Rw3G005790

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
5081814 .. 5083046
1233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G005790.1

Sequence Viewer

Length: 1233 bp
ATGGTAGGGTTATGCCAGATGTCTGAAGAGATAATCGTGCAAATGCTATCAAGGACGCCTCCTAAATCTCTAATGCGATTCAAGTGTATCCACAAGTCATGGTATTATATGATCAATGATCCACAATTTGCAGCCAAACATCTTCACTTTTACAACAATCCATCTTCCTCCACTGCCTTCCTCGTTAAGCGTCCTGTCATCCTCAGAAGTGAAACGAGCAATGAGAACGTTGTACTTTCATATCTTCGTCTAGAAAATTATAGTAATGGTGACGATGAAGACCTTCATTTCATAGTTGAGGACCTCATTTTCCCACCTTTTAAGGGTCTAAGGACTAGGGGCCAATTTATTGAGCTCCCTGGACGTGATGATTCTTTGTATATCATTAGTCATTGTGATGGCATTATTTTTCTAACTATGTATGCCGGCGACCTTGTTTTGTACAACCCAGCAATCAAAGAATTCAAGATTATTCCGGCGTCATGTTGTCAAGATTGTTTCTGGAGCTTGGTGGGATTCGGATATGATCAGAGATCCAAAGATTACATTATTCTAGAAATTGCGTGTTATGGTGAGACAAATTATGACCATCCTCAGCGTCTCATTGTTGATCCTCCTAAAGCTGCAATTTATACACTAGGCATTGATTCTTGGAGAGAGATCAAGACTGATTACTTACAAACTGAAGATACCTACTTTTGGCCTACAGCATTTGATTTGTATTCGAAGGGAATTTTCTATTGGTTTGGTTATGAGGAAAAGAAGGAGTTCTTGGATGACATGGAAAGATGTGAGGAGACAAACAAGCAAGTGATGATTTTGTATGATACCAGAGATGAGCTATTTCATATTGCAATGCTTCCAGATAGTTTCAATGAGCCTGCATGCGGCGTACATGATATTCATCTTACATTGTTAGATAAGTCAATTGCTCTATACGGTTTTAGCAATTTTGAATCGATTCATTCCATTCAAATATGGGTGACAGATGACATTCGAGAGGAATCTTGGACAAAATACTTGTCCATAGAGCCGGTAGAAGCTGTTCGGAGGTCATTGGCCTTTTGGAAGATCAACGAGGTTCTTATGATTGCCAAAGATGGACGTGTAGTTCTCTACAACCTCGTTACCGGAAAGCTCAAGTATTTTCCTATTTATGGCCTGCACCTAGGAGATGATATTCAAGGCATTGTTTGTATGGGTAGTATAGTTTCCGTAATGAGAAAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

410

Amino Acids

47.76

Weight (kDa)

5.11

Isoelectric Point (pI)

43.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 120 - 350 5.2e-11 F-box associated beta propeller domain
FBA_1 PF07734 123 - 372 9.7e-24 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 888
AclI AACGTT 1 cut(s) 228
AclWI GGATC 3 cut(s) 113, 528, 605
AcsI RAATTY 2 cut(s) 461, 732
AcuI CTGAAG 2 cut(s) 45, 705
AcyI GRCGYC 2 cut(s) 56, 479
AfaI GTAC 3 cut(s) 234, 443, 894
AfiI CCNNNNNNNGG 4 cut(s) 323, 699, 887, 1157
AflIII ACRYGT 1 cut(s) 1105
AgsI TTSAA 6 cut(s) 82, 466, 874, 956, 974, 1184
AjiI CACGTC 2 cut(s) 365, 1106
AjnI CCWGG 1 cut(s) 358
AjuI GAANNNNNNNTTGG 4 cut(s) 724, 755, 756, 787
AloI GAACNNNNNNTCC 2 cut(s) 1095, 1127
AluBI AGCT 6 cut(s) 355, 507, 623, 841, 1043, 1138
AluI AGCT 6 cut(s) 355, 507, 623, 841, 1043, 1138
Alw21I GWGCWC 1 cut(s) 357
Alw26I GTCTC 3 cut(s) 569, 605, 791
AlwI GGATC 3 cut(s) 113, 528, 605
AoxI GGCC 4 cut(s) 340, 701, 1059, 1159
ApeKI GCWGC 2 cut(s) 131, 623
ApoI RAATTY 2 cut(s) 461, 732
ArsI GACNNNNNNTTYG 2 cut(s) 1007, 1039
Asp700I GAANNNNTTC 4 cut(s) 282, 767, 960, 1044
AspA2I CCTAGG 1 cut(s) 1168
AspS9I GGNCC 2 cut(s) 301, 340
AsuHPI GGTGA 3 cut(s) 281, 584, 994
AsuII TTCGAA 1 cut(s) 725
AvaII GGWCC 1 cut(s) 301
AvrII CCTAGG 1 cut(s) 1168
BanII GRGCYC 1 cut(s) 357
BbsI GAAGAC 1 cut(s) 285
Bbv12I GWGCWC 1 cut(s) 357
BbvCI CCTCAGC 1 cut(s) 594
BbvI GCAGC 2 cut(s) 143, 610
BccI CCATC 4 cut(s) 169, 392, 597, 1094
BciT130I CCWGG 1 cut(s) 360
BciVI GTATCC 1 cut(s) 98
BclI TGATCA 2 cut(s) 111, 526
BcoDI GTCTC 3 cut(s) 569, 605, 791
BfaI CTAG 5 cut(s) 251, 336, 554, 638, 1169
BfmI CTRYAG 1 cut(s) 705
BfuI GTATCC 1 cut(s) 98
BisI GCNGC 3 cut(s) 132, 624, 889
BlnI CCTAGG 1 cut(s) 1168
BlsI GCNGC 3 cut(s) 133, 625, 890
Bme1390I CCNGG 1 cut(s) 360
Bme18I GGWCC 1 cut(s) 301
BmgBI CACGTC 2 cut(s) 365, 1106
BmgT120I GGNCC 2 cut(s) 301, 340
BmiI GGNNCC 1 cut(s) 341
BmrFI CCNGG 1 cut(s) 360
BpiI GAAGAC 1 cut(s) 285
BpmI CTGGAG 1 cut(s) 523
Bpu10I CCTNAGC 1 cut(s) 594
Bpu14I TTCGAA 1 cut(s) 725
BpuEI CTTGAG 1 cut(s) 1124
Bsa29I ATCGAT 1 cut(s) 959
BsaBI GATNNNNATC 1 cut(s) 903
BsaHI GRCGYC 2 cut(s) 56, 479
BsaJI CCNNGG 2 cut(s) 358, 1168
BsaWI WCCGGW 1 cut(s) 1130
Bsc4I CCNNNNNNNGG 4 cut(s) 323, 699, 887, 1157
Bse118I RCCGGY 2 cut(s) 425, 1033
Bse3DI GCAATG 2 cut(s) 226, 861
Bse8I GATNNNNATC 1 cut(s) 903
BseBI CCWGG 1 cut(s) 360
BseCI ATCGAT 1 cut(s) 959
BseDI CCNNGG 2 cut(s) 358, 1168
BseGI GGATG 3 cut(s) 198, 589, 781
BseJI GATNNNNATC 1 cut(s) 903
BseLI CCNNNNNNNGG 4 cut(s) 323, 699, 887, 1157
BseMI GCAATG 2 cut(s) 226, 861
BseMII CTCAG 2 cut(s) 217, 608
BseRI GAGGAG 1 cut(s) 809
BseXI GCAGC 2 cut(s) 143, 610
BseYI CCCAGC 1 cut(s) 448
BsgI GTGCAG 1 cut(s) 1148
BshFI GGCC 4 cut(s) 342, 703, 1061, 1161
BshVI ATCGAT 1 cut(s) 959
BsiHKAI GWGCWC 1 cut(s) 357
BsiSI CCGG 4 cut(s) 426, 476, 1034, 1131
BslI CCNNNNNNNGG 4 cut(s) 323, 699, 887, 1157
BsmAI GTCTC 3 cut(s) 569, 605, 791
BsmBI CGTCTC 1 cut(s) 605
BsnI GGCC 4 cut(s) 342, 703, 1061, 1161
Bsp119I TTCGAA 1 cut(s) 725
Bsp1286I GDGCHC 1 cut(s) 357
Bsp1407I TGTACA 1 cut(s) 441
Bsp143I GATC 7 cut(s) 111, 118, 526, 533, 610, 660, 1071
BspACI CCGC 1 cut(s) 888
BspANI GGCC 4 cut(s) 342, 703, 1061, 1161
BspCNI CTCAG 2 cut(s) 216, 607
BspDI ATCGAT 1 cut(s) 959
BspLI GGNNCC 1 cut(s) 341
BspPI GGATC 3 cut(s) 113, 528, 605
BspT104I TTCGAA 1 cut(s) 725
BsrDI GCAATG 2 cut(s) 226, 861
BsrFI RCCGGY 2 cut(s) 425, 1033
BsrGI TGTACA 1 cut(s) 441
BssAI RCCGGY 2 cut(s) 425, 1033
BssECI CCNNGG 2 cut(s) 358, 1168
BssMI GATC 7 cut(s) 111, 118, 526, 533, 610, 660, 1071
BssNI GRCGYC 2 cut(s) 56, 479
BssT1I CCWWGG 1 cut(s) 1168
Bst2UI CCWGG 1 cut(s) 360
Bst4CI ACNGT 1 cut(s) 941
Bst6I CTCTTC 1 cut(s) 21
BstACI GRCGYC 2 cut(s) 56, 479
BstAUI TGTACA 1 cut(s) 441
BstBI TTCGAA 1 cut(s) 725
BstC8I GCNNGC 4 cut(s) 427, 882, 886, 1163
BstDEI CTNAG 3 cut(s) 203, 329, 594
BstF5I GGATG 3 cut(s) 198, 589, 781
BstKTI GATC 7 cut(s) 114, 121, 529, 536, 613, 663, 1074
BstMAI GTCTC 3 cut(s) 569, 605, 791
BstMBI GATC 7 cut(s) 111, 118, 526, 533, 610, 660, 1071
BstNI CCWGG 1 cut(s) 360
BstNSI RCATGY 1 cut(s) 888
BstSCI CCNGG 1 cut(s) 358
BstSFI CTRYAG 1 cut(s) 705
BstV1I GCAGC 2 cut(s) 143, 610
BstV2I GAAGAC 1 cut(s) 285
BstX2I RGATCY 1 cut(s) 533
BstYI RGATCY 1 cut(s) 533
Bsu15I ATCGAT 1 cut(s) 959
BsuI GTATCC 1 cut(s) 98
BsuRI GGCC 4 cut(s) 342, 703, 1061, 1161
BsuTUI ATCGAT 1 cut(s) 959
BtrI CACGTC 2 cut(s) 365, 1106
BtsCI GGATG 3 cut(s) 198, 589, 781
BtsI GCAGTG 1 cut(s) 171
BtsIMutI CAGTG 1 cut(s) 171
Cac8I GCNNGC 4 cut(s) 427, 882, 886, 1163
Cfr10I RCCGGY 2 cut(s) 425, 1033
Cfr13I GGNCC 2 cut(s) 301, 340
ClaI ATCGAT 1 cut(s) 959
CseI GACGC 4 cut(s) 64, 179, 468, 587
Csp6I GTAC 3 cut(s) 233, 442, 893
CviAII CATG 5 cut(s) 99, 483, 781, 885, 896
CviQI GTAC 3 cut(s) 233, 442, 893
DdeI CTNAG 3 cut(s) 203, 329, 594
DpnI GATC 7 cut(s) 113, 120, 528, 535, 612, 662, 1073
DpnII GATC 7 cut(s) 111, 118, 526, 533, 610, 660, 1071
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
Ecl136II GAGCTC 1 cut(s) 355
Eco130I CCWWGG 1 cut(s) 1168
Eco24I GRGCYC 1 cut(s) 357
Eco47I GGWCC 1 cut(s) 301
Eco53kI GAGCTC 1 cut(s) 355
Eco57I CTGAAG 2 cut(s) 45, 705
EcoICRI GAGCTC 1 cut(s) 355
EcoO109I RGGNCCY 1 cut(s) 301
EcoRI GAATTC 1 cut(s) 461
EcoRII CCWGG 1 cut(s) 358
EcoT14I CCWWGG 1 cut(s) 1168
EcoT38I GRGCYC 1 cut(s) 357
ErhI CCWWGG 1 cut(s) 1168
Esp3I CGTCTC 1 cut(s) 605
FaeI CATG 5 cut(s) 102, 486, 784, 888, 899
FalI AAGNNNNNCTT 2 cut(s) 755, 787
FatI CATG 5 cut(s) 98, 482, 780, 884, 895
FbaI TGATCA 2 cut(s) 111, 526
Fnu4HI GCNGC 3 cut(s) 132, 624, 889
FokI GGATG 3 cut(s) 185, 576, 788
FriOI GRGCYC 1 cut(s) 357
Fsp4HI GCNGC 3 cut(s) 132, 624, 889
FspBI CTAG 5 cut(s) 251, 336, 554, 638, 1169
GluI GCNGC 3 cut(s) 132, 624, 889
GsaI CCCAGC 1 cut(s) 452
GsuI CTGGAG 1 cut(s) 523
HaeIII GGCC 4 cut(s) 342, 703, 1061, 1161
HapII CCGG 4 cut(s) 426, 476, 1034, 1131
HgaI GACGC 4 cut(s) 64, 179, 468, 587
Hin1I GRCGYC 2 cut(s) 56, 479
Hin1II CATG 5 cut(s) 102, 486, 784, 888, 899
HinfI GANTC 7 cut(s) 78, 371, 516, 647, 956, 961, 1004
HpaII CCGG 4 cut(s) 426, 476, 1034, 1131
HphI GGTGA 3 cut(s) 281, 584, 994
Hpy188I TCNGA 5 cut(s) 25, 206, 521, 531, 1050
Hpy188III TCNNGA 8 cut(s) 251, 466, 491, 502, 554, 664, 863, 998
HpyAV CCTTC 4 cut(s) 187, 293, 721, 757
HpyCH4III ACNGT 1 cut(s) 941
HpyCH4IV ACGT 3 cut(s) 228, 364, 1105
HpyCH4V TGCA 6 cut(s) 40, 131, 626, 854, 884, 1165
HpyF3I CTNAG 3 cut(s) 203, 329, 594
HpySE526I ACGT 3 cut(s) 228, 364, 1105
Hsp92I GRCGYC 2 cut(s) 56, 479
Hsp92II CATG 5 cut(s) 102, 486, 784, 888, 899
KroI GCCGGC 1 cut(s) 425
KroNI GCCGGC 1 cut(s) 427
Ksp22I TGATCA 2 cut(s) 111, 526
Kzo9I GATC 7 cut(s) 111, 118, 526, 533, 610, 660, 1071
LmnI GCTCC 2 cut(s) 360, 504
Lsp1109I GCAGC 2 cut(s) 143, 610
MaeI CTAG 5 cut(s) 251, 336, 554, 638, 1169
MaeII ACGT 3 cut(s) 228, 364, 1105
MaeIII GTNAC 3 cut(s) 269, 982, 1126
MalI GATC 7 cut(s) 113, 120, 528, 535, 612, 662, 1073
MboI GATC 7 cut(s) 111, 118, 526, 533, 610, 660, 1071
MboII GAAGA 7 cut(s) 38, 134, 156, 236, 290, 698, 1081
MfeI CAATTG 1 cut(s) 927
MflI RGATCY 1 cut(s) 533
MhlI GDGCHC 1 cut(s) 357
MroNI GCCGGC 1 cut(s) 425
MroXI GAANNNNTTC 4 cut(s) 282, 767, 960, 1044
MseI TTAA 2 cut(s) 186, 321
MslI CAYNNNNRTG 1 cut(s) 396
MspI CCGG 4 cut(s) 426, 476, 1034, 1131
MspR9I CCNGG 1 cut(s) 360
MunI CAATTG 1 cut(s) 927
MvaI CCWGG 1 cut(s) 360
NaeI GCCGGC 1 cut(s) 427
NdeII GATC 7 cut(s) 111, 118, 526, 533, 610, 660, 1071
NgoMIV GCCGGC 1 cut(s) 425
NlaIII CATG 5 cut(s) 102, 486, 784, 888, 899
NlaIV GGNNCC 1 cut(s) 341
NmuCI GTSAC 2 cut(s) 269, 982
NspI RCATGY 1 cut(s) 888
NspV TTCGAA 1 cut(s) 725
PaeI GCATGC 1 cut(s) 888
PdiI GCCGGC 1 cut(s) 427
PdmI GAANNNNTTC 4 cut(s) 282, 767, 960, 1044
PfeI GAWTC 7 cut(s) 78, 371, 516, 647, 956, 961, 1004
PkrI GCNGC 3 cut(s) 133, 625, 890
PpuMI RGGWCCY 1 cut(s) 301
Psp124BI GAGCTC 1 cut(s) 357
Psp1406I AACGTT 1 cut(s) 228
Psp5II RGGWCCY 1 cut(s) 301
Psp6I CCWGG 1 cut(s) 358
PspFI CCCAGC 1 cut(s) 448
PspGI CCWGG 1 cut(s) 358
PspN4I GGNNCC 1 cut(s) 341
PspPI GGNCC 2 cut(s) 301, 340
PspPPI RGGWCCY 1 cut(s) 301
PsrI GAACNNNNNNTAC 2 cut(s) 1029, 1061
PsuI RGATCY 1 cut(s) 533
RsaI GTAC 3 cut(s) 234, 443, 894
RsaNI GTAC 3 cut(s) 233, 442, 893
RseI CAYNNNNRTG 1 cut(s) 396
SacI GAGCTC 1 cut(s) 357
SaqAI TTAA 2 cut(s) 186, 321
SatI GCNGC 3 cut(s) 132, 624, 889
Sau3AI GATC 7 cut(s) 111, 118, 526, 533, 610, 660, 1071
Sau96I GGNCC 2 cut(s) 301, 340
ScrFI CCNGG 1 cut(s) 360
SduI GDGCHC 1 cut(s) 357
SfcI CTRYAG 1 cut(s) 705
SfuI TTCGAA 1 cut(s) 725
SinI GGWCC 1 cut(s) 301
SmiMI CAYNNNNRTG 1 cut(s) 396
SmlI CTYRAG 1 cut(s) 1139
SmoI CTYRAG 1 cut(s) 1139
SphI GCATGC 1 cut(s) 888
SsiI CCGC 1 cut(s) 888
SspMI CTAG 5 cut(s) 251, 336, 554, 638, 1169
SstI GAGCTC 1 cut(s) 357
StyD4I CCNGG 1 cut(s) 358
StyI CCWWGG 1 cut(s) 1168
TaaI ACNGT 1 cut(s) 941
TaiI ACGT 3 cut(s) 231, 367, 1108
TaqI TCGA 3 cut(s) 725, 959, 997
TatI WGTACW 2 cut(s) 232, 441
TauI GCSGC 1 cut(s) 891
TfiI GAWTC 7 cut(s) 78, 371, 516, 647, 956, 961, 1004
Tru1I TTAA 2 cut(s) 186, 321
Tru9I TTAA 2 cut(s) 186, 321
TscAI CASTG 1 cut(s) 178
TseFI GTSAC 2 cut(s) 269, 982
TseI GCWGC 2 cut(s) 131, 623
Tsp45I GTSAC 2 cut(s) 269, 982
TspDTI ATGAA 7 cut(s) 228, 275, 280, 291, 836, 893, 953
TspGWI ACGGA 1 cut(s) 1204
TspRI CASTG 1 cut(s) 178
VpaK11BI GGWCC 1 cut(s) 301
XapI RAATTY 2 cut(s) 461, 732
XbaI TCTAGA 2 cut(s) 250, 553
XceI RCATGY 1 cut(s) 888
XmaJI CCTAGG 1 cut(s) 1168
XmnI GAANNNNTTC 4 cut(s) 282, 767, 960, 1044
XspI CTAG 5 cut(s) 251, 336, 554, 638, 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.