RchiOBHm_Chr3g0457451

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
6551484 .. 6552885
1402 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42420

Sequence Viewer

Length: 1290 bp
ATGGCACTTGAGAAGGGTTCAGAGCTAGCAGAACTGACAGAGTCTTGCAAAAATATTGAAGAAGGTGTGGTGGAACAAATCCTATCAACTCTGCCTCCCAAATCTCTTATGCGATTCAAGTGCATCTCTAAATGGTGGTACCATCTCATCGCCAGTCCCAGGTTCGTAGCTCAGCACCTCTCAATTTCCAAACACAACCCCTCTCCCTGTGTCCTTATCAAGCGTTTAGTCTGCAAGGACACACACACTAAAAAGCCTGAAATGGTTTTCTCATTGCTTAACTTTTGCTATGAAAATGATAACAACAGTAATGGTGGGCTTAGCACCAATCTTTCCAGTGTGGAGGACCTTACTATTCCTACAAGGGTAGTCGAATCACTTCGCATTATAGGCCATTGTGATGGGATTGTCTGTCTAGCTTTAATCGATTATCATCAGAGGCTAGCTAAATCTAGTGAAGTGTGTCTTTGGAATCCTGCAATTCATCAATTTAAATTTCTTCCGGAGGAGCCATTCCTTCCGGATTGGTCCAAGGTACCACGCAGCCAGATGTTCGAAGAATTTGCTTACCTGCAATATTATGGTGGACATGTGATTGTTTATCCTCCAAAAGCAGTAGTATACACCATGCGAACTGATTCTTGGAGAGAGATCAAGACTTTTTCTTTGGAAAGGGAAACTAGTTACCTTTGGCCTGATACGTTTCAGCTATACTTCAAGGGAATGTGTTATTGGTCGGGATATGAGCAACAAAAGGAATTCTTCTGTGTCTACGACACTGACAAAGAAGAGGACGAACGCATTGGGCAATCGATCATTTCGTTTGATACGAGCGATGAGGTATTTGATGATATTCTGTTACCGTATGAGCTACTAGAATCTAACAATTTCATTTACCTTCGATTGCATCTTACGGTGTGGAATGAGTCTGTTGCTCTTTTCGGCTTGCATTTTGTGGATGGGCACAAAGCTACAATGTGGGTGAGGGATGATTGTGGCGATGTCAAAGGTGCTTGGACAAAACAATTAACTTTTGAATATGTAGAGTACTTTCCTTACAGGTTACCTCAAAAGATATTGGCATTTTGGAAGAGCAACGAAATTCTTGGGGTTGGAGAAAATGGCTCTATTGTCTGCTATAACCTCATTACCAAAAATGTCAAGTATCTTCAGATTCAAAGTATTCCAGATTATTTTCCACCTACTAGACACACTTTTATTCCTTTTTGTGGTATTGCTTATGTGAATAGTGTCGTTCCAATCATGAATCATGGGAAGCATTTTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

429

Amino Acids

49.92

Weight (kDa)

5.72

Isoelectric Point (pI)

38.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 115 - 403 2.3e-06 F-box associated beta propeller domain
FBA_1 PF07734 126 - 421 5.9e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 579
Acc65I GGTACC 2 cut(s) 138, 535
AccB1I GGYRCC 2 cut(s) 138, 535
AccI GTMKAC 2 cut(s) 621, 771
AccIII TCCGGA 2 cut(s) 502, 520
AcsI RAATTY 4 cut(s) 494, 560, 758, 1101
AcuI CTGAAG 1 cut(s) 1154
AfaI GTAC 3 cut(s) 140, 537, 1049
AfiI CCNNNNNNNGG 2 cut(s) 159, 1229
AflIII ACRYGT 1 cut(s) 589
AgsI TTSAA 5 cut(s) 59, 118, 718, 1037, 1178
AhlI ACTAGT 1 cut(s) 680
AjnI CCWGG 1 cut(s) 158
AjuI GAANNNNNNNTTGG 4 cut(s) 625, 657, 715, 747
AluBI AGCT 7 cut(s) 25, 170, 419, 446, 709, 871, 971
AluI AGCT 7 cut(s) 25, 170, 419, 446, 709, 871, 971
Aor13HI TCCGGA 2 cut(s) 502, 520
AoxI GGCC 2 cut(s) 391, 692
ApeKI GCWGC 1 cut(s) 543
ApoI RAATTY 4 cut(s) 494, 560, 758, 1101
ArsI GACNNNNNNTTYG 2 cut(s) 649, 681
Asp700I GAANNNNTTC 2 cut(s) 378, 637
Asp718I GGTACC 2 cut(s) 138, 535
AspS9I GGNCC 2 cut(s) 346, 528
AsuHPI GGTGA 1 cut(s) 994
AsuII TTCGAA 1 cut(s) 555
AsuNHI GCTAGC 2 cut(s) 25, 442
AvaII GGWCC 2 cut(s) 346, 528
BaeGI GKGCMC 1 cut(s) 966
BanI GGYRCC 2 cut(s) 138, 535
BbvI GCAGC 1 cut(s) 555
BccI CCATC 3 cut(s) 150, 395, 953
BcgI CGANNNNNNTGC 4 cut(s) 102, 136, 545, 579
BciT130I CCWGG 1 cut(s) 160
BcuI ACTAGT 1 cut(s) 680
BfaI CTAG 7 cut(s) 26, 416, 443, 453, 681, 875, 1206
BfuAI ACCTGC 1 cut(s) 579
BisI GCNGC 1 cut(s) 544
BlpI GCTNAGC 2 cut(s) 171, 320
BlsI GCNGC 1 cut(s) 545
BmcAI AGTACT 1 cut(s) 1049
Bme1390I CCNGG 1 cut(s) 160
Bme18I GGWCC 2 cut(s) 346, 528
BmgT120I GGNCC 2 cut(s) 346, 528
BmiI GGNNCC 3 cut(s) 140, 510, 537
BmrFI CCNGG 1 cut(s) 160
BmsI GCATC 2 cut(s) 132, 916
BmtI GCTAGC 2 cut(s) 29, 446
Bpu1102I GCTNAGC 2 cut(s) 171, 320
Bpu14I TTCGAA 1 cut(s) 555
BpuEI CTTGAG 1 cut(s) 29
Bsa29I ATCGAT 2 cut(s) 426, 812
BsaBI GATNNNNATC 1 cut(s) 432
BsaJI CCNNGG 2 cut(s) 158, 531
BsaWI WCCGGW 2 cut(s) 502, 520
BsaXI ACNNNNNCTCC 2 cut(s) 79, 109
Bsc4I CCNNNNNNNGG 2 cut(s) 159, 1229
Bse1I ACTGG 2 cut(s) 153, 336
Bse3DI GCAATG 1 cut(s) 272
Bse8I GATNNNNATC 1 cut(s) 432
BseAI TCCGGA 2 cut(s) 502, 520
BseBI CCWGG 1 cut(s) 160
BseCI ATCGAT 2 cut(s) 426, 812
BseDI CCNNGG 2 cut(s) 158, 531
BseGI GGATG 2 cut(s) 964, 994
BseJI GATNNNNATC 1 cut(s) 432
BseLI CCNNNNNNNGG 2 cut(s) 159, 1229
BseMI GCAATG 1 cut(s) 272
BseMII CTCAG 1 cut(s) 185
BseNI ACTGG 2 cut(s) 153, 336
BseRI GAGGAG 1 cut(s) 521
BseSI GKGCMC 1 cut(s) 966
BseXI GCAGC 1 cut(s) 555
BshFI GGCC 2 cut(s) 393, 694
BshNI GGYRCC 2 cut(s) 138, 535
BshVI ATCGAT 2 cut(s) 426, 812
BsiSI CCGG 2 cut(s) 503, 521
BslFI GGGAC 1 cut(s) 141
BslI CCNNNNNNNGG 2 cut(s) 159, 1229
BsmFI GGGAC 1 cut(s) 141
BsnI GGCC 2 cut(s) 393, 694
Bsp119I TTCGAA 1 cut(s) 555
Bsp1286I GDGCHC 1 cut(s) 966
Bsp13I TCCGGA 2 cut(s) 502, 520
Bsp143I GATC 2 cut(s) 651, 813
Bsp1720I GCTNAGC 2 cut(s) 171, 320
BspANI GGCC 2 cut(s) 393, 694
BspCNI CTCAG 1 cut(s) 184
BspDI ATCGAT 2 cut(s) 426, 812
BspEI TCCGGA 2 cut(s) 502, 520
BspHI TCATGA 1 cut(s) 1263
BspLI GGNNCC 3 cut(s) 140, 510, 537
BspMI ACCTGC 1 cut(s) 579
BspOI GCTAGC 2 cut(s) 29, 446
BspQI GCTCTTC 1 cut(s) 1085
BspT104I TTCGAA 1 cut(s) 555
BspT107I GGYRCC 2 cut(s) 138, 535
BsrDI GCAATG 1 cut(s) 272
BsrI ACTGG 2 cut(s) 153, 336
BssECI CCNNGG 2 cut(s) 158, 531
BssMI GATC 2 cut(s) 651, 813
BssNAI GTATAC 1 cut(s) 622
BssT1I CCWWGG 1 cut(s) 531
Bst1107I GTATAC 1 cut(s) 622
Bst2UI CCWGG 1 cut(s) 160
Bst4CI ACNGT 3 cut(s) 308, 864, 916
Bst6I CTCTTC 2 cut(s) 783, 1085
BstBI TTCGAA 1 cut(s) 555
BstC8I GCNNGC 3 cut(s) 27, 444, 947
BstDEI CTNAG 2 cut(s) 171, 320
BstEII GGTNACC 1 cut(s) 1062
BstF5I GGATG 2 cut(s) 964, 994
BstKTI GATC 2 cut(s) 654, 816
BstMBI GATC 2 cut(s) 651, 813
BstMWI GCNNNNNNNGC 1 cut(s) 390
BstNI CCWGG 1 cut(s) 160
BstNSI RCATGY 1 cut(s) 593
BstPI GGTNACC 1 cut(s) 1062
BstSCI CCNGG 1 cut(s) 158
BstSLI GKGCMC 1 cut(s) 966
BstV1I GCAGC 1 cut(s) 555
BstXI CCANNNNNNTGG 1 cut(s) 401
BstZ17I GTATAC 1 cut(s) 622
Bsu15I ATCGAT 2 cut(s) 426, 812
BsuRI GGCC 2 cut(s) 393, 694
BsuTUI ATCGAT 2 cut(s) 426, 812
BtgZI GCGATG 3 cut(s) 133, 849, 1014
BtsCI GGATG 2 cut(s) 964, 994
BtsIMutI CAGTG 2 cut(s) 343, 777
BveI ACCTGC 1 cut(s) 579
Cac8I GCNNGC 3 cut(s) 27, 444, 947
CciI TCATGA 1 cut(s) 1263
Cfr13I GGNCC 2 cut(s) 346, 528
ClaI ATCGAT 2 cut(s) 426, 812
Csp6I GTAC 3 cut(s) 139, 536, 1048
CviAII CATG 4 cut(s) 590, 628, 1264, 1271
CviQI GTAC 3 cut(s) 139, 536, 1048
DdeI CTNAG 2 cut(s) 171, 320
DpnI GATC 2 cut(s) 653, 815
DpnII GATC 2 cut(s) 651, 813
DraI TTTAAA 1 cut(s) 493
Eam1104I CTCTTC 2 cut(s) 783, 1085
EarI CTCTTC 2 cut(s) 783, 1085
Eco130I CCWWGG 1 cut(s) 531
Eco47I GGWCC 2 cut(s) 346, 528
Eco57I CTGAAG 1 cut(s) 1154
Eco91I GGTNACC 1 cut(s) 1062
EcoO109I RGGNCCY 1 cut(s) 346
EcoO65I GGTNACC 1 cut(s) 1062
EcoRI GAATTC 1 cut(s) 758
EcoRII CCWGG 1 cut(s) 158
EcoT14I CCWWGG 1 cut(s) 531
ErhI CCWWGG 1 cut(s) 531
FaeI CATG 4 cut(s) 593, 631, 1267, 1274
FalI AAGNNNNNCTT 4 cut(s) 450, 482, 746, 778
FaqI GGGAC 1 cut(s) 141
FatI CATG 4 cut(s) 589, 627, 1263, 1270
FblI GTMKAC 2 cut(s) 621, 771
Fnu4HI GCNGC 1 cut(s) 544
FokI GGATG 2 cut(s) 971, 1001
Fsp4HI GCNGC 1 cut(s) 544
FspBI CTAG 7 cut(s) 26, 416, 443, 453, 681, 875, 1206
GluI GCNGC 1 cut(s) 544
HaeIII GGCC 2 cut(s) 393, 694
HapII CCGG 2 cut(s) 503, 521
Hin1II CATG 4 cut(s) 593, 631, 1267, 1274
HinfI GANTC 9 cut(s) 41, 114, 374, 472, 638, 878, 926, 1174, 1267
HpaII CCGG 2 cut(s) 503, 521
HphI GGTGA 1 cut(s) 994
Hpy166II GTNNAC 3 cut(s) 587, 622, 772
Hpy188I TCNGA 3 cut(s) 22, 438, 1173
Hpy188III TCNNGA 6 cut(s) 503, 521, 655, 738, 1187, 1264
Hpy8I GTNNAC 3 cut(s) 587, 622, 772
HpyAV CCTTC 4 cut(s) 7, 56, 527, 908
HpyCH4III ACNGT 3 cut(s) 308, 864, 916
HpyCH4IV ACGT 1 cut(s) 701
HpyCH4V TGCA 7 cut(s) 48, 123, 234, 479, 574, 907, 949
HpyF10VI GCNNNNNNNGC 1 cut(s) 390
HpyF3I CTNAG 2 cut(s) 171, 320
HpySE526I ACGT 1 cut(s) 701
Hsp92II CATG 4 cut(s) 593, 631, 1267, 1274
Kpn2I TCCGGA 2 cut(s) 502, 520
KpnI GGTACC 2 cut(s) 142, 539
Kzo9I GATC 2 cut(s) 651, 813
LguI GCTCTTC 1 cut(s) 1085
LmnI GCTCC 1 cut(s) 508
Lsp1109I GCAGC 1 cut(s) 555
LweI GCATC 2 cut(s) 132, 916
MaeI CTAG 7 cut(s) 26, 416, 443, 453, 681, 875, 1206
MaeII ACGT 1 cut(s) 701
MaeIII GTNAC 3 cut(s) 683, 858, 1062
MalI GATC 2 cut(s) 653, 815
MboI GATC 2 cut(s) 651, 813
MboII GAAGA 7 cut(s) 71, 491, 569, 754, 800, 1102, 1160
MhlI GDGCHC 1 cut(s) 966
MluCI AATT 9 cut(s) 183, 480, 488, 494, 560, 758, 886, 1025, 1101
MlyI GAGTC 2 cut(s) 50, 935
MmeI TCCRAC 1 cut(s) 1093
MroI TCCGGA 2 cut(s) 502, 520
MroXI GAANNNNTTC 2 cut(s) 378, 637
MseI TTAA 4 cut(s) 279, 422, 492, 1028
MslI CAYNNNNRTG 1 cut(s) 399
MspI CCGG 2 cut(s) 503, 521
MspR9I CCNGG 1 cut(s) 160
MvaI CCWGG 1 cut(s) 160
MwoI GCNNNNNNNGC 1 cut(s) 390
NdeII GATC 2 cut(s) 651, 813
NheI GCTAGC 2 cut(s) 25, 442
NlaIII CATG 4 cut(s) 593, 631, 1267, 1274
NlaIV GGNNCC 3 cut(s) 140, 510, 537
NspI RCATGY 1 cut(s) 593
NspV TTCGAA 1 cut(s) 555
PagI TCATGA 1 cut(s) 1263
PciI ACATGT 1 cut(s) 589
PciSI GCTCTTC 1 cut(s) 1085
PcsI WCGNNNNNNNCGW 2 cut(s) 818, 827
PdmI GAANNNNTTC 2 cut(s) 378, 637
PfeI GAWTC 7 cut(s) 114, 374, 472, 638, 878, 1174, 1267
PflFI GACNNNGTC 1 cut(s) 40
PkrI GCNGC 1 cut(s) 545
PleI GAGTC 2 cut(s) 49, 934
PpsI GAGTC 2 cut(s) 49, 934
PpuMI RGGWCCY 1 cut(s) 346
PscI ACATGT 1 cut(s) 589
Psp5II RGGWCCY 1 cut(s) 346
Psp6I CCWGG 1 cut(s) 158
PspEI GGTNACC 1 cut(s) 1062
PspGI CCWGG 1 cut(s) 158
PspN4I GGNNCC 3 cut(s) 140, 510, 537
PspPI GGNCC 2 cut(s) 346, 528
PspPPI RGGWCCY 1 cut(s) 346
PsyI GACNNNGTC 1 cut(s) 40
RsaI GTAC 3 cut(s) 140, 537, 1049
RsaNI GTAC 3 cut(s) 139, 536, 1048
RseI CAYNNNNRTG 1 cut(s) 399
SapI GCTCTTC 1 cut(s) 1085
SaqAI TTAA 4 cut(s) 279, 422, 492, 1028
SatI GCNGC 1 cut(s) 544
Sau3AI GATC 2 cut(s) 651, 813
Sau96I GGNCC 2 cut(s) 346, 528
ScaI AGTACT 1 cut(s) 1049
SchI GAGTC 2 cut(s) 50, 935
ScrFI CCNGG 1 cut(s) 160
SduI GDGCHC 1 cut(s) 966
SfaNI GCATC 2 cut(s) 132, 916
SfuI TTCGAA 1 cut(s) 555
SinI GGWCC 2 cut(s) 346, 528
SmiI ATTTAAAT 1 cut(s) 493
SmiMI CAYNNNNRTG 1 cut(s) 399
SmlI CTYRAG 1 cut(s) 8
SmoI CTYRAG 1 cut(s) 8
SpeI ACTAGT 1 cut(s) 680
Sse9I AATT 9 cut(s) 183, 480, 488, 494, 560, 758, 886, 1025, 1101
SspI AATATT 2 cut(s) 55, 578
SspMI CTAG 7 cut(s) 26, 416, 443, 453, 681, 875, 1206
StyD4I CCNGG 1 cut(s) 158
StyI CCWWGG 1 cut(s) 531
SwaI ATTTAAAT 1 cut(s) 493
TaaI ACNGT 3 cut(s) 308, 864, 916
TaiI ACGT 1 cut(s) 704
TaqI TCGA 5 cut(s) 372, 426, 555, 812, 901
TasI AATT 9 cut(s) 183, 480, 488, 494, 560, 758, 886, 1025, 1101
TatI WGTACW 1 cut(s) 1047
TfiI GAWTC 7 cut(s) 114, 374, 472, 638, 878, 1174, 1267
Tru1I TTAA 4 cut(s) 279, 422, 492, 1028
Tru9I TTAA 4 cut(s) 279, 422, 492, 1028
TscAI CASTG 2 cut(s) 343, 784
TseI GCWGC 1 cut(s) 543
TspDTI ATGAA 4 cut(s) 306, 473, 880, 1280
TspRI CASTG 2 cut(s) 343, 784
Tth111I GACNNNGTC 1 cut(s) 40
VpaK11BI GGWCC 2 cut(s) 346, 528
XapI RAATTY 4 cut(s) 494, 560, 758, 1101
XceI RCATGY 1 cut(s) 593
XmiI GTMKAC 2 cut(s) 621, 771
XmnI GAANNNNTTC 2 cut(s) 378, 637
XspI CTAG 7 cut(s) 26, 416, 443, 453, 681, 875, 1206
ZrmI AGTACT 1 cut(s) 1049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.