Rw3G005700

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
4775159 .. 4776382
1224 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G005700.1

Sequence Viewer

Length: 1224 bp
ATGGCAGAGTTTTGCAGATTGCCGGAAGAGATGACCATGCAAATCCTATCAAGACTGCCTCCCGAATCTCTTATGCGATTCAAGGGCGTCCACAAATCCTGGTATACTATGATCAACAATCCCAAATTCATAGCCAAACACCTTTCCAATTCCATGCCTAACCATTCCTCCACTTGTGTCCTTTTCAAGCTATCGGTCCTCAAGAACAACAACACAAGAGACAATGACGAGAAGGAAACTGTATTCTCGTTGCTTACATTTTATAATGATAATGATGATCAGAAGGAGCATATCATTCATTATGTTGGCGATGATATTACGAAGAATCACTTTGTTGGGCTGAAGACCAAGGATCTAGAATCTGTATGGATTATAGGCCATTGTGATGGAATTATTTGCCTAGCTAATTCTAGTGACGTAATTTTATGGAATCCAGCGATTAGGGAATTCAAGCTTCTTAACCTCGAGCCTTATCCAGATCAGGTCATGACTTCTTTTGGCTTTGGTTATGATCCAAAGTCAAAAGCTTACAAGGTTGTTAACGTTGGAAAGCCTGGTGAGGAAGAATACGGTGATGGTCATCTCCTTAATAATCCTCCCATTGTCCAGGTATACACCTTAGGTACTAACTCTTGGAGAGAGATCAAGACCGGCTCCTTGGAAACAGAAACTACGAATATGTGGCCCGAGGAATTCGATCTGTACTTTAAGGGATTTTGTTATTGGAGGGGAAGGGAGCAAATAAAGGAATTCGACAATTTTTGTGACAGAAATGAGGAGGAATATGTTCGGCAATTAATCATTTCGTTTGATACGGTTGATGAGGTATTTCATCATATATTGTTTCCGGACAGTTTATACGAGTCATTTGCGTGTTGGTATTTTAATATGAACGTTATAGTTTGGAATGAATCAGTTGCTCTTTTCGGCATGGATTATGGTATTTACGAAGATTATTCACGGGTATTATGGGTGATGGAAGACTTCGGTGGAGTAGTTAAAGGCTCCTGGATAAAGCAATTCACCTTTGGGACAGCCGCAGGACTTGAGAAACCATTGCAATTTTGGAATAGGGATGAGATTCTTTTGGTTTCCGAGGGGCGTTTAGTCTCGTGCAACATCGATACTGAAAAGCTTAAGTATCTCCCCATTCCTAACATGGATTTTGATAATTTGGAAGCTGCTGTTTATGTTAGTAGTGTAGTTGCGATTTTGGGAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

407

Amino Acids

47.2

Weight (kDa)

4.86

Isoelectric Point (pI)

34.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 4 - 47 1.6e-08 F-box-like
F-box PF00646 4 - 44 2.3e-08 F-box domain
FBA_3 PF08268 106 - 341 5.1e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 264
AccI GTMKAC 2 cut(s) 104, 612
AccIII TCCGGA 1 cut(s) 847
AciI CCGC 1 cut(s) 1038
AclI AACGTT 2 cut(s) 543, 894
AclWI GGATC 2 cut(s) 360, 506
AcsI RAATTY 4 cut(s) 125, 446, 692, 749
AcuI CTGAAG 1 cut(s) 362
AcyI GRCGYC 1 cut(s) 87
AfaI GTAC 2 cut(s) 625, 704
AflII CTTAAG 1 cut(s) 1136
AgsI TTSAA 3 cut(s) 82, 187, 451
AjnI CCWGG 4 cut(s) 98, 553, 606, 1007
AluBI AGCT 7 cut(s) 190, 404, 454, 527, 1135, 1181, 1221
AluI AGCT 7 cut(s) 190, 404, 454, 527, 1135, 1181, 1221
Alw26I GTCTC 2 cut(s) 213, 1114
AlwI GGATC 2 cut(s) 360, 506
Ama87I CYCGRG 2 cut(s) 464, 686
Aor13HI TCCGGA 1 cut(s) 847
AoxI GGCC 2 cut(s) 376, 683
ApeKI GCWGC 1 cut(s) 1181
ApoI RAATTY 4 cut(s) 125, 446, 692, 749
AseI ATTAAT 1 cut(s) 797
Asp700I GAANNNNTTC 1 cut(s) 786
AspS9I GGNCC 2 cut(s) 196, 684
AsuHPI GGTGA 4 cut(s) 569, 584, 985, 1015
AvaI CYCGRG 2 cut(s) 464, 686
AvaII GGWCC 1 cut(s) 196
AxyI CCTNAGG 1 cut(s) 619
BauI CACGAG 1 cut(s) 1111
BbsI GAAGAC 2 cut(s) 350, 987
BbvI GCAGC 1 cut(s) 1168
BccI CCATC 3 cut(s) 380, 569, 970
BcgI CGANNNNNNTGC 2 cut(s) 851, 885
BciT130I CCWGG 4 cut(s) 100, 555, 608, 1009
BclI TGATCA 2 cut(s) 111, 277
BcoDI GTCTC 2 cut(s) 213, 1114
BfaI CTAG 4 cut(s) 356, 401, 411, 1222
BfrI CTTAAG 1 cut(s) 1136
BisI GCNGC 2 cut(s) 1038, 1182
BlsI GCNGC 2 cut(s) 1039, 1183
Bme1390I CCNGG 4 cut(s) 100, 555, 608, 1009
Bme18I GGWCC 1 cut(s) 196
BmeT110I CYCGRG 2 cut(s) 464, 686
BmgT120I GGNCC 2 cut(s) 196, 684
BmiI GGNNCC 2 cut(s) 655, 1006
BmrFI CCNGG 4 cut(s) 100, 555, 608, 1009
BpiI GAAGAC 2 cut(s) 350, 987
BpuEI CTTGAG 2 cut(s) 185, 1067
Bsa29I ATCGAT 1 cut(s) 1122
BsaBI GATNNNNATC 1 cut(s) 579
BsaHI GRCGYC 1 cut(s) 87
BsaJI CCNNGG 4 cut(s) 348, 657, 687, 1095
BsaWI WCCGGW 1 cut(s) 847
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bse118I RCCGGY 1 cut(s) 650
Bse21I CCTNAGG 1 cut(s) 619
Bse3DI GCAATG 1 cut(s) 1055
Bse8I GATNNNNATC 1 cut(s) 579
BseAI TCCGGA 1 cut(s) 847
BseBI CCWGG 4 cut(s) 100, 555, 608, 1009
BseCI ATCGAT 1 cut(s) 1122
BseDI CCNNGG 4 cut(s) 348, 657, 687, 1095
BseGI GGATG 1 cut(s) 1081
BseJI GATNNNNATC 1 cut(s) 579
BseMI GCAATG 1 cut(s) 1055
BseRI GAGGAG 1 cut(s) 791
BseXI GCAGC 1 cut(s) 1168
BshFI GGCC 2 cut(s) 378, 685
BshVI ATCGAT 1 cut(s) 1122
BsiHKCI CYCGRG 2 cut(s) 464, 686
BsiSI CCGG 3 cut(s) 23, 651, 848
BslFI GGGAC 1 cut(s) 1045
BsmAI GTCTC 2 cut(s) 213, 1114
BsmFI GGGAC 1 cut(s) 1045
BsnI GGCC 2 cut(s) 378, 685
BsoBI CYCGRG 2 cut(s) 464, 686
Bsp13I TCCGGA 1 cut(s) 847
Bsp143I GATC 7 cut(s) 111, 277, 352, 478, 511, 642, 697
BspACI CCGC 1 cut(s) 1038
BspANI GGCC 2 cut(s) 378, 685
BspDI ATCGAT 1 cut(s) 1122
BspEI TCCGGA 1 cut(s) 847
BspHI TCATGA 1 cut(s) 486
BspLI GGNNCC 2 cut(s) 655, 1006
BspPI GGATC 2 cut(s) 360, 506
BspTI CTTAAG 1 cut(s) 1136
BsrDI GCAATG 1 cut(s) 1055
BsrFI RCCGGY 1 cut(s) 650
BssAI RCCGGY 1 cut(s) 650
BssECI CCNNGG 4 cut(s) 348, 657, 687, 1095
BssMI GATC 7 cut(s) 111, 277, 352, 478, 511, 642, 697
BssNAI GTATAC 2 cut(s) 105, 613
BssNI GRCGYC 1 cut(s) 87
BssSI CACGAG 1 cut(s) 1111
BssT1I CCWWGG 2 cut(s) 348, 657
Bst1107I GTATAC 2 cut(s) 105, 613
Bst2BI CACGAG 1 cut(s) 1111
Bst2UI CCWGG 4 cut(s) 100, 555, 608, 1009
Bst4CI ACNGT 4 cut(s) 241, 572, 817, 854
Bst6I CTCTTC 1 cut(s) 21
BstACI GRCGYC 1 cut(s) 87
BstAFI CTTAAG 1 cut(s) 1136
BstDEI CTNAG 1 cut(s) 619
BstF5I GGATG 1 cut(s) 1081
BstKTI GATC 7 cut(s) 114, 280, 355, 481, 514, 645, 700
BstMAI GTCTC 2 cut(s) 213, 1114
BstMBI GATC 7 cut(s) 111, 277, 352, 478, 511, 642, 697
BstNI CCWGG 4 cut(s) 100, 555, 608, 1009
BstSCI CCNGG 4 cut(s) 98, 553, 606, 1007
BstV1I GCAGC 1 cut(s) 1168
BstV2I GAAGAC 2 cut(s) 350, 987
BstX2I RGATCY 1 cut(s) 352
BstXI CCANNNNNNTGG 1 cut(s) 386
BstYI RGATCY 1 cut(s) 352
BstZ17I GTATAC 2 cut(s) 105, 613
Bsu15I ATCGAT 1 cut(s) 1122
Bsu36I CCTNAGG 1 cut(s) 619
BsuRI GGCC 2 cut(s) 378, 685
BsuTUI ATCGAT 1 cut(s) 1122
BtgZI GCGATG 1 cut(s) 324
BtsCI GGATG 1 cut(s) 1081
CciI TCATGA 1 cut(s) 486
Cfr10I RCCGGY 1 cut(s) 650
Cfr13I GGNCC 2 cut(s) 196, 684
ClaI ATCGAT 1 cut(s) 1122
CseI GACGC 1 cut(s) 76
Csp6I GTAC 2 cut(s) 624, 703
CviAII CATG 5 cut(s) 37, 154, 487, 931, 1159
CviQI GTAC 2 cut(s) 624, 703
DdeI CTNAG 1 cut(s) 619
DpnI GATC 7 cut(s) 113, 279, 354, 480, 513, 644, 699
DpnII GATC 7 cut(s) 111, 277, 352, 478, 511, 642, 697
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
Eco130I CCWWGG 2 cut(s) 348, 657
Eco47I GGWCC 1 cut(s) 196
Eco57I CTGAAG 1 cut(s) 362
Eco81I CCTNAGG 1 cut(s) 619
Eco88I CYCGRG 2 cut(s) 464, 686
EcoRI GAATTC 3 cut(s) 446, 692, 749
EcoRII CCWGG 4 cut(s) 98, 553, 606, 1007
EcoT14I CCWWGG 2 cut(s) 348, 657
ErhI CCWWGG 2 cut(s) 348, 657
FaeI CATG 5 cut(s) 40, 157, 490, 934, 1162
FalI AAGNNNNNCTT 2 cut(s) 314, 346
FaqI GGGAC 1 cut(s) 1045
FatI CATG 5 cut(s) 36, 153, 486, 930, 1158
FbaI TGATCA 2 cut(s) 111, 277
FblI GTMKAC 2 cut(s) 104, 612
Fnu4HI GCNGC 2 cut(s) 1038, 1182
FokI GGATG 1 cut(s) 1088
Fsp4HI GCNGC 2 cut(s) 1038, 1182
FspBI CTAG 4 cut(s) 356, 401, 411, 1222
GluI GCNGC 2 cut(s) 1038, 1182
HaeIII GGCC 2 cut(s) 378, 685
HapII CCGG 3 cut(s) 23, 651, 848
HgaI GACGC 1 cut(s) 76
Hin1I GRCGYC 1 cut(s) 87
Hin1II CATG 5 cut(s) 40, 157, 490, 934, 1162
HincII GTYRAC 1 cut(s) 541
HindII GTYRAC 1 cut(s) 541
HindIII AAGCTT 3 cut(s) 452, 525, 1133
HinfI GANTC 8 cut(s) 65, 78, 325, 359, 430, 863, 911, 1081
HpaI GTTAAC 1 cut(s) 541
HpaII CCGG 3 cut(s) 23, 651, 848
HphI GGTGA 4 cut(s) 569, 584, 985, 1015
Hpy166II GTNNAC 4 cut(s) 91, 105, 541, 613
Hpy188I TCNGA 2 cut(s) 282, 1096
Hpy188III TCNNGA 8 cut(s) 51, 62, 202, 356, 476, 487, 646, 848
Hpy8I GTNNAC 4 cut(s) 91, 105, 541, 613
HpyAV CCTTC 3 cut(s) 226, 277, 726
HpyCH4III ACNGT 4 cut(s) 241, 572, 817, 854
HpyCH4IV ACGT 3 cut(s) 417, 543, 894
HpyCH4V TGCA 4 cut(s) 15, 40, 1060, 1116
HpyF3I CTNAG 1 cut(s) 619
HpySE526I ACGT 3 cut(s) 417, 543, 894
Hsp92I GRCGYC 1 cut(s) 87
Hsp92II CATG 5 cut(s) 40, 157, 490, 934, 1162
Kpn2I TCCGGA 1 cut(s) 847
Ksp22I TGATCA 2 cut(s) 111, 277
KspAI GTTAAC 1 cut(s) 541
Kzo9I GATC 7 cut(s) 111, 277, 352, 478, 511, 642, 697
LmnI GCTCC 4 cut(s) 286, 659, 736, 1010
Lsp1109I GCAGC 1 cut(s) 1168
MaeI CTAG 4 cut(s) 356, 401, 411, 1222
MaeII ACGT 3 cut(s) 417, 543, 894
MaeIII GTNAC 2 cut(s) 413, 764
MalI GATC 7 cut(s) 113, 279, 354, 480, 513, 644, 699
MboI GATC 7 cut(s) 111, 277, 352, 478, 511, 642, 697
MboII GAAGA 6 cut(s) 38, 334, 355, 575, 962, 992
MflI RGATCY 1 cut(s) 352
MlyI GAGTC 1 cut(s) 872
MmeI TCCRAC 1 cut(s) 526
MroI TCCGGA 1 cut(s) 847
MroXI GAANNNNTTC 1 cut(s) 786
MseI TTAA 8 cut(s) 459, 540, 588, 708, 797, 885, 999, 1137
MslI CAYNNNNRTG 2 cut(s) 384, 871
MspCI CTTAAG 1 cut(s) 1136
MspI CCGG 3 cut(s) 23, 651, 848
MspR9I CCNGG 4 cut(s) 100, 555, 608, 1009
MvaI CCWGG 4 cut(s) 100, 555, 608, 1009
NdeII GATC 7 cut(s) 111, 277, 352, 478, 511, 642, 697
NlaIII CATG 5 cut(s) 40, 157, 490, 934, 1162
NlaIV GGNNCC 2 cut(s) 655, 1006
NmuCI GTSAC 2 cut(s) 413, 764
PaeR7I CTCGAG 1 cut(s) 464
PagI TCATGA 1 cut(s) 486
PdmI GAANNNNTTC 1 cut(s) 786
PfeI GAWTC 7 cut(s) 65, 78, 325, 359, 430, 911, 1081
PfoI TCCNGGA 1 cut(s) 1007
PkrI GCNGC 2 cut(s) 1039, 1183
PleI GAGTC 1 cut(s) 871
PpsI GAGTC 1 cut(s) 871
PshBI ATTAAT 1 cut(s) 797
PsiI TTATAA 1 cut(s) 264
Psp1406I AACGTT 2 cut(s) 543, 894
Psp6I CCWGG 4 cut(s) 98, 553, 606, 1007
PspGI CCWGG 4 cut(s) 98, 553, 606, 1007
PspN4I GGNNCC 2 cut(s) 655, 1006
PspPI GGNCC 2 cut(s) 196, 684
PspXI VCTCGAGB 1 cut(s) 464
PsuI RGATCY 1 cut(s) 352
RsaI GTAC 2 cut(s) 625, 704
RsaNI GTAC 2 cut(s) 624, 703
RseI CAYNNNNRTG 2 cut(s) 384, 871
SaqAI TTAA 8 cut(s) 459, 540, 588, 708, 797, 885, 999, 1137
SatI GCNGC 2 cut(s) 1038, 1182
Sau3AI GATC 7 cut(s) 111, 277, 352, 478, 511, 642, 697
Sau96I GGNCC 2 cut(s) 196, 684
SchI GAGTC 1 cut(s) 872
ScrFI CCNGG 4 cut(s) 100, 555, 608, 1009
Sfr274I CTCGAG 1 cut(s) 464
SinI GGWCC 1 cut(s) 196
SlaI CTCGAG 1 cut(s) 464
SmiMI CAYNNNNRTG 2 cut(s) 384, 871
SmlI CTYRAG 4 cut(s) 200, 464, 1046, 1136
SmoI CTYRAG 4 cut(s) 200, 464, 1046, 1136
SsiI CCGC 1 cut(s) 1038
SspMI CTAG 4 cut(s) 356, 401, 411, 1222
StyD4I CCNGG 4 cut(s) 98, 553, 606, 1007
StyI CCWWGG 2 cut(s) 348, 657
TaaI ACNGT 4 cut(s) 241, 572, 817, 854
TaiI ACGT 3 cut(s) 420, 546, 897
TaqI TCGA 4 cut(s) 465, 696, 753, 1122
TaqII GACCGA 1 cut(s) 184
TatI WGTACW 1 cut(s) 702
TauI GCSGC 1 cut(s) 1040
TfiI GAWTC 7 cut(s) 65, 78, 325, 359, 430, 911, 1081
Tru1I TTAA 8 cut(s) 459, 540, 588, 708, 797, 885, 999, 1137
Tru9I TTAA 8 cut(s) 459, 540, 588, 708, 797, 885, 999, 1137
TseFI GTSAC 2 cut(s) 413, 764
TseI GCWGC 1 cut(s) 1181
Tsp45I GTSAC 2 cut(s) 413, 764
TspDTI ATGAA 5 cut(s) 118, 287, 821, 905, 924
Vha464I CTTAAG 1 cut(s) 1136
VpaK11BI GGWCC 1 cut(s) 196
VspI ATTAAT 1 cut(s) 797
XapI RAATTY 4 cut(s) 125, 446, 692, 749
XbaI TCTAGA 1 cut(s) 355
XcmI CCANNNNNNNNNTGG 2 cut(s) 1062, 1156
XhoI CTCGAG 1 cut(s) 464
XmiI GTMKAC 2 cut(s) 104, 612
XmnI GAANNNNTTC 1 cut(s) 786
XspI CTAG 4 cut(s) 356, 401, 411, 1222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.