC 1 cut(s) 621
EcoRII CCWGG 3 cut(s) 595, 742, 1214
EcoT14I CCWWGG 2 cut(s) 218, 769
EcoT38I GRGCYC 2 cut(s) 795, 1040
ErhI CCWWGG 2 cut(s) 218, 769
FaeI CATG 6 cut(s) 222, 288, 558, 752, 864, 1126
FatI CATG 6 cut(s) 218, 284, 554, 748, 860, 1122
FauNDI CATATG 1 cut(s) 148
FbaI TGATCA 1 cut(s) 655
Fnu4HI GCNGC 3 cut(s) 10, 166, 343
FokI GGATG 1 cut(s) 979
FriOI GRGCYC 2 cut(s) 795, 1040
FseI GGCCGGCC 1 cut(s) 227
Fsp4HI GCNGC 3 cut(s) 10, 166, 343
FspBI CTAG 4 cut(s) 162, 521, 770, 1269
GluI GCNGC 3 cut(s) 10, 166, 343
GsuI CTGGAG 1 cut(s) 618
HaeIII GGCC 6 cut(s) 119, 223, 227, 426, 865, 1143
HapII CCGG 2 cut(s) 224, 866
HgaI GACGC 1 cut(s) 595
Hin1II CATG 6 cut(s) 222, 288, 558, 752, 864, 1126
HincII GTYRAC 3 cut(s) 388, 610, 1107
HindII GTYRAC 3 cut(s) 388, 610, 1107
HindIII AAGCTT 1 cut(s) 1064
HinfI GANTC 4 cut(s) 645, 804, 852, 1098
HpaII CCGG 2 cut(s) 224, 866
HphI GGTGA 6 cut(s) 388, 580, 689, 710, 1015, 1141
Hpy166II GTNNAC 5 cut(s) 388, 610, 740, 1107, 1117
Hpy188I TCNGA 2 cut(s) 809, 1133
Hpy188III TCNNGA 5 cut(s) 242, 763, 908, 1003, 1123
Hpy8I GTNNAC 5 cut(s) 388, 610, 740, 1107, 1117
Hpy99I CGWCG 1 cut(s) 217
HpyAV CCTTC 4 cut(s) 109, 239, 362, 1271
HpyCH4III ACNGT 2 cut(s) 704, 1089
HpyCH4IV ACGT 3 cut(s) 384, 729, 1113
HpyCH4V TGCA 7 cut(s) 4, 288, 554, 822, 1046, 1058, 1074
HpyF10VI GCNNNNNNNGC 2 cut(s) 104, 765
HpyF3I CTNAG 2 cut(s) 94, 1235
HpySE526I ACGT 3 cut(s) 384, 729, 1113
Hsp92II CATG 6 cut(s) 222, 288, 558, 752, 864, 1126
KroI GCCGGC 1 cut(s) 223
KroNI GCCGGC 1 cut(s) 225
Ksp22I TGATCA 1 cut(s) 655
Kzo9I GATC 3 cut(s) 635, 655, 988
LguI GCTCTTC 1 cut(s) 783
LmnI GCTCC 3 cut(s) 266, 334, 765
Lsp1109I GCAGC 2 cut(s) 21, 354
LweI GCATC 4 cut(s) 107, 181, 193, 768
MabI ACCWGGT 1 cut(s) 1214
MaeI CTAG 4 cut(s) 162, 521, 770, 1269
MaeII ACGT 3 cut(s) 384, 729, 1113
MalI GATC 3 cut(s) 637, 657, 990
MboI GATC 3 cut(s) 635, 655, 988
MboII GAAGA 2 cut(s) 800, 1257
MfeI CAATTG 1 cut(s) 666
MflI RGATCY 1 cut(s) 635
MhlI GDGCHC 3 cut(s) 331, 795, 1040
MlsI TGGCCA 1 cut(s) 426
MluCI AATT 8 cut(s) 139, 270, 433, 469, 493, 532, 621, 666
MluNI TGGCCA 1 cut(s) 426
MlyI GAGTC 3 cut(s) 654, 813, 1107
MmeI TCCRAC 3 cut(s) 486, 781, 899
MnlI CCTC 9 cut(s) 46, 146, 295, 468, 499, 901, 1130, 1155, 1162
Mox20I TGGCCA 1 cut(s) 426
MroNI GCCGGC 1 cut(s) 223
MscI TGGCCA 1 cut(s) 426
MseI TTAA 3 cut(s) 59, 260, 915
MslI CAYNNNNRTG 2 cut(s) 543, 719
Msp20I TGGCCA 1 cut(s) 426
MspCI CTTAAG 1 cut(s) 259
MspI CCGG 2 cut(s) 224, 866
MspR9I CCNGG 4 cut(s) 597, 744, 867, 1216
MunI CAATTG 1 cut(s) 666
Mva1269I GAATGC 2 cut(s) 22, 1201
MvaI CCWGG 3 cut(s) 597, 744, 1216
MvnI CGCG 1 cut(s) 1188
MwoI GCNNNNNNNGC 2 cut(s) 104, 765
NaeI GCCGGC 1 cut(s) 225
NciI CCSGG 1 cut(s) 867
NcoI CCATGG 1 cut(s) 218
NdeI CATATG 1 cut(s) 148
NdeII GATC 3 cut(s) 635, 655, 988
NgoMIV GCCGGC 1 cut(s) 223
NlaIII CATG 6 cut(s) 222, 288, 558, 752, 864, 1126
NlaIV GGNNCC 1 cut(s) 767
NmuCI GTSAC 7 cut(s) 133, 487, 646, 677, 698, 721, 811
NspI RCATGY 1 cut(s) 558
PagI TCATGA 1 cut(s) 1122
PciSI GCTCTTC 1 cut(s) 783
PcsI WCGNNNNNNNCGW 1 cut(s) 792
PctI GAATGC 2 cut(s) 22, 1201
PdiI GCCGGC 1 cut(s) 225
PfeI GAWTC 1 cut(s) 852
PflFI GACNNNGTC 1 cut(s) 605
PflMI CCANNNNNTGG 1 cut(s) 749
PkrI GCNGC 3 cut(s) 11, 167, 344
PleI GAGTC 3 cut(s) 653, 812, 1106
PpsI GAGTC 3 cut(s) 653, 812, 1106
Psp1406I AACGTT 1 cut(s) 729
Psp6I CCWGG 3 cut(s) 595, 742, 1214
PspGI CCWGG 3 cut(s) 595, 742, 1214
PspN4I GGNNCC 1 cut(s) 767
PspPI GGNCC 4 cut(s) 281, 740, 1117, 1142
PsuI RGATCY 1 cut(s) 635
PsyI GACNNNGTC 1 cut(s) 605
RigI GGCCGGCC 1 cut(s) 227
RsaI GTAC 1 cut(s) 959
RsaNI GTAC 1 cut(s) 958
RseI CAYNNNNRTG 2 cut(s) 543, 719
SapI GCTCTTC 1 cut(s) 783
SaqAI TTAA 3 cut(s) 59, 260, 915
SatI GCNGC 3 cut(s) 10, 166, 343
Sau3AI GATC 3 cut(s) 635, 655, 988
Sau96I GGNCC 4 cut(s) 281, 740, 1117, 1142
ScaI AGTACT 1 cut(s) 959
SchI GAGTC 3 cut(s) 654, 813, 1107
ScrFI CCNGG 4 cut(s) 597, 744, 867, 1216
SduI GDGCHC 3 cut(s) 331, 795, 1040
SexAI ACCWGGT 1 cut(s) 1214
SfaNI GCATC 4 cut(s) 107, 181, 193, 768
SfcI CTRYAG 1 cut(s) 945
SinI GGWCC 3 cut(s) 281, 740, 1117
SmiMI CAYNNNNRTG 2 cut(s) 543, 719
SmlI CTYRAG 2 cut(s) 27, 259
SmoI CTYRAG 2 cut(s) 27, 259
Sse9I AATT 8 cut(s) 139, 270, 433, 469, 493, 532, 621, 666
SsiI CCGC 2 cut(s) 165, 591
SspMI CTAG 4 cut(s) 162, 521, 770, 1269
StyD4I CCNGG 4 cut(s) 595, 742, 865, 1214
StyI CCWWGG 2 cut(s) 218, 769
TaaI ACNGT 2 cut(s) 704, 1089
TaiI ACGT 3 cut(s) 387, 732, 1116
TaqI TCGA 1 cut(s) 504
TasI AATT 8 cut(s) 139, 270, 433, 469, 493, 532, 621, 666
TatI WGTACW 1 cut(s) 957
TauI GCSGC 1 cut(s) 168
TfiI GAWTC 1 cut(s) 852
Tru1I TTAA 3 cut(s) 59, 260, 915
Tru9I TTAA 3 cut(s) 59, 260, 915
TseFI GTSAC 7 cut(s) 133, 487, 646, 677, 698, 721, 811
TseI GCWGC 2 cut(s) 9, 342
Tsp45I GTSAC 7 cut(s) 133, 487, 646, 677, 698, 721, 811
TspDTI ATGAA 1 cut(s) 1139
Tth111I GACNNNGTC 1 cut(s) 605
Van91I CCANNNNNTGG 1 cut(s) 749
Vha464I CTTAAG 1 cut(s) 259
VpaK11BI GGWCC 3 cut(s) 281, 740, 1117
XapI RAATTY 5 cut(s) 139, 469, 493, 532, 621
XceI RCATGY 1 cut(s) 558
XmaJI CCTAGG 1 cut(s) 769
XspI CTAG 4 cut(s) 162, 521, 770, 1269
ZrmI AGTACT 1 cut(s) 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.