Rw1G004930

Exopolygalacturonase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000434
Physical Location & Seq
Reverse (-)
9425510 .. 9427248
1739 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G004930.1

Sequence Viewer

Length: 1182 bp
ATGGGTCTCAAACTTGTCATTAACATGTTGTCAATACTTATGGTCTTATCCTCGACATCTGCAGGTAGATCTAGGGACCTTTTAGCTGCTGTTGGCTTTGACGTGACCACTGCAAAATATGCAAATGCATGGAAAGATGCATGTGCATCAACATCAGCAAGTAAAGTTATTGTTCCAAAAGGGACATACAAACTGAAAGAAGCAAGTTTCAAAGGTCCTTGCAAGGCTCCTATTGAGGTTGAGGTCCAAGGTACTTTGCAGGCGCCACCAGACGGCGCCCAACTATCGAAACCAGATACGTGGATCGAGTTTTCATACCTTGACAGGTTCACATTATCGGGTAGTGGAACCTTTGATGGCCAAGGACAAAAAGCTTGGAAAGAAAATGATTGCCACAAAAACCCAAAGTGTTCATCTATTACCGTTAATATGAGGTTCCACGCTGTCAAGAACTCATTAGTCAGGGATGTAACTTCACTTAACAGCAAGAATTTCCACGTGAATGTATTATCGTGCGAGCAACTTACATTCCAACATTTCACCGTCGCTGCACCAGGAGATAGCGTTAATACAGATGGAATACATATTGGGCGCTCAACCGGGGTCAATATTACTGATTCAAAGATTGGTACAGGGGACGATTGCATTTCGATTGGTGATGGCACCAAGCAACTAACTATAACTAAGGTAACTTGTGGACCTGGCCATGGAATAAGCATAGGAAGTCTTGGAAGGTACCCAAAAGAAGAACCTGTGAGTGGAATCCATATTAGGAACTGTACTCTCAGTAATACGTCCAACGGTGTTAGAATCAAGACATGGCCTAATTCCCCAGCAGCTAGCACTGCCTCGGATATTCACTTTGAGGATATCATCATGAATAATGTTGGTAACCCAATCCTCATTGATCAAGAATACTGCCCATGGAATCAGTGTAATAAACAGGCTTCATCAAAAATCAAGATCAGCAATGTGAGCTTCAAGAACATTAGAGGGACGTCTTCCACTCCGGTGGCCGTGAAGATTGCATGCGCCAAGGGCTTACCATGTGACAAGGTGGAAATGACTGACATTAATCTCAAGTACAGTGGAAATCAAGGCTCTATTACATCTCAATGCTCTAATGTGAGGCCCACAATTACTCGAGTCGCAAATACTCTTGCTTGTGCTACCAAGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

393

Amino Acids

42.05

Weight (kDa)

8.98

Isoelectric Point (pI)

31.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_28 PF00295 48 - 377 9.8e-107 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000434)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07820 AT3G07830 AT3G07840 AT5G48140
fragaria_vesca FvH4_1g26811 FvH4_2g02350 FvH4_6g41380 FvH4_6g41380 FvH4_6g41380 FvH4_6g41430 FvH4_6g41740 FvH4_6g43060 FvH4_7g02910
malus_domestica MD00G1117700.v1.1 MD00G1117800.v1.1 MD00G1117900.v1.1 MD09G1120000.v1.1 MD09G1120100.v1.1 MD09G1120200.v1.1 MD09G1120300.v1.1 MD12G1142000.v1.1 MD13G1218300.v1.1 MD13G1220100.v1.1 MD13G1220200.v1.1 MD16G1223300.v1.1 MD16G1223500.v1.1 MD16G1223600.v1.1 MD17G1110800.v1.1
prunus_persica Prupe.1G044900_v2.0.a1 Prupe.1G045000_v2.0.a1 Prupe.1G167700_v2.0.a1 Prupe.2G005600_v2.0.a1 Prupe.2G005700_v2.0.a1 Prupe.2G008600_v2.0.a1 Prupe.2G009200_v2.0.a1 Prupe.2G009300_v2.0.a1 Prupe.2G009400_v2.0.a1 Prupe.3G109100_v2.0.a1 Prupe.3G109200_v2.0.a1 Prupe.3G109400_v2.0.a1 Prupe.3G109500_v2.0.a1 Prupe.3G109700_v2.0.a1 Prupe.3G203300_v2.0.a1 Prupe.3G203600_v2.0.a1 Prupe.3G203900_v2.0.a1 Prupe.3G204000_v2.0.a1 Prupe.3G204100_v2.0.a1 Prupe.3G204200_v2.0.a1
pyrus_communis pycom09g04480 pycom09g04490 pycom09g04500 pycom12g13680
rosa_chinensis RchiOBHm_Chr1g0323871 RchiOBHm_Chr2g0156921 RchiOBHm_Chr2g0159061 RchiOBHm_Chr6g0246271 RchiOBHm_Chr6g0246281
rosa_laevigata RLG00000015266 RLG00000020954 RLG00000021134 RLG00000030246 RLG00000030250 RLG00000030295
rosa_multiflora Rmu_co8098394.1_g000001 Rmu_co8404671.1_g000001 Rmu_sc0000507.1_g000021 Rmu_sc0001066.1_g000011 Rmu_sc0001066.1_g000015 Rmu_sc0009451.1_g000001 Rmu_ssc0000408.1_g000005
rosa_roxburghii Rroxscaffold_2G00090810 Rroxscaffold_2G00092580 Rroxscaffold_4G00326280 Rroxscaffold_7G00214720
rosa_rugosa Rorug01G0040400 Rorug02G0457200 Rorug05G0520000
rosa_samantha Rh1AG057700 Rh1BG048800 Rh1CG059100 Rh1DG063000 Rh2AG522900 Rh2BG536200 Rh2BG553200 Rh2CG507800 Rh2DG545200 Rh6AG034100 Rh6BG029300 Rh6DG028700
rosa_wichuraiana Rw0G023110 Rw1G004930 Rw2G043170 Rw2G044730 Rw6G002760 Rw6G002920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1001
Acc36I ACCTGC 1 cut(s) 53
Acc65I GGTACC 1 cut(s) 735
AccB1I GGYRCC 4 cut(s) 262, 275, 662, 735
AclWI GGATC 1 cut(s) 311
AcoI YGGCCR 3 cut(s) 358, 703, 1014
AcsI RAATTY 1 cut(s) 490
AcvI CACGTG 1 cut(s) 499
AcyI GRCGYC 3 cut(s) 263, 276, 998
AfaI GTAC 5 cut(s) 253, 631, 737, 781, 1085
AfiI CCNNNNNNNGG 3 cut(s) 272, 707, 758
AflIII ACRYGT 1 cut(s) 24
AgsI TTSAA 3 cut(s) 211, 621, 982
AjiI CACGTC 1 cut(s) 103
AjnI CCWGG 2 cut(s) 553, 700
AleI CACNNNNGTG 1 cut(s) 1010
AluBI AGCT 4 cut(s) 86, 374, 839, 978
AluI AGCT 4 cut(s) 86, 374, 839, 978
Alw26I GTCTC 1 cut(s) 11
AlwI GGATC 1 cut(s) 311
Ama87I CYCGRG 1 cut(s) 1143
AoxI GGCC 5 cut(s) 358, 703, 821, 1014, 1130
ApeKI GCWGC 3 cut(s) 86, 548, 836
ApoI RAATTY 1 cut(s) 490
AseI ATTAAT 1 cut(s) 1074
Asp718I GGTACC 1 cut(s) 735
AspLEI GCGC 4 cut(s) 265, 278, 594, 1034
AspS9I GGNCC 5 cut(s) 76, 215, 244, 698, 1131
AsuC2I CCSGG 1 cut(s) 601
AsuHPI GGTGA 2 cut(s) 532, 668
AsuNHI GCTAGC 1 cut(s) 839
AvaI CYCGRG 1 cut(s) 1143
AvaII GGWCC 4 cut(s) 76, 215, 244, 698
BalI TGGCCA 2 cut(s) 360, 705
BanI GGYRCC 4 cut(s) 262, 275, 662, 735
BbrPI CACGTG 1 cut(s) 499
BbsI GAAGAC 1 cut(s) 993
BbvI GCAGC 3 cut(s) 73, 535, 848
BccI CCATC 3 cut(s) 350, 569, 653
BceAI ACGGC 2 cut(s) 289, 1001
BciT130I CCWGG 2 cut(s) 555, 702
BclI TGATCA 1 cut(s) 907
BcnI CCSGG 1 cut(s) 601
BcoDI GTCTC 1 cut(s) 11
BfaI CTAG 2 cut(s) 72, 840
BfmI CTRYAG 1 cut(s) 60
BfoI RGCGCY 3 cut(s) 266, 279, 595
BfuAI ACCTGC 1 cut(s) 53
BglII AGATCT 1 cut(s) 68
BisI GCNGC 3 cut(s) 87, 549, 837
BlsI GCNGC 3 cut(s) 88, 550, 838
Bme1390I CCNGG 3 cut(s) 555, 601, 702
Bme18I GGWCC 4 cut(s) 76, 215, 244, 698
BmeT110I CYCGRG 1 cut(s) 1143
BmgBI CACGTC 1 cut(s) 103
BmgT120I GGNCC 5 cut(s) 76, 215, 244, 698, 1131
BmiI GGNNCC 8 cut(s) 77, 228, 264, 277, 349, 437, 664, 737
BmrFI CCNGG 3 cut(s) 555, 601, 702
BmsI GCATC 2 cut(s) 127, 155
BmtI GCTAGC 1 cut(s) 843
BpiI GAAGAC 1 cut(s) 993
BpuEI CTTGAG 1 cut(s) 1064
BpuMI CCSGG 1 cut(s) 601
BsaAI YACGTR 2 cut(s) 300, 499
BsaHI GRCGYC 3 cut(s) 263, 276, 998
BsaI GGTCTC 1 cut(s) 11
BsaJI CCNNGG 7 cut(s) 247, 361, 600, 706, 849, 923, 1035
BsaWI WCCGGW 1 cut(s) 1009
BsaXI ACNNNNNCTCC 2 cut(s) 549, 579
Bsc4I CCNNNNNNNGG 3 cut(s) 272, 707, 758
Bse3DI GCAATG 1 cut(s) 976
BseBI CCWGG 2 cut(s) 555, 702
BseDI CCNNGG 7 cut(s) 247, 361, 600, 706, 849, 923, 1035
BseGI GGATG 1 cut(s) 472
BseLI CCNNNNNNNGG 3 cut(s) 272, 707, 758
BseMI GCAATG 1 cut(s) 976
BseMII CTCAG 1 cut(s) 799
BseXI GCAGC 3 cut(s) 73, 535, 848
BseYI CCCAGC 1 cut(s) 832
BsgI GTGCAG 1 cut(s) 534
BshFI GGCC 5 cut(s) 360, 705, 823, 1016, 1132
BshNI GGYRCC 4 cut(s) 262, 275, 662, 735
BsiHKCI CYCGRG 1 cut(s) 1143
BsiSI CCGG 2 cut(s) 600, 1010
BslFI GGGAC 4 cut(s) 89, 196, 650, 1009
BslI CCNNNNNNNGG 3 cut(s) 272, 707, 758
BsmAI GTCTC 1 cut(s) 11
BsmFI GGGAC 4 cut(s) 89, 196, 650, 1009
BsnI GGCC 5 cut(s) 360, 705, 823, 1016, 1132
Bso31I GGTCTC 1 cut(s) 11
BsoBI CYCGRG 1 cut(s) 1143
Bsp143I GATC 4 cut(s) 68, 303, 907, 963
Bsp19I CCATGG 2 cut(s) 706, 923
BspANI GGCC 5 cut(s) 360, 705, 823, 1016, 1132
BspCNI CTCAG 1 cut(s) 798
BspHI TCATGA 1 cut(s) 876
BspLI GGNNCC 8 cut(s) 77, 228, 264, 277, 349, 437, 664, 737
BspMAI CTGCAG 1 cut(s) 64
BspMI ACCTGC 1 cut(s) 53
BspOI GCTAGC 1 cut(s) 843
BspPI GGATC 1 cut(s) 311
BspT107I GGYRCC 4 cut(s) 262, 275, 662, 735
BspTNI GGTCTC 1 cut(s) 11
BsrDI GCAATG 1 cut(s) 976
BssECI CCNNGG 7 cut(s) 247, 361, 600, 706, 849, 923, 1035
BssMI GATC 4 cut(s) 68, 303, 907, 963
BssNI GRCGYC 3 cut(s) 263, 276, 998
BssT1I CCWWGG 5 cut(s) 247, 361, 706, 923, 1035
Bst2UI CCWGG 2 cut(s) 555, 702
Bst4CI ACNGT 5 cut(s) 424, 544, 779, 803, 1088
BstACI GRCGYC 3 cut(s) 263, 276, 998
BstAPI GCANNNNNTGC 1 cut(s) 119
BstBAI YACGTR 2 cut(s) 300, 499
BstC8I GCNNGC 4 cut(s) 261, 518, 841, 1030
BstDEI CTNAG 2 cut(s) 684, 785
BstDSI CCRYGG 2 cut(s) 706, 923
BstEII GGTNACC 1 cut(s) 890
BstF5I GGATG 1 cut(s) 472
BstH2I RGCGCY 3 cut(s) 266, 279, 595
BstHHI GCGC 4 cut(s) 265, 278, 594, 1034
BstKTI GATC 4 cut(s) 71, 306, 910, 966
BstMAI GTCTC 1 cut(s) 11
BstMBI GATC 4 cut(s) 68, 303, 907, 963
BstMWI GCNNNNNNNGC 4 cut(s) 119, 845, 975, 1038
BstNI CCWGG 2 cut(s) 555, 702
BstNSI RCATGY 3 cut(s) 28, 144, 1032
BstPI GGTNACC 1 cut(s) 890
BstSCI CCNGG 3 cut(s) 553, 599, 700
BstSFI CTRYAG 1 cut(s) 60
BstV1I GCAGC 3 cut(s) 73, 535, 848
BstV2I GAAGAC 1 cut(s) 993
BstX2I RGATCY 1 cut(s) 68
BstXI CCANNNNNNTGG 2 cut(s) 300, 1012
BstYI RGATCY 1 cut(s) 68
BsuRI GGCC 5 cut(s) 360, 705, 823, 1016, 1132
BtgI CCRYGG 2 cut(s) 706, 923
BtrI CACGTC 1 cut(s) 103
BtsCI GGATG 1 cut(s) 472
BtsI GCAGTG 2 cut(s) 108, 843
BtsIMutI CAGTG 4 cut(s) 108, 843, 938, 1093
BveI ACCTGC 1 cut(s) 53
Cac8I GCNNGC 4 cut(s) 261, 518, 841, 1030
CciI TCATGA 1 cut(s) 876
CfoI GCGC 4 cut(s) 265, 278, 594, 1034
Cfr13I GGNCC 5 cut(s) 76, 215, 244, 698, 1131
Csp6I GTAC 5 cut(s) 252, 630, 736, 780, 1084
CspCI CAANNNNNGTGG 2 cut(s) 1069, 1104
CviAII CATG 9 cut(s) 25, 129, 141, 707, 819, 877, 924, 1029, 1047
CviQI GTAC 5 cut(s) 252, 630, 736, 780, 1084
DdeI CTNAG 2 cut(s) 684, 785
DinI GGCGCC 2 cut(s) 264, 277
DpnI GATC 4 cut(s) 70, 305, 909, 965
DpnII GATC 4 cut(s) 68, 303, 907, 963
EaeI YGGCCR 3 cut(s) 358, 703, 1014
Eco130I CCWWGG 5 cut(s) 247, 361, 706, 923, 1035
Eco31I GGTCTC 1 cut(s) 11
Eco32I GATATC 1 cut(s) 871
Eco47I GGWCC 4 cut(s) 76, 215, 244, 698
Eco72I CACGTG 1 cut(s) 499
Eco88I CYCGRG 1 cut(s) 1143
Eco91I GGTNACC 1 cut(s) 890
EcoO109I RGGNCCY 2 cut(s) 76, 215
EcoO65I GGTNACC 1 cut(s) 890
EcoRII CCWGG 2 cut(s) 553, 700
EcoRV GATATC 1 cut(s) 871
EcoT14I CCWWGG 5 cut(s) 247, 361, 706, 923, 1035
EcoT22I ATGCAT 2 cut(s) 130, 142
EgeI GGCGCC 2 cut(s) 264, 277
EheI GGCGCC 2 cut(s) 264, 277
ErhI CCWWGG 5 cut(s) 247, 361, 706, 923, 1035
FaeI CATG 9 cut(s) 28, 132, 144, 710, 822, 880, 927, 1032, 1050
FaqI GGGAC 4 cut(s) 89, 196, 650, 1009
FatI CATG 9 cut(s) 24, 128, 140, 706, 818, 876, 923, 1028, 1046
FbaI TGATCA 1 cut(s) 907
Fnu4HI GCNGC 3 cut(s) 87, 549, 837
FokI GGATG 1 cut(s) 479
Fsp4HI GCNGC 3 cut(s) 87, 549, 837
FspBI CTAG 2 cut(s) 72, 840
GlaI GCGC 4 cut(s) 264, 277, 593, 1033
GluI GCNGC 3 cut(s) 87, 549, 837
GsaI CCCAGC 1 cut(s) 836
HaeII RGCGCY 3 cut(s) 266, 279, 595
HaeIII GGCC 5 cut(s) 360, 705, 823, 1016, 1132
HapII CCGG 2 cut(s) 600, 1010
HhaI GCGC 4 cut(s) 265, 278, 594, 1034
Hin1I GRCGYC 3 cut(s) 263, 276, 998
Hin1II CATG 9 cut(s) 28, 132, 144, 710, 822, 880, 927, 1032, 1050
Hin6I GCGC 4 cut(s) 263, 276, 592, 1032
HinP1I GCGC 4 cut(s) 263, 276, 592, 1032
HindIII AAGCTT 1 cut(s) 372
HinfI GANTC 5 cut(s) 617, 762, 810, 928, 1146
HpaII CCGG 2 cut(s) 600, 1010
HphI GGTGA 2 cut(s) 532, 668
Hpy166II GTNNAC 2 cut(s) 330, 698
Hpy188I TCNGA 1 cut(s) 853
Hpy188III TCNNGA 7 cut(s) 448, 814, 877, 911, 961, 982, 1179
Hpy8I GTNNAC 2 cut(s) 330, 698
Hpy99I CGWCG 1 cut(s) 548
HpyAV CCTTC 1 cut(s) 726
HpyCH4III ACNGT 5 cut(s) 424, 544, 779, 803, 1088
HpyCH4IV ACGT 5 cut(s) 102, 299, 498, 794, 998
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 845, 975, 1038
HpyF3I CTNAG 2 cut(s) 684, 785
HpySE526I ACGT 5 cut(s) 102, 299, 498, 794, 998
Hsp92I GRCGYC 3 cut(s) 263, 276, 998
Hsp92II CATG 9 cut(s) 28, 132, 144, 710, 822, 880, 927, 1032, 1050
HspAI GCGC 4 cut(s) 263, 276, 592, 1032
KasI GGCGCC 2 cut(s) 262, 275
KpnI GGTACC 1 cut(s) 739
Ksp22I TGATCA 1 cut(s) 907
Kzo9I GATC 4 cut(s) 68, 303, 907, 963
LmnI GCTCC 1 cut(s) 232
Lsp1109I GCAGC 3 cut(s) 73, 535, 848
LweI GCATC 2 cut(s) 127, 155
MaeI CTAG 2 cut(s) 72, 840
MaeII ACGT 5 cut(s) 102, 299, 498, 794, 998
MaeIII GTNAC 5 cut(s) 103, 469, 688, 890, 1049
MalI GATC 4 cut(s) 70, 305, 909, 965
MboI GATC 4 cut(s) 68, 303, 907, 963
MboII GAAGA 3 cut(s) 758, 993, 1033
MflI RGATCY 1 cut(s) 68
MlsI TGGCCA 2 cut(s) 360, 705
MluCI AATT 3 cut(s) 490, 826, 1137
MluNI TGGCCA 2 cut(s) 360, 705
Mly113I GGCGCC 2 cut(s) 263, 276
MlyI GAGTC 1 cut(s) 1155
MmeI TCCRAC 2 cut(s) 556, 822
MnlI CCTC 9 cut(s) 61, 229, 235, 426, 859, 859, 911, 986, 1122
Mox20I TGGCCA 2 cut(s) 360, 705
Mph1103I ATGCAT 2 cut(s) 130, 142
MscI TGGCCA 2 cut(s) 360, 705
MseI TTAA 5 cut(s) 21, 426, 480, 567, 1074
MslI CAYNNNNRTG 4 cut(s) 23, 501, 1010, 1114
Msp20I TGGCCA 2 cut(s) 360, 705
MspI CCGG 2 cut(s) 600, 1010
MspR9I CCNGG 3 cut(s) 555, 601, 702
MvaI CCWGG 2 cut(s) 555, 702
MwoI GCNNNNNNNGC 4 cut(s) 119, 845, 975, 1038
NarI GGCGCC 2 cut(s) 263, 276
NciI CCSGG 1 cut(s) 601
NcoI CCATGG 2 cut(s) 706, 923
NdeII GATC 4 cut(s) 68, 303, 907, 963
NheI GCTAGC 1 cut(s) 839
NlaIII CATG 9 cut(s) 28, 132, 144, 710, 822, 880, 927, 1032, 1050
NlaIV GGNNCC 8 cut(s) 77, 228, 264, 277, 349, 437, 664, 737
NmuCI GTSAC 2 cut(s) 103, 1049
NsiI ATGCAT 2 cut(s) 130, 142
NspI RCATGY 3 cut(s) 28, 144, 1032
OliI CACNNNNGTG 1 cut(s) 1010
PaeI GCATGC 1 cut(s) 1032
PaeR7I CTCGAG 1 cut(s) 1143
PagI TCATGA 1 cut(s) 876
PciI ACATGT 1 cut(s) 24
PfeI GAWTC 4 cut(s) 617, 762, 810, 928
PkrI GCNGC 3 cut(s) 88, 550, 838
PleI GAGTC 1 cut(s) 1154
PluTI GGCGCC 2 cut(s) 266, 279
PmaCI CACGTG 1 cut(s) 499
PmlI CACGTG 1 cut(s) 499
PpsI GAGTC 1 cut(s) 1154
Ppu21I YACGTR 2 cut(s) 300, 499
PpuMI RGGWCCY 2 cut(s) 76, 215
PscI ACATGT 1 cut(s) 24
PshBI ATTAAT 1 cut(s) 1074
Psp5II RGGWCCY 2 cut(s) 76, 215
Psp6I CCWGG 2 cut(s) 553, 700
PspCI CACGTG 1 cut(s) 499
PspEI GGTNACC 1 cut(s) 890
PspFI CCCAGC 1 cut(s) 832
PspGI CCWGG 2 cut(s) 553, 700
PspN4I GGNNCC 8 cut(s) 77, 228, 264, 277, 349, 437, 664, 737
PspPI GGNCC 5 cut(s) 76, 215, 244, 698, 1131
PspPPI RGGWCCY 2 cut(s) 76, 215
PspXI VCTCGAGB 1 cut(s) 1143
PstI CTGCAG 1 cut(s) 64
PsuI RGATCY 1 cut(s) 68
RsaI GTAC 5 cut(s) 253, 631, 737, 781, 1085
RsaNI GTAC 5 cut(s) 252, 630, 736, 780, 1084
RseI CAYNNNNRTG 4 cut(s) 23, 501, 1010, 1114
SaqAI TTAA 5 cut(s) 21, 426, 480, 567, 1074
SatI GCNGC 3 cut(s) 87, 549, 837
Sau3AI GATC 4 cut(s) 68, 303, 907, 963
Sau96I GGNCC 5 cut(s) 76, 215, 244, 698, 1131
SchI GAGTC 1 cut(s) 1155
ScrFI CCNGG 3 cut(s) 555, 601, 702
SfaNI GCATC 2 cut(s) 127, 155
SfcI CTRYAG 1 cut(s) 60
SfoI GGCGCC 2 cut(s) 264, 277
Sfr274I CTCGAG 1 cut(s) 1143
SinI GGWCC 4 cut(s) 76, 215, 244, 698
SlaI CTCGAG 1 cut(s) 1143
SmiMI CAYNNNNRTG 4 cut(s) 23, 501, 1010, 1114
SmlI CTYRAG 2 cut(s) 1079, 1143
SmoI CTYRAG 2 cut(s) 1079, 1143
SphI GCATGC 1 cut(s) 1032
Sse9I AATT 3 cut(s) 490, 826, 1137
SspDI GGCGCC 2 cut(s) 262, 275
SspI AATATT 1 cut(s) 610
SspMI CTAG 2 cut(s) 72, 840
StyD4I CCNGG 3 cut(s) 553, 599, 700
StyI CCWWGG 5 cut(s) 247, 361, 706, 923, 1035
TaaI ACNGT 5 cut(s) 424, 544, 779, 803, 1088
TaiI ACGT 5 cut(s) 105, 302, 501, 797, 1001
TaqI TCGA 5 cut(s) 53, 287, 306, 650, 1144
TasI AATT 3 cut(s) 490, 826, 1137
TatI WGTACW 2 cut(s) 779, 1083
TfiI GAWTC 4 cut(s) 617, 762, 810, 928
Tru1I TTAA 5 cut(s) 21, 426, 480, 567, 1074
Tru9I TTAA 5 cut(s) 21, 426, 480, 567, 1074
TscAI CASTG 4 cut(s) 115, 850, 938, 1093
TseFI GTSAC 2 cut(s) 103, 1049
TseI GCWGC 3 cut(s) 86, 548, 836
Tsp45I GTSAC 2 cut(s) 103, 1049
TspDTI ATGAA 4 cut(s) 303, 402, 893, 939
TspRI CASTG 4 cut(s) 115, 850, 938, 1093
VpaK11BI GGWCC 4 cut(s) 76, 215, 244, 698
VspI ATTAAT 1 cut(s) 1074
XapI RAATTY 1 cut(s) 490
XceI RCATGY 3 cut(s) 28, 144, 1032
XhoI CTCGAG 1 cut(s) 1143
XspI CTAG 2 cut(s) 72, 840
ZraI GACGTC 1 cut(s) 999
Zsp2I ATGCAT 2 cut(s) 130, 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.