FvH4_6g06690

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000046
Physical Location & Seq
Reverse (-)
3962839 .. 3964062
1224 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g06690.t1

Sequence Viewer

Length: 1224 bp
ATGGAGAAGTTCTGCAAAATGACAGAAGAGATGGTGGTGTCAATCCTATCACGGTTGCTTCCGAAATCTCTAATGCGATTTAAGTGCATCCACAAATCCTGGCATTCTCTGATCAATAGTCCCCAGTTCATTTCCAAGCATCTCCACTCTCACCAGAACCTGTTTTCCTCCACAACCATCCTCTTAAAGCGTCCTGTAATGCGCAGAACTGACACTGGGATTGAGGAAATTGTTTGTTCGTTCCTTAATCTTCGTAATGCAAACGATGGTGGTGGGTATAACCTTCGTTATGATATCAAGGACCTCGAGTTTCCGCCTTCAATGGGTTTAAAAACTAGGGGACAATTTATTCAGATACCTATTGATCGACGTTATCATGATTGCGCATATATCATTGGTCATTGTGATGGGGTATTCTGTCTAGCTCTTTATGATGCAAAACACCTTGTTTTGTACAATCCAGCAATCAAAGAATTCAAGTTTCTTCCCGAGTCATGCCTTCAAGATAAGAACATGGGTTCAGTGGGATTTGGCTATGATCCCAAGTCCGAAGATTATATACTCGTTAACGTTGTAAGTTACGGCGAGCAATATTACAAGGATGATCGTCTCGTTATTGATCCTTTGAGAGCAGAAGTTTACACAATGAGTACCAATTGTTGGAGAGAGATCAAGATTCACAATCTGGAAACAGAAACTACGTTTATTTGGCCTAGACATTTTCAAGTGTACTTCAAGGGTAATTGTTACTGGTTGGCACATGAAAAAAGGAAGGAATATATCACTTTGTATGACAGACTTGAAGAGTACTACATTTGGGAAGCAATTGTTTGTTTTGACACCGCCGATCGGATTTTCCGAAATATATTGGTTCCGGATTGCTTGTACGAATTTCCGATGCATGACTTGGACCTTACAGTGTGGAACGATTCCACTGCTCTTTTTGGGTTTTATCGTGGTGGAAGTCGACCCTTTGAGATTTGGGTGATGACTAAGTTTGATGGTCTCAACTCTTCGTGGATTAAACAGCTTTCCGTCGACATTGCGAGATCTCCTATACCATTGACACTTTGGGAAAGCAATGAGATTCTTTTGGTTTTCATACGTAAACAAATAGCTTTGTACAGCTTTGTAAATGAGAAGTACCAGTATTTACCAGTTTATGGTGCGAGTTTTTTTCAGGCTATTCCTTATGTAAATAGTATAGTTCCAGTCAAGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

408

Amino Acids

48.0

Weight (kDa)

7.16

Isoelectric Point (pI)

48.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 126 - 377 2.1e-28 F-box associated beta propeller domain
FBA_3 PF08268 130 - 343 5.6e-10 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 203, 385
AccB7I CCANNNNNTGG 2 cut(s) 660, 1163
AccI GTMKAC 2 cut(s) 967, 1038
AccIII TCCGGA 1 cut(s) 874
AciI CCGC 2 cut(s) 314, 843
AclI AACGTT 1 cut(s) 570
AclWI GGATC 2 cut(s) 533, 614
AcsI RAATTY 2 cut(s) 473, 890
AfaI GTAC 7 cut(s) 455, 652, 731, 809, 887, 1124, 1145
AfiI CCNNNNNNNGG 4 cut(s) 323, 660, 849, 1163
AgsI TTSAA 6 cut(s) 321, 478, 503, 725, 736, 803
AjnI CCWGG 1 cut(s) 98
AloI GAACNNNNNNTCC 2 cut(s) 149, 181
AluBI AGCT 4 cut(s) 425, 1030, 1118, 1128
AluI AGCT 4 cut(s) 425, 1030, 1118, 1128
Alw26I GTCTC 2 cut(s) 614, 1010
AlwI GGATC 2 cut(s) 533, 614
AlwNI CAGNNNCTG 1 cut(s) 160
Ama87I CYCGRG 2 cut(s) 305, 488
Aor13HI TCCGGA 1 cut(s) 874
AoxI GGCC 1 cut(s) 710
ApoI RAATTY 2 cut(s) 473, 890
AspLEI GCGC 2 cut(s) 204, 386
AspS9I GGNCC 2 cut(s) 301, 910
AsuHPI GGTGA 2 cut(s) 143, 997
AvaI CYCGRG 2 cut(s) 305, 488
AvaII GGWCC 2 cut(s) 301, 910
BarI GAAGNNNNNNTAC 2 cut(s) 543, 575
BccI CCATC 5 cut(s) 25, 185, 260, 401, 995
BceAI ACGGC 1 cut(s) 598
BcgI CGANNNNNNTGC 4 cut(s) 66, 100, 917, 951
BciT130I CCWGG 1 cut(s) 100
BclI TGATCA 1 cut(s) 111
BcoDI GTCTC 2 cut(s) 614, 1010
BfaI CTAG 3 cut(s) 336, 422, 714
BglII AGATCT 1 cut(s) 1049
BmcAI AGTACT 1 cut(s) 809
Bme1390I CCNGG 1 cut(s) 100
Bme18I GGWCC 2 cut(s) 301, 910
BmeT110I CYCGRG 2 cut(s) 305, 488
BmgT120I GGNCC 2 cut(s) 301, 910
BmiI GGNNCC 1 cut(s) 873
BmrFI CCNGG 1 cut(s) 100
BmrI ACTGGG 2 cut(s) 118, 225
BmsI GCATC 4 cut(s) 96, 148, 424, 888
BmuI ACTGGG 2 cut(s) 118, 225
BsaAI YACGTR 1 cut(s) 1106
BsaI GGTCTC 1 cut(s) 1010
BsaWI WCCGGW 1 cut(s) 874
Bsc4I CCNNNNNNNGG 4 cut(s) 323, 660, 849, 1163
Bse1I ACTGG 6 cut(s) 124, 220, 755, 1147, 1157, 1211
Bse3DI GCAATG 2 cut(s) 1041, 1087
BseAI TCCGGA 1 cut(s) 874
BseBI CCWGG 1 cut(s) 100
BseGI GGATG 3 cut(s) 87, 177, 607
BseLI CCNNNNNNNGG 4 cut(s) 323, 660, 849, 1163
BseMI GCAATG 2 cut(s) 1041, 1087
BseNI ACTGG 6 cut(s) 124, 220, 755, 1147, 1157, 1211
Bsh1285I CGRYCG 1 cut(s) 850
BshFI GGCC 1 cut(s) 712
BsiEI CGRYCG 1 cut(s) 850
BsiHKCI CYCGRG 2 cut(s) 305, 488
BsiSI CCGG 1 cut(s) 875
BslFI GGGAC 2 cut(s) 105, 354
BslI CCNNNNNNNGG 4 cut(s) 323, 660, 849, 1163
BsmAI GTCTC 2 cut(s) 614, 1010
BsmBI CGTCTC 1 cut(s) 614
BsmFI GGGAC 2 cut(s) 105, 354
BsmI GAATGC 1 cut(s) 103
BsnI GGCC 1 cut(s) 712
Bso31I GGTCTC 1 cut(s) 1010
BsoBI CYCGRG 2 cut(s) 305, 488
Bsp13I TCCGGA 1 cut(s) 874
Bsp1407I TGTACA 2 cut(s) 453, 1122
Bsp143I GATC 8 cut(s) 111, 364, 538, 604, 619, 669, 847, 1049
BspACI CCGC 2 cut(s) 314, 843
BspANI GGCC 1 cut(s) 712
BspEI TCCGGA 1 cut(s) 874
BspHI TCATGA 1 cut(s) 376
BspLI GGNNCC 1 cut(s) 873
BspPI GGATC 2 cut(s) 533, 614
BspTNI GGTCTC 1 cut(s) 1010
BsrDI GCAATG 2 cut(s) 1041, 1087
BsrGI TGTACA 2 cut(s) 453, 1122
BsrI ACTGG 6 cut(s) 124, 220, 755, 1147, 1157, 1211
BssMI GATC 8 cut(s) 111, 364, 538, 604, 619, 669, 847, 1049
Bst2UI CCWGG 1 cut(s) 100
Bst4CI ACNGT 2 cut(s) 54, 919
Bst6I CTCTTC 3 cut(s) 21, 798, 1018
BstAUI TGTACA 2 cut(s) 453, 1122
BstBAI YACGTR 1 cut(s) 1106
BstC8I GCNNGC 1 cut(s) 587
BstDEI CTNAG 1 cut(s) 993
BstF5I GGATG 3 cut(s) 87, 177, 607
BstHHI GCGC 2 cut(s) 204, 386
BstKTI GATC 8 cut(s) 114, 367, 541, 607, 622, 672, 850, 1052
BstMAI GTCTC 2 cut(s) 614, 1010
BstMBI GATC 8 cut(s) 111, 364, 538, 604, 619, 669, 847, 1049
BstMCI CGRYCG 1 cut(s) 850
BstNI CCWGG 1 cut(s) 100
BstSCI CCNGG 1 cut(s) 98
BstSNI TACGTA 1 cut(s) 1106
BstX2I RGATCY 1 cut(s) 1049
BstYI RGATCY 1 cut(s) 1049
BsuRI GGCC 1 cut(s) 712
BtsCI GGATG 3 cut(s) 87, 177, 607
BtsI GCAGTG 1 cut(s) 933
BtsIMutI CAGTG 4 cut(s) 213, 528, 924, 933
Cac8I GCNNGC 1 cut(s) 587
CaiI CAGNNNCTG 1 cut(s) 160
CciI TCATGA 1 cut(s) 376
CfoI GCGC 2 cut(s) 204, 386
Cfr13I GGNCC 2 cut(s) 301, 910
CseI GACGC 1 cut(s) 179
Csp6I GTAC 7 cut(s) 454, 651, 730, 808, 886, 1123, 1144
CviAII CATG 5 cut(s) 377, 495, 514, 761, 902
CviJI RGCY 7 cut(s) 425, 534, 712, 1030, 1118, 1128, 1184
CviKI_1 RGCY 7 cut(s) 425, 534, 712, 1030, 1118, 1128, 1184
CviQI GTAC 7 cut(s) 454, 651, 730, 808, 886, 1123, 1144
DdeI CTNAG 1 cut(s) 993
DpnI GATC 8 cut(s) 113, 366, 540, 606, 621, 671, 849, 1051
DpnII GATC 8 cut(s) 111, 364, 538, 604, 619, 669, 847, 1049
DraI TTTAAA 1 cut(s) 330
Eam1104I CTCTTC 3 cut(s) 21, 798, 1018
EarI CTCTTC 3 cut(s) 21, 798, 1018
EciI GGCGGA 1 cut(s) 303
Eco105I TACGTA 1 cut(s) 1106
Eco31I GGTCTC 1 cut(s) 1010
Eco32I GATATC 1 cut(s) 295
Eco47I GGWCC 2 cut(s) 301, 910
Eco88I CYCGRG 2 cut(s) 305, 488
EcoO109I RGGNCCY 1 cut(s) 301
EcoRI GAATTC 1 cut(s) 473
EcoRII CCWGG 1 cut(s) 98
EcoRV GATATC 1 cut(s) 295
EcoT22I ATGCAT 1 cut(s) 903
Esp3I CGTCTC 1 cut(s) 614
FaeI CATG 5 cut(s) 380, 498, 517, 764, 905
FaqI GGGAC 2 cut(s) 105, 354
FatI CATG 5 cut(s) 376, 494, 513, 760, 901
FbaI TGATCA 1 cut(s) 111
FblI GTMKAC 2 cut(s) 967, 1038
FokI GGATG 3 cut(s) 74, 164, 614
FspBI CTAG 3 cut(s) 336, 422, 714
FspI TGCGCA 2 cut(s) 203, 385
GlaI GCGC 2 cut(s) 203, 385
HaeIII GGCC 1 cut(s) 712
HapII CCGG 1 cut(s) 875
HgaI GACGC 1 cut(s) 179
HhaI GCGC 2 cut(s) 204, 386
Hin1II CATG 5 cut(s) 380, 498, 517, 764, 905
Hin6I GCGC 2 cut(s) 202, 384
HinP1I GCGC 2 cut(s) 202, 384
HincII GTYRAC 3 cut(s) 568, 968, 1039
HindII GTYRAC 3 cut(s) 568, 968, 1039
HinfI GANTC 4 cut(s) 491, 676, 929, 1087
HpaI GTTAAC 1 cut(s) 568
HpaII CCGG 1 cut(s) 875
HphI GGTGA 2 cut(s) 143, 997
Hpy166II GTNNAC 6 cut(s) 568, 640, 730, 968, 1039, 1109
Hpy188I TCNGA 7 cut(s) 63, 111, 354, 550, 852, 860, 897
Hpy188III TCNNGA 7 cut(s) 377, 488, 503, 673, 686, 875, 1216
Hpy8I GTNNAC 6 cut(s) 568, 640, 730, 968, 1039, 1109
Hpy99I CGWCG 2 cut(s) 372, 1040
HpyAV CCTTC 4 cut(s) 293, 327, 509, 766
HpyCH4III ACNGT 2 cut(s) 54, 919
HpyCH4IV ACGT 4 cut(s) 370, 570, 701, 1105
HpyCH4V TGCA 5 cut(s) 15, 87, 260, 437, 901
HpyF3I CTNAG 1 cut(s) 993
HpySE526I ACGT 4 cut(s) 370, 570, 701, 1105
Hsp92II CATG 5 cut(s) 380, 498, 517, 764, 905
HspAI GCGC 2 cut(s) 202, 384
Kpn2I TCCGGA 1 cut(s) 874
Ksp22I TGATCA 1 cut(s) 111
KspAI GTTAAC 1 cut(s) 568
Kzo9I GATC 8 cut(s) 111, 364, 538, 604, 619, 669, 847, 1049
LweI GCATC 4 cut(s) 96, 148, 424, 888
MaeI CTAG 3 cut(s) 336, 422, 714
MaeII ACGT 4 cut(s) 370, 570, 701, 1105
MaeIII GTNAC 2 cut(s) 578, 746
MalI GATC 8 cut(s) 113, 366, 540, 606, 621, 671, 849, 1051
MboI GATC 8 cut(s) 111, 364, 538, 604, 619, 669, 847, 1049
MboII GAAGA 6 cut(s) 38, 242, 476, 563, 815, 1005
MfeI CAATTG 2 cut(s) 655, 825
MflI RGATCY 1 cut(s) 1049
MluCI AATT 7 cut(s) 228, 344, 473, 655, 742, 825, 890
MlyI GAGTC 1 cut(s) 500
MmeI TCCRAC 1 cut(s) 641
MnlI CCTC 5 cut(s) 178, 191, 217, 314, 1212
Mph1103I ATGCAT 1 cut(s) 903
MroI TCCGGA 1 cut(s) 874
MseI TTAA 6 cut(s) 81, 185, 246, 329, 567, 1023
MslI CAYNNNNRTG 1 cut(s) 405
MspI CCGG 1 cut(s) 875
MspR9I CCNGG 1 cut(s) 100
MunI CAATTG 2 cut(s) 655, 825
Mva1269I GAATGC 1 cut(s) 103
MvaI CCWGG 1 cut(s) 100
NdeII GATC 8 cut(s) 111, 364, 538, 604, 619, 669, 847, 1049
NlaIII CATG 5 cut(s) 380, 498, 517, 764, 905
NlaIV GGNNCC 1 cut(s) 873
NsbI TGCGCA 2 cut(s) 203, 385
NsiI ATGCAT 1 cut(s) 903
PaeR7I CTCGAG 1 cut(s) 305
PagI TCATGA 1 cut(s) 376
PcsI WCGNNNNNNNCGW 1 cut(s) 856
PctI GAATGC 1 cut(s) 103
PfeI GAWTC 3 cut(s) 676, 929, 1087
PflMI CCANNNNNTGG 2 cut(s) 660, 1163
Ple19I CGATCG 1 cut(s) 850
PleI GAGTC 1 cut(s) 499
PpsI GAGTC 1 cut(s) 499
Ppu21I YACGTR 1 cut(s) 1106
PpuMI RGGWCCY 1 cut(s) 301
Psp1406I AACGTT 1 cut(s) 570
Psp5II RGGWCCY 1 cut(s) 301
Psp6I CCWGG 1 cut(s) 98
PspGI CCWGG 1 cut(s) 98
PspN4I GGNNCC 1 cut(s) 873
PspPI GGNCC 2 cut(s) 301, 910
PspPPI RGGWCCY 1 cut(s) 301
PspXI VCTCGAGB 1 cut(s) 305
PstNI CAGNNNCTG 1 cut(s) 160
PsuI RGATCY 1 cut(s) 1049
PvuI CGATCG 1 cut(s) 850
RsaI GTAC 7 cut(s) 455, 652, 731, 809, 887, 1124, 1145
RsaNI GTAC 7 cut(s) 454, 651, 730, 808, 886, 1123, 1144
RseI CAYNNNNRTG 1 cut(s) 405
SalI GTCGAC 2 cut(s) 966, 1037
SaqAI TTAA 6 cut(s) 81, 185, 246, 329, 567, 1023
Sau3AI GATC 8 cut(s) 111, 364, 538, 604, 619, 669, 847, 1049
Sau96I GGNCC 2 cut(s) 301, 910
ScaI AGTACT 1 cut(s) 809
SchI GAGTC 1 cut(s) 500
ScrFI CCNGG 1 cut(s) 100
SfaNI GCATC 4 cut(s) 96, 148, 424, 888
Sfr274I CTCGAG 1 cut(s) 305
SinI GGWCC 2 cut(s) 301, 910
SlaI CTCGAG 1 cut(s) 305
SmiMI CAYNNNNRTG 1 cut(s) 405
SmlI CTYRAG 1 cut(s) 305
SmoI CTYRAG 1 cut(s) 305
SnaBI TACGTA 1 cut(s) 1106
Sse9I AATT 7 cut(s) 228, 344, 473, 655, 742, 825, 890
SsiI CCGC 2 cut(s) 314, 843
SspI AATATT 1 cut(s) 593
SspMI CTAG 3 cut(s) 336, 422, 714
StyD4I CCNGG 1 cut(s) 98
TaaI ACNGT 2 cut(s) 54, 919
TaiI ACGT 4 cut(s) 373, 573, 704, 1108
TaqI TCGA 4 cut(s) 306, 367, 967, 1038
TasI AATT 7 cut(s) 228, 344, 473, 655, 742, 825, 890
TatI WGTACW 4 cut(s) 453, 729, 807, 1122
TfiI GAWTC 3 cut(s) 676, 929, 1087
Tru1I TTAA 6 cut(s) 81, 185, 246, 329, 567, 1023
Tru9I TTAA 6 cut(s) 81, 185, 246, 329, 567, 1023
TscAI CASTG 4 cut(s) 220, 528, 924, 940
TspDTI ATGAA 3 cut(s) 118, 777, 1090
TspGWI ACGGA 1 cut(s) 1024
TspRI CASTG 4 cut(s) 220, 528, 924, 940
Van91I CCANNNNNTGG 2 cut(s) 660, 1163
VpaK11BI GGWCC 2 cut(s) 301, 910
XapI RAATTY 2 cut(s) 473, 890
XcmI CCANNNNNNNNNTGG 1 cut(s) 1068
XhoI CTCGAG 1 cut(s) 305
XmiI GTMKAC 2 cut(s) 967, 1038
XspI CTAG 3 cut(s) 336, 422, 714
ZrmI AGTACT 1 cut(s) 809
Zsp2I ATGCAT 1 cut(s) 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.