Cyclic phosphodiesterase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Got1 | PF04178 | 289 - 331 | 7.9e-06 | Got1/Sft2-like family |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1429 |
| AccB1I | GGYRCC | 1 cut(s) | 264 |
| AciI | CCGC | 1 cut(s) | 1469 |
| AclWI | GGATC | 5 cut(s) | 156, 473, 716, 747, 1247 |
| AcsI | RAATTY | 1 cut(s) | 533 |
| AcuI | CTGAAG | 6 cut(s) | 416, 468, 1249, 1294, 1339, 1384 |
| AfaI | GTAC | 2 cut(s) | 681, 904 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 31, 127, 601, 731, 1065 |
| AflIII | ACRYGT | 1 cut(s) | 1245 |
| AgeI | ACCGGT | 1 cut(s) | 682 |
| AgsI | TTSAA | 8 cut(s) | 251, 259, 310, 380, 533, 584, 717, 1117 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 56, 88 |
| AleI | CACNNNNGTG | 2 cut(s) | 25, 121 |
| AluBI | AGCT | 5 cut(s) | 446, 521, 652, 851, 1113 |
| AluI | AGCT | 5 cut(s) | 446, 521, 652, 851, 1113 |
| Alw21I | GWGCWC | 1 cut(s) | 1162 |
| Alw26I | GTCTC | 3 cut(s) | 441, 722, 1144 |
| Alw44I | GTGCAC | 1 cut(s) | 1158 |
| AlwI | GGATC | 5 cut(s) | 156, 473, 716, 747, 1247 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 482, 1024 |
| Ama87I | CYCGRG | 1 cut(s) | 441 |
| AoxI | GGCC | 4 cut(s) | 411, 544, 1001, 1098 |
| ApaLI | GTGCAC | 1 cut(s) | 1158 |
| ApeKI | GCWGC | 2 cut(s) | 398, 1024 |
| ApoI | RAATTY | 1 cut(s) | 533 |
| AsiGI | ACCGGT | 1 cut(s) | 682 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 588 |
| AspS9I | GGNCC | 3 cut(s) | 545, 1002, 1098 |
| AsuHPI | GGTGA | 7 cut(s) | 25, 121, 315, 337, 616, 683, 1180 |
| AsuNHI | GCTAGC | 1 cut(s) | 851 |
| AvaI | CYCGRG | 1 cut(s) | 441 |
| BaeGI | GKGCMC | 2 cut(s) | 836, 1162 |
| BanI | GGYRCC | 1 cut(s) | 264 |
| BanII | GRGCYC | 2 cut(s) | 20, 116 |
| BbsI | GAAGAC | 1 cut(s) | 456 |
| Bbv12I | GWGCWC | 1 cut(s) | 1162 |
| BbvI | GCAGC | 2 cut(s) | 410, 1011 |
| BccI | CCATC | 4 cut(s) | 545, 884, 939, 1146 |
| BceAI | ACGGC | 1 cut(s) | 579 |
| BciVI | GTATCC | 1 cut(s) | 1169 |
| BclI | TGATCA | 1 cut(s) | 1015 |
| BcoDI | GTCTC | 3 cut(s) | 441, 722, 1144 |
| BfaI | CTAG | 5 cut(s) | 600, 623, 852, 1065, 1149 |
| BfuI | GTATCC | 1 cut(s) | 1169 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1009 |
| BisI | GCNGC | 3 cut(s) | 399, 1025, 1469 |
| BlsI | GCNGC | 3 cut(s) | 400, 1026, 1470 |
| BmeT110I | CYCGRG | 1 cut(s) | 441 |
| BmgT120I | GGNCC | 3 cut(s) | 545, 1002, 1098 |
| BmiI | GGNNCC | 2 cut(s) | 266, 471 |
| BmrI | ACTGGG | 2 cut(s) | 813, 831 |
| BmsI | GCATC | 1 cut(s) | 906 |
| BmtI | GCTAGC | 1 cut(s) | 855 |
| BmuI | ACTGGG | 2 cut(s) | 813, 831 |
| BpiI | GAAGAC | 1 cut(s) | 456 |
| BpmI | CTGGAG | 3 cut(s) | 142, 209, 1030 |
| BpuEI | CTTGAG | 1 cut(s) | 1027 |
| BsaJI | CCNNGG | 3 cut(s) | 408, 573, 656 |
| BsaWI | WCCGGW | 4 cut(s) | 24, 120, 682, 1190 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 41, 71, 137, 167, 207, 230, 237, 260 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 31, 127, 601, 731, 1065 |
| Bse118I | RCCGGY | 1 cut(s) | 682 |
| Bse1I | ACTGG | 3 cut(s) | 819, 837, 1047 |
| BseDI | CCNNGG | 3 cut(s) | 408, 573, 656 |
| BseGI | GGATG | 4 cut(s) | 583, 666, 931, 1074 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 31, 127, 601, 731, 1065 |
| BseMII | CTCAG | 2 cut(s) | 308, 453 |
| BseNI | ACTGG | 3 cut(s) | 819, 837, 1047 |
| BseRI | GAGGAG | 3 cut(s) | 71, 158, 167 |
| BseSI | GKGCMC | 2 cut(s) | 836, 1162 |
| BseXI | GCAGC | 2 cut(s) | 410, 1011 |
| BseYI | CCCAGC | 5 cut(s) | 1032, 1258, 1303, 1348, 1393 |
| BsgI | GTGCAG | 1 cut(s) | 843 |
| BshFI | GGCC | 4 cut(s) | 413, 546, 1003, 1100 |
| BshNI | GGYRCC | 1 cut(s) | 264 |
| BshTI | ACCGGT | 1 cut(s) | 682 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1162 |
| BsiHKCI | CYCGRG | 1 cut(s) | 441 |
| BsiSI | CCGG | 4 cut(s) | 25, 121, 683, 1191 |
| BslFI | GGGAC | 1 cut(s) | 1273 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 31, 127, 601, 731, 1065 |
| BsmAI | GTCTC | 3 cut(s) | 441, 722, 1144 |
| BsmFI | GGGAC | 1 cut(s) | 1273 |
| BsmI | GAATGC | 4 cut(s) | 369, 375, 1282, 1327 |
| BsnI | GGCC | 4 cut(s) | 413, 546, 1003, 1100 |
| BsoBI | CYCGRG | 1 cut(s) | 441 |
| Bsp1286I | GDGCHC | 4 cut(s) | 20, 116, 836, 1162 |
| Bsp1407I | TGTACA | 1 cut(s) | 902 |
| Bsp19I | CCATGG | 1 cut(s) | 656 |
| BspACI | CCGC | 1 cut(s) | 1469 |
| BspANI | GGCC | 4 cut(s) | 413, 546, 1003, 1100 |
| BspCNI | CTCAG | 2 cut(s) | 307, 454 |
| BspLI | GGNNCC | 2 cut(s) | 266, 471 |
| BspOI | GCTAGC | 1 cut(s) | 855 |
| BspPI | GGATC | 5 cut(s) | 156, 473, 716, 747, 1247 |
| BspT107I | GGYRCC | 1 cut(s) | 264 |
| BsrFI | RCCGGY | 1 cut(s) | 682 |
| BsrGI | TGTACA | 1 cut(s) | 902 |
| BsrI | ACTGG | 3 cut(s) | 819, 837, 1047 |
| BssAI | RCCGGY | 1 cut(s) | 682 |
| BssECI | CCNNGG | 3 cut(s) | 408, 573, 656 |
| BssT1I | CCWWGG | 2 cut(s) | 573, 656 |
| Bst4CI | ACNGT | 3 cut(s) | 13, 109, 1085 |
| Bst6I | CTCTTC | 2 cut(s) | 1112, 1206 |
| BstAUI | TGTACA | 1 cut(s) | 902 |
| BstC8I | GCNNGC | 4 cut(s) | 474, 853, 1368, 1413 |
| BstDEI | CTNAG | 3 cut(s) | 294, 462, 743 |
| BstDSI | CCRYGG | 1 cut(s) | 656 |
| BstEII | GGTNACC | 1 cut(s) | 689 |
| BstF5I | GGATG | 4 cut(s) | 583, 666, 931, 1074 |
| BstMAI | GTCTC | 3 cut(s) | 441, 722, 1144 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 398, 1009 |
| BstNSI | RCATGY | 2 cut(s) | 1249, 1415 |
| BstPI | GGTNACC | 1 cut(s) | 689 |
| BstSLI | GKGCMC | 2 cut(s) | 836, 1162 |
| BstV1I | GCAGC | 2 cut(s) | 410, 1011 |
| BstV2I | GAAGAC | 1 cut(s) | 456 |
| BstX2I | RGATCY | 4 cut(s) | 161, 478, 739, 1239 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 27, 123, 883 |
| BstYI | RGATCY | 4 cut(s) | 161, 478, 739, 1239 |
| BsuI | GTATCC | 1 cut(s) | 1169 |
| BsuRI | GGCC | 4 cut(s) | 413, 546, 1003, 1100 |
| BtgI | CCRYGG | 1 cut(s) | 656 |
| BtsCI | GGATG | 4 cut(s) | 583, 666, 931, 1074 |
| BtsI | GCAGTG | 1 cut(s) | 274 |
| BtsIMutI | CAGTG | 2 cut(s) | 274, 826 |
| Cac8I | GCNNGC | 4 cut(s) | 474, 853, 1368, 1413 |
| CaiI | CAGNNNCTG | 2 cut(s) | 482, 1024 |
| Cfr10I | RCCGGY | 1 cut(s) | 682 |
| Cfr13I | GGNCC | 3 cut(s) | 545, 1002, 1098 |
| Csp6I | GTAC | 2 cut(s) | 680, 903 |
| CspAI | ACCGGT | 1 cut(s) | 682 |
| CviAII | CATG | 3 cut(s) | 657, 1246, 1412 |
| CviQI | GTAC | 2 cut(s) | 680, 903 |
| DdeI | CTNAG | 3 cut(s) | 294, 462, 743 |
| DraI | TTTAAA | 1 cut(s) | 538 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1429 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1429 |
| Eam1104I | CTCTTC | 2 cut(s) | 1112, 1206 |
| EarI | CTCTTC | 2 cut(s) | 1112, 1206 |
| Eco130I | CCWWGG | 2 cut(s) | 573, 656 |
| Eco147I | AGGCCT | 1 cut(s) | 413 |
| Eco24I | GRGCYC | 2 cut(s) | 20, 116 |
| Eco32I | GATATC | 1 cut(s) | 706 |
| Eco57I | CTGAAG | 6 cut(s) | 416, 468, 1249, 1294, 1339, 1384 |
| Eco88I | CYCGRG | 1 cut(s) | 441 |
| Eco91I | GGTNACC | 1 cut(s) | 689 |
| EcoO65I | GGTNACC | 1 cut(s) | 689 |
| EcoRV | GATATC | 1 cut(s) | 706 |
| EcoT14I | CCWWGG | 2 cut(s) | 573, 656 |
| EcoT22I | ATGCAT | 4 cut(s) | 772, 1282, 1327, 1417 |
| EcoT38I | GRGCYC | 2 cut(s) | 20, 116 |
| ErhI | CCWWGG | 2 cut(s) | 573, 656 |
| FaeI | CATG | 3 cut(s) | 660, 1249, 1415 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 736, 768 |
| FaqI | GGGAC | 1 cut(s) | 1273 |
| FatI | CATG | 3 cut(s) | 656, 1245, 1411 |
| FbaI | TGATCA | 1 cut(s) | 1015 |
| Fnu4HI | GCNGC | 3 cut(s) | 399, 1025, 1469 |
| FokI | GGATG | 4 cut(s) | 590, 673, 918, 1081 |
| FriOI | GRGCYC | 2 cut(s) | 20, 116 |
| Fsp4HI | GCNGC | 3 cut(s) | 399, 1025, 1469 |
| FspBI | CTAG | 5 cut(s) | 600, 623, 852, 1065, 1149 |
| GluI | GCNGC | 3 cut(s) | 399, 1025, 1469 |
| GsaI | CCCAGC | 5 cut(s) | 1036, 1262, 1307, 1352, 1397 |
| GsuI | CTGGAG | 3 cut(s) | 142, 209, 1030 |
| HaeIII | GGCC | 4 cut(s) | 413, 546, 1003, 1100 |
| HapII | CCGG | 4 cut(s) | 25, 121, 683, 1191 |
| Hin1II | CATG | 3 cut(s) | 660, 1249, 1415 |
| HincII | GTYRAC | 1 cut(s) | 636 |
| HindII | GTYRAC | 1 cut(s) | 636 |
| HindIII | AAGCTT | 1 cut(s) | 1111 |
| HinfI | GANTC | 7 cut(s) | 56, 152, 336, 452, 967, 1061, 1090 |
| HpaI | GTTAAC | 1 cut(s) | 636 |
| HpaII | CCGG | 4 cut(s) | 25, 121, 683, 1191 |
| HphI | GGTGA | 7 cut(s) | 25, 121, 315, 337, 616, 683, 1180 |
| Hpy166II | GTNNAC | 4 cut(s) | 636, 905, 1160, 1231 |
| Hpy188III | TCNNGA | 9 cut(s) | 40, 136, 159, 226, 232, 482, 725, 779, 891 |
| Hpy8I | GTNNAC | 4 cut(s) | 636, 905, 1160, 1231 |
| HpyAV | CCTTC | 9 cut(s) | 40, 279, 536, 767, 1201, 1273, 1318, 1363, 1408 |
| HpyCH4III | ACNGT | 3 cut(s) | 13, 109, 1085 |
| HpyCH4IV | ACGT | 1 cut(s) | 1504 |
| HpyCH4V | TGCA | 8 cut(s) | 301, 770, 824, 947, 1160, 1280, 1325, 1415 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 398, 1009 |
| HpyF3I | CTNAG | 3 cut(s) | 294, 462, 743 |
| HpySE526I | ACGT | 1 cut(s) | 1504 |
| Hsp92II | CATG | 3 cut(s) | 660, 1249, 1415 |
| Ksp22I | TGATCA | 1 cut(s) | 1015 |
| KspAI | GTTAAC | 1 cut(s) | 636 |
| LmnI | GCTCC | 2 cut(s) | 469, 657 |
| Lsp1109I | GCAGC | 2 cut(s) | 410, 1011 |
| LweI | GCATC | 1 cut(s) | 906 |
| MaeI | CTAG | 5 cut(s) | 600, 623, 852, 1065, 1149 |
| MaeII | ACGT | 1 cut(s) | 1504 |
| MaeIII | GTNAC | 4 cut(s) | 136, 232, 689, 1049 |
| MboII | GAAGA | 5 cut(s) | 461, 919, 981, 1129, 1223 |
| MflI | RGATCY | 4 cut(s) | 161, 478, 739, 1239 |
| MhlI | GDGCHC | 4 cut(s) | 20, 116, 836, 1162 |
| MluCI | AATT | 6 cut(s) | 251, 528, 533, 712, 948, 1134 |
| MlyI | GAGTC | 3 cut(s) | 65, 161, 446 |
| MmeI | TCCRAC | 3 cut(s) | 12, 108, 447 |
| Mph1103I | ATGCAT | 4 cut(s) | 772, 1282, 1327, 1417 |
| MroXI | GAANNNNTTC | 1 cut(s) | 588 |
| MseI | TTAA | 4 cut(s) | 387, 537, 635, 1073 |
| MslI | CAYNNNNRTG | 4 cut(s) | 25, 90, 121, 186 |
| MspA1I | CMGCKG | 1 cut(s) | 1471 |
| MspI | CCGG | 4 cut(s) | 25, 121, 683, 1191 |
| Mva1269I | GAATGC | 4 cut(s) | 369, 375, 1282, 1327 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 398, 1009 |
| NcoI | CCATGG | 1 cut(s) | 656 |
| NheI | GCTAGC | 1 cut(s) | 851 |
| NlaIII | CATG | 3 cut(s) | 660, 1249, 1415 |
| NlaIV | GGNNCC | 2 cut(s) | 266, 471 |
| NmeAIII | GCCGAG | 1 cut(s) | 979 |
| NmuCI | GTSAC | 4 cut(s) | 136, 232, 689, 1049 |
| NsiI | ATGCAT | 4 cut(s) | 772, 1282, 1327, 1417 |
| NspI | RCATGY | 2 cut(s) | 1249, 1415 |
| OliI | CACNNNNGTG | 2 cut(s) | 25, 121 |
| PaeI | GCATGC | 1 cut(s) | 1415 |
| PceI | AGGCCT | 1 cut(s) | 413 |
| PciI | ACATGT | 1 cut(s) | 1245 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1501 |
| PctI | GAATGC | 4 cut(s) | 369, 375, 1282, 1327 |
| PdmI | GAANNNNTTC | 1 cut(s) | 588 |
| PfeI | GAWTC | 4 cut(s) | 336, 967, 1061, 1090 |
| PinAI | ACCGGT | 1 cut(s) | 682 |
| PkrI | GCNGC | 3 cut(s) | 400, 1026, 1470 |
| PleI | GAGTC | 3 cut(s) | 64, 160, 446 |
| PpsI | GAGTC | 3 cut(s) | 64, 160, 446 |
| PscI | ACATGT | 1 cut(s) | 1245 |
| PspEI | GGTNACC | 1 cut(s) | 689 |
| PspFI | CCCAGC | 5 cut(s) | 1032, 1258, 1303, 1348, 1393 |
| PspN4I | GGNNCC | 2 cut(s) | 266, 471 |
| PspPI | GGNCC | 3 cut(s) | 545, 1002, 1098 |
| PstNI | CAGNNNCTG | 2 cut(s) | 482, 1024 |
| PsuI | RGATCY | 4 cut(s) | 161, 478, 739, 1239 |
| RsaI | GTAC | 2 cut(s) | 681, 904 |
| RsaNI | GTAC | 2 cut(s) | 680, 903 |
| RseI | CAYNNNNRTG | 4 cut(s) | 25, 90, 121, 186 |
| SaqAI | TTAA | 4 cut(s) | 387, 537, 635, 1073 |
| SatI | GCNGC | 3 cut(s) | 399, 1025, 1469 |
| Sau96I | GGNCC | 3 cut(s) | 545, 1002, 1098 |
| SchI | GAGTC | 3 cut(s) | 65, 161, 446 |
| SduI | GDGCHC | 4 cut(s) | 20, 116, 836, 1162 |
| SfaNI | GCATC | 1 cut(s) | 906 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 25, 90, 121, 186 |
| SmlI | CTYRAG | 1 cut(s) | 1006 |
| SmoI | CTYRAG | 1 cut(s) | 1006 |
| SphI | GCATGC | 1 cut(s) | 1415 |
| Sse9I | AATT | 6 cut(s) | 251, 528, 533, 712, 948, 1134 |
| SseBI | AGGCCT | 1 cut(s) | 413 |
| SsiI | CCGC | 1 cut(s) | 1469 |
| SspI | AATATT | 1 cut(s) | 699 |
| SspMI | CTAG | 5 cut(s) | 600, 623, 852, 1065, 1149 |
| StuI | AGGCCT | 1 cut(s) | 413 |
| StyI | CCWWGG | 2 cut(s) | 573, 656 |
| TaaI | ACNGT | 3 cut(s) | 13, 109, 1085 |
| TaiI | ACGT | 1 cut(s) | 1507 |
| TaqI | TCGA | 1 cut(s) | 914 |
| TasI | AATT | 6 cut(s) | 251, 528, 533, 712, 948, 1134 |
| TatI | WGTACW | 1 cut(s) | 902 |
| TauI | GCSGC | 1 cut(s) | 1471 |
| TfiI | GAWTC | 4 cut(s) | 336, 967, 1061, 1090 |
| Tru1I | TTAA | 4 cut(s) | 387, 537, 635, 1073 |
| Tru9I | TTAA | 4 cut(s) | 387, 537, 635, 1073 |
| TscAI | CASTG | 2 cut(s) | 281, 826 |
| TseFI | GTSAC | 4 cut(s) | 136, 232, 689, 1049 |
| TseI | GCWGC | 2 cut(s) | 398, 1024 |
| Tsp45I | GTSAC | 4 cut(s) | 136, 232, 689, 1049 |
| TspDTI | ATGAA | 2 cut(s) | 59, 1122 |
| TspGWI | ACGGA | 3 cut(s) | 155, 251, 408 |
| TspRI | CASTG | 2 cut(s) | 281, 826 |
| VneI | GTGCAC | 1 cut(s) | 1158 |
| XapI | RAATTY | 1 cut(s) | 533 |
| XceI | RCATGY | 2 cut(s) | 1249, 1415 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 732 |
| XmnI | GAANNNNTTC | 1 cut(s) | 588 |
| XspI | CTAG | 5 cut(s) | 600, 623, 852, 1065, 1149 |
| Zsp2I | ATGCAT | 4 cut(s) | 772, 1282, 1327, 1417 |