Cyclic phosphodiesterase-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 996 |
| Acc36I | ACCTGC | 1 cut(s) | 853 |
| AccI | GTMKAC | 2 cut(s) | 412, 1726 |
| AccII | CGCG | 2 cut(s) | 1718, 1847 |
| AciI | CCGC | 1 cut(s) | 1922 |
| AclI | AACGTT | 1 cut(s) | 178 |
| AclWI | GGATC | 3 cut(s) | 769, 1442, 1516 |
| AcsI | RAATTY | 4 cut(s) | 464, 1544, 1567, 1612 |
| AcuI | CTGAAG | 3 cut(s) | 231, 1263, 1440 |
| AfaI | GTAC | 5 cut(s) | 505, 700, 1170, 1853, 1865 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1505 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 547 |
| AjnI | CCWGG | 1 cut(s) | 113 |
| AleI | CACNNNNGTG | 1 cut(s) | 1626 |
| Alw26I | GTCTC | 5 cut(s) | 1284, 1305, 1431, 1460, 1745 |
| AlwI | GGATC | 3 cut(s) | 769, 1442, 1516 |
| Ama87I | CYCGRG | 1 cut(s) | 1301 |
| AoxI | GGCC | 2 cut(s) | 388, 1475 |
| ApeKI | GCWGC | 1 cut(s) | 680 |
| ApoI | RAATTY | 4 cut(s) | 464, 1544, 1567, 1612 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 375, 1100 |
| AspLEI | GCGC | 1 cut(s) | 80 |
| AspS9I | GGNCC | 3 cut(s) | 850, 1049, 1475 |
| AsuHPI | GGTGA | 8 cut(s) | 308, 448, 524, 551, 1456, 1613, 1644, 1822 |
| AvaI | CYCGRG | 1 cut(s) | 1301 |
| AvaII | GGWCC | 2 cut(s) | 850, 1049 |
| BbvI | GCAGC | 1 cut(s) | 692 |
| BccI | CCATC | 1 cut(s) | 1441 |
| BceAI | ACGGC | 1 cut(s) | 1431 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 57, 91, 950, 984 |
| BciT130I | CCWGG | 1 cut(s) | 115 |
| BclI | TGATCA | 1 cut(s) | 102 |
| BcoDI | GTCTC | 5 cut(s) | 1284, 1305, 1431, 1460, 1745 |
| BfaI | CTAG | 5 cut(s) | 23, 248, 318, 419, 1673 |
| BfmI | CTRYAG | 1 cut(s) | 1782 |
| BfuAI | ACCTGC | 1 cut(s) | 853 |
| BglII | AGATCT | 1 cut(s) | 1550 |
| BisI | GCNGC | 2 cut(s) | 681, 1922 |
| BlpI | GCTNAGC | 1 cut(s) | 126 |
| BlsI | GCNGC | 2 cut(s) | 682, 1923 |
| BmcAI | AGTACT | 1 cut(s) | 700 |
| Bme1390I | CCNGG | 1 cut(s) | 115 |
| Bme18I | GGWCC | 2 cut(s) | 850, 1049 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 547 |
| BmeT110I | CYCGRG | 1 cut(s) | 1301 |
| BmgT120I | GGNCC | 3 cut(s) | 850, 1049, 1475 |
| BmiI | GGNNCC | 1 cut(s) | 449 |
| BmrFI | CCNGG | 1 cut(s) | 115 |
| BmsI | GCATC | 4 cut(s) | 54, 169, 574, 829 |
| BpmI | CTGGAG | 2 cut(s) | 121, 507 |
| Bpu10I | CCTNAGC | 1 cut(s) | 675 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 126 |
| BpuEI | CTTGAG | 1 cut(s) | 1843 |
| BsaAI | YACGTR | 1 cut(s) | 507 |
| BsaBI | GATNNNNATC | 1 cut(s) | 18 |
| BsaI | GGTCTC | 2 cut(s) | 1284, 1460 |
| BsaJI | CCNNGG | 5 cut(s) | 54, 113, 189, 558, 1183 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 34, 64 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1505 |
| Bse1I | ACTGG | 4 cut(s) | 138, 497, 1359, 1690 |
| Bse3DI | GCAATG | 6 cut(s) | 391, 403, 1106, 1126, 1812, 1916 |
| Bse8I | GATNNNNATC | 1 cut(s) | 18 |
| BseBI | CCWGG | 1 cut(s) | 115 |
| BseDI | CCNNGG | 5 cut(s) | 54, 113, 189, 558, 1183 |
| BseGI | GGATG | 6 cut(s) | 568, 652, 844, 1042, 1531, 1810 |
| BseJI | GATNNNNATC | 1 cut(s) | 18 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1505 |
| BseMI | GCAATG | 6 cut(s) | 391, 403, 1106, 1126, 1812, 1916 |
| BseMII | CTCAG | 1 cut(s) | 1444 |
| BseNI | ACTGG | 4 cut(s) | 138, 497, 1359, 1690 |
| BseXI | GCAGC | 1 cut(s) | 692 |
| BseYI | CCCAGC | 1 cut(s) | 451 |
| Bsh1236I | CGCG | 2 cut(s) | 1718, 1847 |
| BshFI | GGCC | 2 cut(s) | 390, 1477 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1301 |
| BslFI | GGGAC | 2 cut(s) | 1161, 1176 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1505 |
| BsmAI | GTCTC | 5 cut(s) | 1284, 1305, 1431, 1460, 1745 |
| BsmFI | GGGAC | 2 cut(s) | 1161, 1176 |
| BsnI | GGCC | 2 cut(s) | 390, 1477 |
| Bso31I | GGTCTC | 2 cut(s) | 1284, 1460 |
| BsoBI | CYCGRG | 1 cut(s) | 1301 |
| Bsp1407I | TGTACA | 1 cut(s) | 1851 |
| Bsp143I | GATC | 8 cut(s) | 102, 717, 774, 928, 1434, 1482, 1508, 1550 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 126 |
| BspACI | CCGC | 1 cut(s) | 1922 |
| BspANI | GGCC | 2 cut(s) | 390, 1477 |
| BspCNI | CTCAG | 1 cut(s) | 1443 |
| BspFNI | CGCG | 2 cut(s) | 1718, 1847 |
| BspHI | TCATGA | 1 cut(s) | 171 |
| BspLI | GGNNCC | 1 cut(s) | 449 |
| BspMI | ACCTGC | 1 cut(s) | 853 |
| BspPI | GGATC | 3 cut(s) | 769, 1442, 1516 |
| BspQI | GCTCTTC | 1 cut(s) | 951 |
| BspTNI | GGTCTC | 2 cut(s) | 1284, 1460 |
| BsrDI | GCAATG | 6 cut(s) | 391, 403, 1106, 1126, 1812, 1916 |
| BsrGI | TGTACA | 1 cut(s) | 1851 |
| BsrI | ACTGG | 4 cut(s) | 138, 497, 1359, 1690 |
| BssECI | CCNNGG | 5 cut(s) | 54, 113, 189, 558, 1183 |
| BssMI | GATC | 8 cut(s) | 102, 717, 774, 928, 1434, 1482, 1508, 1550 |
| BssT1I | CCWWGG | 3 cut(s) | 54, 189, 1183 |
| Bst2UI | CCWGG | 1 cut(s) | 115 |
| Bst4CI | ACNGT | 5 cut(s) | 284, 751, 923, 1271, 1667 |
| Bst6I | CTCTTC | 4 cut(s) | 951, 1303, 1761, 1766 |
| BstAUI | TGTACA | 1 cut(s) | 1851 |
| BstBAI | YACGTR | 1 cut(s) | 507 |
| BstC8I | GCNNGC | 1 cut(s) | 1819 |
| BstDEI | CTNAG | 4 cut(s) | 126, 623, 675, 1430 |
| BstDSI | CCRYGG | 1 cut(s) | 558 |
| BstEII | GGTNACC | 1 cut(s) | 1603 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1503 |
| BstF5I | GGATG | 6 cut(s) | 568, 652, 844, 1042, 1531, 1810 |
| BstFNI | CGCG | 2 cut(s) | 1718, 1847 |
| BstHHI | GCGC | 1 cut(s) | 80 |
| BstKTI | GATC | 8 cut(s) | 105, 720, 777, 931, 1437, 1485, 1511, 1553 |
| BstMAI | GTCTC | 5 cut(s) | 1284, 1305, 1431, 1460, 1745 |
| BstMBI | GATC | 8 cut(s) | 102, 717, 774, 928, 1434, 1482, 1508, 1550 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 680, 799, 1583, 1818, 1844 |
| BstNI | CCWGG | 1 cut(s) | 115 |
| BstPI | GGTNACC | 1 cut(s) | 1603 |
| BstSCI | CCNGG | 1 cut(s) | 113 |
| BstSFI | CTRYAG | 1 cut(s) | 1782 |
| BstUI | CGCG | 2 cut(s) | 1718, 1847 |
| BstV1I | GCAGC | 1 cut(s) | 692 |
| BstX2I | RGATCY | 3 cut(s) | 774, 1508, 1550 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 398, 1721 |
| BstYI | RGATCY | 3 cut(s) | 774, 1508, 1550 |
| BsuRI | GGCC | 2 cut(s) | 390, 1477 |
| BtgI | CCRYGG | 1 cut(s) | 558 |
| BtsCI | GGATG | 6 cut(s) | 568, 652, 844, 1042, 1531, 1810 |
| BtsIMutI | CAGTG | 5 cut(s) | 98, 207, 747, 1327, 1340 |
| BveI | ACCTGC | 1 cut(s) | 853 |
| Cac8I | GCNNGC | 1 cut(s) | 1819 |
| CciI | TCATGA | 1 cut(s) | 171 |
| CfoI | GCGC | 1 cut(s) | 80 |
| Cfr13I | GGNCC | 3 cut(s) | 850, 1049, 1475 |
| Csp6I | GTAC | 5 cut(s) | 504, 699, 1169, 1852, 1864 |
| CviAII | CATG | 5 cut(s) | 37, 172, 809, 910, 1574 |
| CviQI | GTAC | 5 cut(s) | 504, 699, 1169, 1852, 1864 |
| DdeI | CTNAG | 4 cut(s) | 126, 623, 675, 1430 |
| DpnI | GATC | 8 cut(s) | 104, 719, 776, 930, 1436, 1484, 1510, 1552 |
| DpnII | GATC | 8 cut(s) | 102, 717, 774, 928, 1434, 1482, 1508, 1550 |
| DriI | GACNNNNNGTC | 1 cut(s) | 547 |
| Eam1104I | CTCTTC | 4 cut(s) | 951, 1303, 1761, 1766 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 547 |
| EarI | CTCTTC | 4 cut(s) | 951, 1303, 1761, 1766 |
| Eco130I | CCWWGG | 3 cut(s) | 54, 189, 1183 |
| Eco31I | GGTCTC | 2 cut(s) | 1284, 1460 |
| Eco47I | GGWCC | 2 cut(s) | 850, 1049 |
| Eco57I | CTGAAG | 3 cut(s) | 231, 1263, 1440 |
| Eco88I | CYCGRG | 1 cut(s) | 1301 |
| Eco91I | GGTNACC | 1 cut(s) | 1603 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1503 |
| EcoO109I | RGGNCCY | 1 cut(s) | 850 |
| EcoO65I | GGTNACC | 1 cut(s) | 1603 |
| EcoRII | CCWGG | 1 cut(s) | 113 |
| EcoT14I | CCWWGG | 3 cut(s) | 54, 189, 1183 |
| EcoT22I | ATGCAT | 1 cut(s) | 844 |
| ErhI | CCWWGG | 3 cut(s) | 54, 189, 1183 |
| FaeI | CATG | 5 cut(s) | 40, 175, 812, 913, 1577 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 616, 648, 1521, 1553 |
| FaqI | GGGAC | 2 cut(s) | 1161, 1176 |
| FatI | CATG | 5 cut(s) | 36, 171, 808, 909, 1573 |
| FauNDI | CATATG | 1 cut(s) | 381 |
| FbaI | TGATCA | 1 cut(s) | 102 |
| FblI | GTMKAC | 2 cut(s) | 412, 1726 |
| Fnu4HI | GCNGC | 2 cut(s) | 681, 1922 |
| FokI | GGATG | 6 cut(s) | 575, 659, 851, 1049, 1538, 1817 |
| Fsp4HI | GCNGC | 2 cut(s) | 681, 1922 |
| FspBI | CTAG | 5 cut(s) | 23, 248, 318, 419, 1673 |
| GlaI | GCGC | 1 cut(s) | 79 |
| GluI | GCNGC | 2 cut(s) | 681, 1922 |
| GsaI | CCCAGC | 1 cut(s) | 455 |
| GsuI | CTGGAG | 2 cut(s) | 121, 507 |
| HaeIII | GGCC | 2 cut(s) | 390, 1477 |
| HhaI | GCGC | 1 cut(s) | 80 |
| Hin1II | CATG | 5 cut(s) | 40, 175, 812, 913, 1577 |
| Hin6I | GCGC | 1 cut(s) | 78 |
| HinP1I | GCGC | 1 cut(s) | 78 |
| HincII | GTYRAC | 2 cut(s) | 42, 613 |
| HindII | GTYRAC | 2 cut(s) | 42, 613 |
| HindIII | AAGCTT | 1 cut(s) | 470 |
| HinfI | GANTC | 8 cut(s) | 69, 337, 352, 704, 962, 1349, 1710, 1738 |
| HpaI | GTTAAC | 1 cut(s) | 613 |
| HphI | GGTGA | 8 cut(s) | 308, 448, 524, 551, 1456, 1613, 1644, 1822 |
| Hpy166II | GTNNAC | 5 cut(s) | 42, 413, 613, 1267, 1727 |
| Hpy188I | TCNGA | 5 cut(s) | 63, 1053, 1095, 1134, 1240 |
| Hpy8I | GTNNAC | 5 cut(s) | 42, 413, 613, 1267, 1727 |
| HpyAV | CCTTC | 6 cut(s) | 503, 1048, 1374, 1435, 1445, 1922 |
| HpyCH4III | ACNGT | 5 cut(s) | 284, 751, 923, 1271, 1667 |
| HpyCH4IV | ACGT | 3 cut(s) | 178, 506, 1006 |
| HpyCH4V | TGCA | 3 cut(s) | 273, 396, 842 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 680, 799, 1583, 1818, 1844 |
| HpyF3I | CTNAG | 4 cut(s) | 126, 623, 675, 1430 |
| HpySE526I | ACGT | 3 cut(s) | 178, 506, 1006 |
| Hsp92II | CATG | 5 cut(s) | 40, 175, 812, 913, 1577 |
| HspAI | GCGC | 1 cut(s) | 78 |
| Ksp22I | TGATCA | 1 cut(s) | 102 |
| KspAI | GTTAAC | 1 cut(s) | 613 |
| Kzo9I | GATC | 8 cut(s) | 102, 717, 774, 928, 1434, 1482, 1508, 1550 |
| LguI | GCTCTTC | 1 cut(s) | 951 |
| Lsp1109I | GCAGC | 1 cut(s) | 692 |
| LweI | GCATC | 4 cut(s) | 54, 169, 574, 829 |
| MaeI | CTAG | 5 cut(s) | 23, 248, 318, 419, 1673 |
| MaeII | ACGT | 3 cut(s) | 178, 506, 1006 |
| MaeIII | GTNAC | 5 cut(s) | 140, 512, 539, 912, 1603 |
| MalI | GATC | 8 cut(s) | 104, 719, 776, 930, 1436, 1484, 1510, 1552 |
| MboI | GATC | 8 cut(s) | 102, 717, 774, 928, 1434, 1482, 1508, 1550 |
| MflI | RGATCY | 3 cut(s) | 774, 1508, 1550 |
| MlyI | GAGTC | 3 cut(s) | 361, 1343, 1747 |
| MmeI | TCCRAC | 1 cut(s) | 816 |
| Mph1103I | ATGCAT | 1 cut(s) | 844 |
| MroXI | GAANNNNTTC | 2 cut(s) | 375, 1100 |
| MslI | CAYNNNNRTG | 4 cut(s) | 396, 669, 1626, 1719 |
| MspR9I | CCNGG | 1 cut(s) | 115 |
| MvaI | CCWGG | 1 cut(s) | 115 |
| MvnI | CGCG | 2 cut(s) | 1718, 1847 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 680, 799, 1583, 1818, 1844 |
| NdeI | CATATG | 1 cut(s) | 381 |
| NdeII | GATC | 8 cut(s) | 102, 717, 774, 928, 1434, 1482, 1508, 1550 |
| NlaIII | CATG | 5 cut(s) | 40, 175, 812, 913, 1577 |
| NlaIV | GGNNCC | 1 cut(s) | 449 |
| NmuCI | GTSAC | 2 cut(s) | 512, 539 |
| NsiI | ATGCAT | 1 cut(s) | 844 |
| OliI | CACNNNNGTG | 1 cut(s) | 1626 |
| PaeR7I | CTCGAG | 1 cut(s) | 1301 |
| PagI | TCATGA | 1 cut(s) | 171 |
| PciSI | GCTCTTC | 1 cut(s) | 951 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1229 |
| PdmI | GAANNNNTTC | 2 cut(s) | 375, 1100 |
| PfeI | GAWTC | 5 cut(s) | 69, 337, 704, 962, 1710 |
| PkrI | GCNGC | 2 cut(s) | 682, 1923 |
| PleI | GAGTC | 3 cut(s) | 360, 1343, 1746 |
| PpsI | GAGTC | 3 cut(s) | 360, 1343, 1746 |
| Ppu21I | YACGTR | 1 cut(s) | 507 |
| PpuMI | RGGWCCY | 1 cut(s) | 850 |
| PsiI | TTATAA | 1 cut(s) | 996 |
| Psp1406I | AACGTT | 1 cut(s) | 178 |
| Psp5II | RGGWCCY | 1 cut(s) | 850 |
| Psp6I | CCWGG | 1 cut(s) | 113 |
| PspEI | GGTNACC | 1 cut(s) | 1603 |
| PspFI | CCCAGC | 1 cut(s) | 451 |
| PspGI | CCWGG | 1 cut(s) | 113 |
| PspN4I | GGNNCC | 1 cut(s) | 449 |
| PspPI | GGNCC | 3 cut(s) | 850, 1049, 1475 |
| PspPPI | RGGWCCY | 1 cut(s) | 850 |
| PsuI | RGATCY | 3 cut(s) | 774, 1508, 1550 |
| RsaI | GTAC | 5 cut(s) | 505, 700, 1170, 1853, 1865 |
| RsaNI | GTAC | 5 cut(s) | 504, 699, 1169, 1852, 1864 |
| RseI | CAYNNNNRTG | 4 cut(s) | 396, 669, 1626, 1719 |
| SapI | GCTCTTC | 1 cut(s) | 951 |
| SatI | GCNGC | 2 cut(s) | 681, 1922 |
| Sau3AI | GATC | 8 cut(s) | 102, 717, 774, 928, 1434, 1482, 1508, 1550 |
| Sau96I | GGNCC | 3 cut(s) | 850, 1049, 1475 |
| ScaI | AGTACT | 1 cut(s) | 700 |
| SchI | GAGTC | 3 cut(s) | 361, 1343, 1747 |
| ScrFI | CCNGG | 1 cut(s) | 115 |
| SfaNI | GCATC | 4 cut(s) | 54, 169, 574, 829 |
| SfcI | CTRYAG | 1 cut(s) | 1782 |
| Sfr274I | CTCGAG | 1 cut(s) | 1301 |
| SinI | GGWCC | 2 cut(s) | 850, 1049 |
| SlaI | CTCGAG | 1 cut(s) | 1301 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 396, 669, 1626, 1719 |
| SmlI | CTYRAG | 2 cut(s) | 1301, 1822 |
| SmoI | CTYRAG | 2 cut(s) | 1301, 1822 |
| SsiI | CCGC | 1 cut(s) | 1922 |
| SspI | AATATT | 2 cut(s) | 1013, 1886 |
| SspMI | CTAG | 5 cut(s) | 23, 248, 318, 419, 1673 |
| StyD4I | CCNGG | 1 cut(s) | 113 |
| StyI | CCWWGG | 3 cut(s) | 54, 189, 1183 |
| TaaI | ACNGT | 5 cut(s) | 284, 751, 923, 1271, 1667 |
| TaiI | ACGT | 3 cut(s) | 181, 509, 1009 |
| TaqI | TCGA | 6 cut(s) | 324, 931, 949, 1232, 1302, 1485 |
| TatI | WGTACW | 4 cut(s) | 698, 1168, 1851, 1863 |
| TauI | GCSGC | 1 cut(s) | 1924 |
| TfiI | GAWTC | 5 cut(s) | 69, 337, 704, 962, 1710 |
| TscAI | CASTG | 5 cut(s) | 105, 214, 754, 1327, 1347 |
| TseFI | GTSAC | 2 cut(s) | 512, 539 |
| TseI | GCWGC | 1 cut(s) | 680 |
| Tsp45I | GTSAC | 2 cut(s) | 512, 539 |
| TspDTI | ATGAA | 9 cut(s) | 30, 188, 368, 653, 890, 1053, 1205, 1542, 1821 |
| TspGWI | ACGGA | 2 cut(s) | 575, 1538 |
| TspRI | CASTG | 5 cut(s) | 105, 214, 754, 1327, 1347 |
| VpaK11BI | GGWCC | 2 cut(s) | 850, 1049 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1503 |
| XapI | RAATTY | 4 cut(s) | 464, 1544, 1567, 1612 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 504, 531 |
| XhoI | CTCGAG | 1 cut(s) | 1301 |
| XmiI | GTMKAC | 2 cut(s) | 412, 1726 |
| XmnI | GAANNNNTTC | 2 cut(s) | 375, 1100 |
| XspI | CTAG | 5 cut(s) | 23, 248, 318, 419, 1673 |
| ZrmI | AGTACT | 1 cut(s) | 700 |
| Zsp2I | ATGCAT | 1 cut(s) | 844 |