Rmu_ssc0000091.1_g000004

Cyclic phosphodiesterase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000091.1
Physical Location & Seq
Reverse (-)
16430 .. 19291
2862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000091.1_g000004.1.cds

Sequence Viewer

Length: 1767 bp
atgacgttggagtttggcaaaactattgatgaagatgtggtggagcaaatcctatcaattctgccacccaaatctctgaagcgatttcagtgcgtctctaacaggtggtatgctctgatcaccagtcccaggttcgtagctaagcacctctccaattccacgcacaacaatctctccaccagtgttcttatgaagcgtgaagtccgtaaggataccaaccctgacgagactgaagagttgttctcattccttcattttcgaaatgatgaagataatgatgttgatagtgtgcatgatgagcatagctttctttctagtatccaggaattccatattccgtttcctaccggtgtaaagactccgcacgaatcacttataattataggccattgtaatgggatcatttgtctagctcaagccgtttctggtgaggtgattttatgcaacccagcaattcatgaatataagcttcttcccccctctacataccttccagattccgattggccctttctaaccacattccagttcagagatggtttgggatttggatatgatccgaactttaacgaatataaaattgttaacattggattttctgctccagaattatctacgcctgatggatttaacatttataatcctcccaaagcagctgtctacacccttggtactgatacttggagagagatcaagactgattcgttagaaacagaaactactattctttggcccgaacaattccagatgcacttcaaggatatgtgtttttggctgggacatgagcaacataaggaattggacgtgtttgatgaaggcgaggagcaattcattagggaagttatcattatgtttgatactggggatgagctttttcataatataatgttaccggatgaatttgattatccatcaaaaaattattttgttgagaaccttttagggtggaaggactccgttgctcttttgggaggaaaaatctgtcaaatatcatcgtttggaatatgggtgatagaagaatttggtggtcctaacggtgttgcttggacaaaacacataacttttgacctccctgtggaaccgttgatattttggaagagcgacagggttcttttgaatggtcctaacgacactgattatagaggacttatattctcttataatctcggtaccaaaaagcttaaaaatcttcccattcgaagcgagcggactgactctactgctattgtaattgttgcaaattatagttgtttccatgctcttttacaggctgaattttctgtatttgagtacccttctccaccagtcagtcattatatggttgacaagaaaacttactcatattcggtgtgggcaatcccatcagatgatgtgtctctcaggattaagaaagtgatggagggactgcggactgaattcggcgggccggagattgatccccacattgccgttgtgggttccatccgtatgaagcatgaggatatgctcaacaagttcatatctctccagtctcatgttatttcttcgtacaaagcaaaagttaatcaagtcgttactaggaaagttaggccacatttgagcctcctttatggttacctgacagaagaagaaaggaagaaagctcaagaaaaagtcagttatatggatgaaggcctcagcagcttgagcttctttataactcgacttgcattgtacaaaattgactacaaagacagaagtctcaaatcatgggagaagattgctgattaccccctccgatttgagtaa

Protein Analysis

588

Amino Acids

67.73

Weight (kDa)

5.31

Isoelectric Point (pI)

41.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 377, 639, 1161, 1676
Acc65I GGTACC 1 cut(s) 1169
AccB1I GGYRCC 1 cut(s) 1169
AccBSI CCGCTC 1 cut(s) 1207
AccI GTMKAC 1 cut(s) 660
AciI CCGC 4 cut(s) 362, 1207, 1408, 1422
AclWI GGATC 3 cut(s) 407, 551, 1430
AcsI RAATTY 5 cut(s) 326, 899, 1019, 1274, 1415
AcuI CTGAAG 2 cut(s) 98, 252
AfaI GTAC 5 cut(s) 673, 1171, 1292, 1529, 1694
AfiI CCNNNNNNNGG 2 cut(s) 129, 1075
AflIII ACRYGT 1 cut(s) 804
AgeI ACCGGT 1 cut(s) 347
AgsI TTSAA 2 cut(s) 757, 1117
AjiI CACGTC 1 cut(s) 805
AjnI CCWGG 2 cut(s) 128, 321
Alw26I GTCTC 5 cut(s) 100, 221, 1380, 1515, 1724
AlwI GGATC 3 cut(s) 407, 551, 1430
AoxI GGCC 6 cut(s) 385, 506, 731, 1424, 1568, 1651
ApeKI GCWGC 2 cut(s) 653, 1659
ApoI RAATTY 5 cut(s) 326, 899, 1019, 1274, 1415
ArsI GACNNNNNNTTYG 2 cut(s) 642, 674
AsiGI ACCGGT 1 cut(s) 347
Asp718I GGTACC 1 cut(s) 1169
AspS9I GGNCC 5 cut(s) 507, 732, 1028, 1121, 1424
AsuHPI GGTGA 4 cut(s) 112, 440, 445, 1021
AsuII TTCGAA 2 cut(s) 259, 1198
AvaII GGWCC 2 cut(s) 1028, 1121
BanI GGYRCC 1 cut(s) 1169
BbvCI CCTCAGC 1 cut(s) 1655
BbvI GCAGC 2 cut(s) 665, 1671
BccI CCATC 6 cut(s) 530, 617, 919, 1369, 1390, 1469
BceAI ACGGC 2 cut(s) 404, 1433
BcgI CGANNNNNNTGC 2 cut(s) 72, 106
BciT130I CCWGG 2 cut(s) 130, 323
BciVI GTATCC 2 cut(s) 205, 329
BclI TGATCA 1 cut(s) 117
BcoDI GTCTC 5 cut(s) 100, 221, 1380, 1515, 1724
BfaI CTAG 3 cut(s) 315, 410, 1557
BfuI GTATCC 2 cut(s) 205, 329
BisI GCNGC 2 cut(s) 654, 1660
BlpI GCTNAGC 1 cut(s) 141
BlsI GCNGC 2 cut(s) 655, 1661
Bme1390I CCNGG 2 cut(s) 130, 323
Bme18I GGWCC 2 cut(s) 1028, 1121
BmgBI CACGTC 1 cut(s) 805
BmgT120I GGNCC 5 cut(s) 507, 732, 1028, 1121, 1424
BmiI GGNNCC 3 cut(s) 1080, 1171, 1459
BmrFI CCNGG 2 cut(s) 130, 323
BmrI ACTGGG 1 cut(s) 870
BmsI GCATC 1 cut(s) 738
BmuI ACTGGG 1 cut(s) 870
BoxI GACNNNNGTC 1 cut(s) 1716
BplI GAGNNNNNCTC 2 cut(s) 227, 259
BpmI CTGGAG 2 cut(s) 588, 1490
Bpu10I CCTNAGC 1 cut(s) 1655
Bpu1102I GCTNAGC 1 cut(s) 141
Bpu14I TTCGAA 2 cut(s) 259, 1198
BpuEI CTTGAG 3 cut(s) 399, 1608, 1684
BsaJI CCNNGG 2 cut(s) 128, 667
BsaWI WCCGGW 2 cut(s) 347, 892
BsaXI ACNNNNNCTCC 2 cut(s) 158, 188
Bsc4I CCNNNNNNNGG 2 cut(s) 129, 1075
Bse118I RCCGGY 1 cut(s) 347
Bse1I ACTGG 6 cut(s) 123, 180, 526, 865, 1304, 1507
Bse3DI GCAATG 1 cut(s) 1443
BseBI CCWGG 2 cut(s) 130, 323
BseDI CCNNGG 2 cut(s) 128, 667
BseGI GGATG 4 cut(s) 871, 901, 1461, 1651
BseLI CCNNNNNNNGG 2 cut(s) 129, 1075
BseMI GCAATG 1 cut(s) 1443
BseMII CTCAG 2 cut(s) 1393, 1669
BseNI ACTGG 6 cut(s) 123, 180, 526, 865, 1304, 1507
BseRI GAGGAG 1 cut(s) 836
BseXI GCAGC 2 cut(s) 665, 1671
BseYI CCCAGC 2 cut(s) 448, 775
BshFI GGCC 6 cut(s) 387, 508, 733, 1426, 1570, 1653
BshNI GGYRCC 1 cut(s) 1169
BshTI ACCGGT 1 cut(s) 347
BsiSI CCGG 3 cut(s) 348, 893, 1427
BslFI GGGAC 3 cut(s) 111, 792, 1416
BslI CCNNNNNNNGG 2 cut(s) 129, 1075
BsmAI GTCTC 5 cut(s) 100, 221, 1380, 1515, 1724
BsmBI CGTCTC 1 cut(s) 100
BsmFI GGGAC 3 cut(s) 111, 792, 1416
BsnI GGCC 6 cut(s) 387, 508, 733, 1426, 1570, 1653
Bsp119I TTCGAA 2 cut(s) 259, 1198
Bsp1407I TGTACA 1 cut(s) 1692
Bsp143I GATC 5 cut(s) 117, 399, 556, 690, 1435
Bsp1720I GCTNAGC 1 cut(s) 141
BspACI CCGC 4 cut(s) 362, 1207, 1408, 1422
BspANI GGCC 6 cut(s) 387, 508, 733, 1426, 1570, 1653
BspCNI CTCAG 2 cut(s) 1392, 1668
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 3 cut(s) 1080, 1171, 1459
BspPI GGATC 3 cut(s) 407, 551, 1430
BspQI GCTCTTC 1 cut(s) 1091
BspT104I TTCGAA 2 cut(s) 259, 1198
BspT107I GGYRCC 1 cut(s) 1169
BsrBI CCGCTC 1 cut(s) 1207
BsrDI GCAATG 1 cut(s) 1443
BsrFI RCCGGY 1 cut(s) 347
BsrGI TGTACA 1 cut(s) 1692
BsrI ACTGG 6 cut(s) 123, 180, 526, 865, 1304, 1507
BssAI RCCGGY 1 cut(s) 347
BssECI CCNNGG 2 cut(s) 128, 667
BssMI GATC 5 cut(s) 117, 399, 556, 690, 1435
BssT1I CCWWGG 1 cut(s) 667
Bst2UI CCWGG 2 cut(s) 130, 323
Bst4CI ACNGT 2 cut(s) 1037, 1083
Bst6I CTCTTC 2 cut(s) 228, 1091
BstAUI TGTACA 1 cut(s) 1692
BstBI TTCGAA 2 cut(s) 259, 1198
BstC8I GCNNGC 2 cut(s) 1205, 1424
BstDEI CTNAG 3 cut(s) 141, 1379, 1655
BstEII GGTNACC 1 cut(s) 1592
BstF5I GGATG 4 cut(s) 871, 901, 1461, 1651
BstKTI GATC 5 cut(s) 120, 402, 559, 693, 1438
BstMAI GTCTC 5 cut(s) 100, 221, 1380, 1515, 1724
BstMBI GATC 5 cut(s) 117, 399, 556, 690, 1435
BstMWI GCNNNNNNNGC 3 cut(s) 298, 1659, 1665
BstNI CCWGG 2 cut(s) 130, 323
BstPAI GACNNNNGTC 1 cut(s) 1716
BstPI GGTNACC 1 cut(s) 1592
BstSCI CCNGG 2 cut(s) 128, 321
BstV1I GCAGC 2 cut(s) 665, 1671
BstXI CCANNNNNNTGG 1 cut(s) 395
BsuI GTATCC 2 cut(s) 205, 329
BsuRI GGCC 6 cut(s) 387, 508, 733, 1426, 1570, 1653
BtrI CACGTC 1 cut(s) 805
BtsCI GGATG 4 cut(s) 871, 901, 1461, 1651
BtsIMutI CAGTG 3 cut(s) 95, 187, 1131
Cac8I GCNNGC 2 cut(s) 1205, 1424
CciI TCATGA 1 cut(s) 457
Cfr10I RCCGGY 1 cut(s) 347
Cfr13I GGNCC 5 cut(s) 507, 732, 1028, 1121, 1424
CseI GACGC 1 cut(s) 82
Csp6I GTAC 5 cut(s) 672, 1170, 1291, 1528, 1693
CspAI ACCGGT 1 cut(s) 347
CviAII CATG 7 cut(s) 293, 458, 782, 1256, 1475, 1514, 1728
CviQI GTAC 5 cut(s) 672, 1170, 1291, 1528, 1693
DdeI CTNAG 3 cut(s) 141, 1379, 1655
DpnI GATC 5 cut(s) 119, 401, 558, 692, 1437
DpnII GATC 5 cut(s) 117, 399, 556, 690, 1435
Eam1104I CTCTTC 2 cut(s) 228, 1091
EarI CTCTTC 2 cut(s) 228, 1091
Eco130I CCWWGG 1 cut(s) 667
Eco147I AGGCCT 1 cut(s) 1653
Eco47I GGWCC 2 cut(s) 1028, 1121
Eco57I CTGAAG 2 cut(s) 98, 252
Eco91I GGTNACC 1 cut(s) 1592
EcoO65I GGTNACC 1 cut(s) 1592
EcoRI GAATTC 2 cut(s) 326, 1415
EcoRII CCWGG 2 cut(s) 128, 321
EcoT14I CCWWGG 1 cut(s) 667
ErhI CCWWGG 1 cut(s) 667
Esp3I CGTCTC 1 cut(s) 100
FaeI CATG 7 cut(s) 296, 461, 785, 1259, 1478, 1517, 1731
FaqI GGGAC 3 cut(s) 111, 792, 1416
FatI CATG 7 cut(s) 292, 457, 781, 1255, 1474, 1513, 1727
FauI CCCGC 1 cut(s) 1415
FbaI TGATCA 1 cut(s) 117
FblI GTMKAC 1 cut(s) 660
Fnu4HI GCNGC 2 cut(s) 654, 1660
FokI GGATG 4 cut(s) 878, 908, 1448, 1658
Fsp4HI GCNGC 2 cut(s) 654, 1660
FspBI CTAG 3 cut(s) 315, 410, 1557
GluI GCNGC 2 cut(s) 654, 1660
GsaI CCCAGC 2 cut(s) 452, 779
GsuI CTGGAG 2 cut(s) 588, 1490
HaeIII GGCC 6 cut(s) 387, 508, 733, 1426, 1570, 1653
HapII CCGG 3 cut(s) 348, 893, 1427
HgaI GACGC 1 cut(s) 82
Hin1II CATG 7 cut(s) 296, 461, 785, 1259, 1478, 1517, 1731
HincII GTYRAC 2 cut(s) 586, 1324
HindII GTYRAC 2 cut(s) 586, 1324
HindIII AAGCTT 2 cut(s) 467, 1178
HinfI GANTC 6 cut(s) 358, 368, 497, 701, 953, 1214
HpaI GTTAAC 1 cut(s) 586
HpaII CCGG 3 cut(s) 348, 893, 1427
HphI GGTGA 4 cut(s) 112, 440, 445, 1021
Hpy166II GTNNAC 3 cut(s) 586, 661, 1324
Hpy188I TCNGA 7 cut(s) 78, 117, 502, 533, 561, 1366, 1757
Hpy188III TCNNGA 7 cut(s) 458, 494, 605, 694, 745, 1381, 1625
Hpy8I GTNNAC 3 cut(s) 586, 661, 1324
HpyAV CCTTC 6 cut(s) 260, 500, 809, 943, 1305, 1643
HpyCH4III ACNGT 2 cut(s) 1037, 1083
HpyCH4IV ACGT 2 cut(s) 5, 804
HpyCH4V TGCA 5 cut(s) 292, 444, 751, 1238, 1688
HpyF10VI GCNNNNNNNGC 3 cut(s) 298, 1659, 1665
HpyF3I CTNAG 3 cut(s) 141, 1379, 1655
HpySE526I ACGT 2 cut(s) 5, 804
Hsp92II CATG 7 cut(s) 296, 461, 785, 1259, 1478, 1517, 1731
KpnI GGTACC 1 cut(s) 1173
Ksp22I TGATCA 1 cut(s) 117
KspAI GTTAAC 1 cut(s) 586
Kzo9I GATC 5 cut(s) 117, 399, 556, 690, 1435
LguI GCTCTTC 1 cut(s) 1091
LmnI GCTCC 3 cut(s) 43, 607, 823
Lsp1109I GCAGC 2 cut(s) 665, 1671
LweI GCATC 1 cut(s) 738
MaeI CTAG 3 cut(s) 315, 410, 1557
MaeII ACGT 2 cut(s) 5, 804
MaeIII GTNAC 3 cut(s) 888, 1552, 1592
MalI GATC 5 cut(s) 119, 401, 558, 692, 1437
MbiI CCGCTC 1 cut(s) 1207
MboI GATC 5 cut(s) 117, 399, 556, 690, 1435
MlyI GAGTC 3 cut(s) 352, 947, 1208
MseI TTAA 6 cut(s) 567, 585, 630, 1182, 1386, 1542
MslI CAYNNNNRTG 2 cut(s) 393, 1466
MspA1I CMGCKG 1 cut(s) 656
MspI CCGG 3 cut(s) 348, 893, 1427
MspR9I CCNGG 2 cut(s) 130, 323
MvaI CCWGG 2 cut(s) 130, 323
MwoI GCNNNNNNNGC 3 cut(s) 298, 1659, 1665
NdeII GATC 5 cut(s) 117, 399, 556, 690, 1435
NlaIII CATG 7 cut(s) 296, 461, 785, 1259, 1478, 1517, 1731
NlaIV GGNNCC 3 cut(s) 1080, 1171, 1459
NspV TTCGAA 2 cut(s) 259, 1198
PagI TCATGA 1 cut(s) 457
PceI AGGCCT 1 cut(s) 1653
PciSI GCTCTTC 1 cut(s) 1091
PfeI GAWTC 3 cut(s) 368, 497, 701
PfoI TCCNGGA 1 cut(s) 321
PinAI ACCGGT 1 cut(s) 347
PkrI GCNGC 2 cut(s) 655, 1661
PleI GAGTC 3 cut(s) 352, 947, 1208
PpsI GAGTC 3 cut(s) 352, 947, 1208
PshAI GACNNNNGTC 1 cut(s) 1716
PsiI TTATAA 4 cut(s) 377, 639, 1161, 1676
Psp6I CCWGG 2 cut(s) 128, 321
PspEI GGTNACC 1 cut(s) 1592
PspFI CCCAGC 2 cut(s) 448, 775
PspGI CCWGG 2 cut(s) 128, 321
PspN4I GGNNCC 3 cut(s) 1080, 1171, 1459
PspPI GGNCC 5 cut(s) 507, 732, 1028, 1121, 1424
PvuII CAGCTG 1 cut(s) 656
RsaI GTAC 5 cut(s) 673, 1171, 1292, 1529, 1694
RsaNI GTAC 5 cut(s) 672, 1170, 1291, 1528, 1693
RseI CAYNNNNRTG 2 cut(s) 393, 1466
SapI GCTCTTC 1 cut(s) 1091
SaqAI TTAA 6 cut(s) 567, 585, 630, 1182, 1386, 1542
SatI GCNGC 2 cut(s) 654, 1660
Sau3AI GATC 5 cut(s) 117, 399, 556, 690, 1435
Sau96I GGNCC 5 cut(s) 507, 732, 1028, 1121, 1424
SchI GAGTC 3 cut(s) 352, 947, 1208
ScrFI CCNGG 2 cut(s) 130, 323
SfaNI GCATC 1 cut(s) 738
SfuI TTCGAA 2 cut(s) 259, 1198
SinI GGWCC 2 cut(s) 1028, 1121
SmiMI CAYNNNNRTG 2 cut(s) 393, 1466
SmlI CTYRAG 3 cut(s) 414, 1623, 1663
SmoI CTYRAG 3 cut(s) 414, 1623, 1663
SseBI AGGCCT 1 cut(s) 1653
SsiI CCGC 4 cut(s) 362, 1207, 1408, 1422
SspMI CTAG 3 cut(s) 315, 410, 1557
StuI AGGCCT 1 cut(s) 1653
StyD4I CCNGG 2 cut(s) 128, 321
StyI CCWWGG 1 cut(s) 667
TaaI ACNGT 2 cut(s) 1037, 1083
TaiI ACGT 2 cut(s) 8, 807
TaqI TCGA 3 cut(s) 259, 1198, 1681
TatI WGTACW 1 cut(s) 1692
TfiI GAWTC 3 cut(s) 368, 497, 701
Tru1I TTAA 6 cut(s) 567, 585, 630, 1182, 1386, 1542
Tru9I TTAA 6 cut(s) 567, 585, 630, 1182, 1386, 1542
TscAI CASTG 3 cut(s) 95, 187, 1138
TseI GCWGC 2 cut(s) 653, 1659
TspGWI ACGGA 4 cut(s) 194, 327, 946, 1454
TspRI CASTG 3 cut(s) 95, 187, 1138
VpaK11BI GGWCC 2 cut(s) 1028, 1121
XapI RAATTY 5 cut(s) 326, 899, 1019, 1274, 1415
XcmI CCANNNNNNNNNTGG 2 cut(s) 501, 533
XmiI GTMKAC 1 cut(s) 660
XspI CTAG 3 cut(s) 315, 410, 1557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.