Cyclic phosphodiesterase-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 148 |
| AclWI | GGATC | 1 cut(s) | 129 |
| AcsI | RAATTY | 1 cut(s) | 332 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 150 |
| AgsI | TTSAA | 1 cut(s) | 137 |
| AleI | CACNNNNGTG | 1 cut(s) | 102 |
| AluBI | AGCT | 2 cut(s) | 156, 279 |
| AluI | AGCT | 2 cut(s) | 156, 279 |
| Alw26I | GTCTC | 1 cut(s) | 203 |
| AlwI | GGATC | 1 cut(s) | 129 |
| ApoI | RAATTY | 1 cut(s) | 332 |
| AspS9I | GGNCC | 1 cut(s) | 348 |
| AsuHPI | GGTGA | 1 cut(s) | 89 |
| AvaII | GGWCC | 1 cut(s) | 348 |
| BccI | CCATC | 1 cut(s) | 112 |
| BcoDI | GTCTC | 1 cut(s) | 203 |
| BfaI | CTAG | 1 cut(s) | 276 |
| Bme18I | GGWCC | 1 cut(s) | 348 |
| BmgT120I | GGNCC | 1 cut(s) | 348 |
| BmsI | GCATC | 1 cut(s) | 7 |
| BpmI | CTGGAG | 1 cut(s) | 261 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 234, 264 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 150 |
| Bse1I | ACTGG | 1 cut(s) | 100 |
| BseGI | GGATG | 2 cut(s) | 22, 55 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 150 |
| BseNI | ACTGG | 1 cut(s) | 100 |
| BseRI | GAGGAG | 1 cut(s) | 191 |
| Bsh1285I | CGRYCG | 1 cut(s) | 370 |
| BsiEI | CGRYCG | 1 cut(s) | 370 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 150 |
| BsmAI | GTCTC | 1 cut(s) | 203 |
| Bsp143I | GATC | 2 cut(s) | 70, 121 |
| BspHI | TCATGA | 1 cut(s) | 10 |
| BspPI | GGATC | 1 cut(s) | 129 |
| BsrI | ACTGG | 1 cut(s) | 100 |
| BssMI | GATC | 2 cut(s) | 70, 121 |
| BstDEI | CTNAG | 1 cut(s) | 84 |
| BstF5I | GGATG | 2 cut(s) | 22, 55 |
| BstKTI | GATC | 2 cut(s) | 73, 124 |
| BstMAI | GTCTC | 1 cut(s) | 203 |
| BstMBI | GATC | 2 cut(s) | 70, 121 |
| BstMCI | CGRYCG | 1 cut(s) | 370 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 276 |
| BtsCI | GGATG | 2 cut(s) | 22, 55 |
| BtsIMutI | CAGTG | 1 cut(s) | 107 |
| CciI | TCATGA | 1 cut(s) | 10 |
| Cfr13I | GGNCC | 1 cut(s) | 348 |
| CviAII | CATG | 1 cut(s) | 11 |
| CviJI | RGCY | 3 cut(s) | 156, 239, 279 |
| CviKI_1 | RGCY | 3 cut(s) | 156, 239, 279 |
| DdeI | CTNAG | 1 cut(s) | 84 |
| DpnI | GATC | 2 cut(s) | 72, 123 |
| DpnII | GATC | 2 cut(s) | 70, 121 |
| Eco47I | GGWCC | 1 cut(s) | 348 |
| FaeI | CATG | 1 cut(s) | 14 |
| FaiI | YATR | 5 cut(s) | 12, 47, 185, 190, 312 |
| FatI | CATG | 1 cut(s) | 10 |
| FokI | GGATG | 2 cut(s) | 29, 62 |
| FspBI | CTAG | 1 cut(s) | 276 |
| GsuI | CTGGAG | 1 cut(s) | 261 |
| Hin1II | CATG | 1 cut(s) | 14 |
| HincII | GTYRAC | 1 cut(s) | 216 |
| HindII | GTYRAC | 1 cut(s) | 216 |
| HinfI | GANTC | 2 cut(s) | 7, 196 |
| HphI | GGTGA | 1 cut(s) | 89 |
| Hpy166II | GTNNAC | 1 cut(s) | 216 |
| Hpy188I | TCNGA | 1 cut(s) | 339 |
| Hpy188III | TCNNGA | 2 cut(s) | 11, 260 |
| Hpy8I | GTNNAC | 1 cut(s) | 216 |
| HpyAV | CCTTC | 1 cut(s) | 295 |
| HpyCH4IV | ACGT | 1 cut(s) | 148 |
| HpyCH4V | TGCA | 1 cut(s) | 305 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 276 |
| HpyF3I | CTNAG | 1 cut(s) | 84 |
| HpySE526I | ACGT | 1 cut(s) | 148 |
| Hsp92II | CATG | 1 cut(s) | 14 |
| Kzo9I | GATC | 2 cut(s) | 70, 121 |
| LmnI | GCTCC | 1 cut(s) | 153 |
| LpnPI | CCDG | 2 cut(s) | 113, 225 |
| LweI | GCATC | 1 cut(s) | 7 |
| MaeI | CTAG | 1 cut(s) | 276 |
| MaeII | ACGT | 1 cut(s) | 148 |
| MaeIII | GTNAC | 2 cut(s) | 79, 292 |
| MalI | GATC | 2 cut(s) | 72, 123 |
| MboI | GATC | 2 cut(s) | 70, 121 |
| MboII | GAAGA | 2 cut(s) | 233, 236 |
| MluCI | AATT | 4 cut(s) | 88, 246, 315, 332 |
| MlyI | GAGTC | 2 cut(s) | 16, 205 |
| MmeI | TCCRAC | 1 cut(s) | 131 |
| MnlI | CCTC | 2 cut(s) | 7, 212 |
| MseI | TTAA | 2 cut(s) | 24, 252 |
| MslI | CAYNNNNRTG | 2 cut(s) | 15, 102 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 276 |
| NdeII | GATC | 2 cut(s) | 70, 121 |
| NlaIII | CATG | 1 cut(s) | 14 |
| NmuCI | GTSAC | 1 cut(s) | 79 |
| OliI | CACNNNNGTG | 1 cut(s) | 102 |
| PagI | TCATGA | 1 cut(s) | 10 |
| PleI | GAGTC | 2 cut(s) | 15, 204 |
| PpsI | GAGTC | 2 cut(s) | 15, 204 |
| Psp1406I | AACGTT | 1 cut(s) | 148 |
| PspPI | GGNCC | 1 cut(s) | 348 |
| RseI | CAYNNNNRTG | 2 cut(s) | 15, 102 |
| SaqAI | TTAA | 2 cut(s) | 24, 252 |
| Sau3AI | GATC | 2 cut(s) | 70, 121 |
| Sau96I | GGNCC | 1 cut(s) | 348 |
| SchI | GAGTC | 2 cut(s) | 16, 205 |
| SetI | ASST | 4 cut(s) | 151, 158, 281, 287 |
| SfaNI | GCATC | 1 cut(s) | 7 |
| SinI | GGWCC | 1 cut(s) | 348 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 15, 102 |
| Sse9I | AATT | 4 cut(s) | 88, 246, 315, 332 |
| SspI | AATATT | 1 cut(s) | 256 |
| SspMI | CTAG | 1 cut(s) | 276 |
| TaiI | ACGT | 1 cut(s) | 151 |
| TaqI | TCGA | 2 cut(s) | 124, 261 |
| TaqII | GACCGA | 1 cut(s) | 356 |
| TasI | AATT | 4 cut(s) | 88, 246, 315, 332 |
| Tru1I | TTAA | 2 cut(s) | 24, 252 |
| Tru9I | TTAA | 2 cut(s) | 24, 252 |
| TscAI | CASTG | 1 cut(s) | 107 |
| TseFI | GTSAC | 1 cut(s) | 79 |
| Tsp45I | GTSAC | 1 cut(s) | 79 |
| TspDTI | ATGAA | 1 cut(s) | 327 |
| TspGWI | ACGGA | 1 cut(s) | 233 |
| TspRI | CASTG | 1 cut(s) | 107 |
| VpaK11BI | GGWCC | 1 cut(s) | 348 |
| XapI | RAATTY | 1 cut(s) | 332 |
| XspI | CTAG | 1 cut(s) | 276 |