Class S F-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FBA_3 | PF08268 | 116 - 395 | 4.4e-21 | F-box associated beta propeller domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1131 |
| Acc36I | ACCTGC | 1 cut(s) | 398 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1169 |
| AccIII | TCCGGA | 1 cut(s) | 889 |
| AciI | CCGC | 1 cut(s) | 23 |
| AclI | AACGTT | 1 cut(s) | 441 |
| AclWI | GGATC | 1 cut(s) | 1175 |
| AcsI | RAATTY | 6 cut(s) | 164, 237, 279, 479, 786, 905 |
| AcuI | CTGAAG | 1 cut(s) | 633 |
| AcvI | CACGTG | 1 cut(s) | 902 |
| AfaI | GTAC | 7 cut(s) | 39, 104, 692, 735, 745, 776, 1255 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1169 |
| AflIII | ACRYGT | 1 cut(s) | 899 |
| AgeI | ACCGGT | 1 cut(s) | 1048 |
| AgsI | TTSAA | 5 cut(s) | 82, 471, 484, 678, 781 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 778, 810 |
| AleI | CACNNNNGTG | 1 cut(s) | 1153 |
| AluBI | AGCT | 6 cut(s) | 334, 611, 810, 868, 944, 1246 |
| AluI | AGCT | 6 cut(s) | 334, 611, 810, 868, 944, 1246 |
| Alw26I | GTCTC | 3 cut(s) | 887, 1163, 1230 |
| AlwI | GGATC | 1 cut(s) | 1175 |
| Ama87I | CYCGRG | 1 cut(s) | 1247 |
| Aor13HI | TCCGGA | 1 cut(s) | 889 |
| ApeKI | GCWGC | 1 cut(s) | 274 |
| ApoI | RAATTY | 6 cut(s) | 164, 237, 279, 479, 786, 905 |
| AsiGI | ACCGGT | 1 cut(s) | 1048 |
| AspS9I | GGNCC | 1 cut(s) | 1046 |
| AsuHPI | GGTGA | 4 cut(s) | 160, 332, 943, 1114 |
| AvaI | CYCGRG | 1 cut(s) | 1247 |
| AvaII | GGWCC | 1 cut(s) | 1046 |
| AxyI | CCTNAGG | 1 cut(s) | 697 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 1246 |
| BbrPI | CACGTG | 1 cut(s) | 902 |
| BbsI | GAAGAC | 2 cut(s) | 497, 1005 |
| BbvI | GCAGC | 1 cut(s) | 286 |
| BccI | CCATC | 2 cut(s) | 413, 894 |
| BceAI | ACGGC | 1 cut(s) | 853 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 552, 586, 947, 981 |
| BclI | TGATCA | 1 cut(s) | 325 |
| BcoDI | GTCTC | 3 cut(s) | 887, 1163, 1230 |
| BfaI | CTAG | 2 cut(s) | 822, 1005 |
| BfuAI | ACCTGC | 1 cut(s) | 398 |
| BisI | GCNGC | 1 cut(s) | 275 |
| BlsI | GCNGC | 1 cut(s) | 276 |
| BmcAI | AGTACT | 1 cut(s) | 745 |
| Bme18I | GGWCC | 1 cut(s) | 1046 |
| BmeT110I | CYCGRG | 1 cut(s) | 1247 |
| BmgT120I | GGNCC | 1 cut(s) | 1046 |
| BmsI | GCATC | 4 cut(s) | 63, 192, 790, 955 |
| BpiI | GAAGAC | 2 cut(s) | 497, 1005 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 43, 75 |
| BpuEI | CTTGAG | 2 cut(s) | 191, 1136 |
| BsaAI | YACGTR | 2 cut(s) | 255, 902 |
| BsaWI | WCCGGW | 2 cut(s) | 889, 1048 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1169 |
| Bse118I | RCCGGY | 1 cut(s) | 1048 |
| Bse1I | ACTGG | 1 cut(s) | 640 |
| Bse21I | CCTNAGG | 1 cut(s) | 697 |
| Bse3DI | GCAATG | 1 cut(s) | 290 |
| BseAI | TCCGGA | 1 cut(s) | 889 |
| BseGI | GGATG | 6 cut(s) | 183, 454, 535, 670, 805, 886 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1169 |
| BseMI | GCAATG | 1 cut(s) | 290 |
| BseMII | CTCAG | 2 cut(s) | 149, 1176 |
| BseNI | ACTGG | 1 cut(s) | 640 |
| BseXI | GCAGC | 1 cut(s) | 286 |
| BshTI | ACCGGT | 1 cut(s) | 1048 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1247 |
| BsiSI | CCGG | 2 cut(s) | 890, 1049 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1169 |
| BsmAI | GTCTC | 3 cut(s) | 887, 1163, 1230 |
| BsmI | GAATGC | 1 cut(s) | 1111 |
| BsoBI | CYCGRG | 1 cut(s) | 1247 |
| Bsp13I | TCCGGA | 1 cut(s) | 889 |
| Bsp1407I | TGTACA | 1 cut(s) | 690 |
| Bsp143I | GATC | 4 cut(s) | 310, 325, 720, 1180 |
| BspACI | CCGC | 1 cut(s) | 23 |
| BspCNI | CTCAG | 2 cut(s) | 148, 1177 |
| BspEI | TCCGGA | 1 cut(s) | 889 |
| BspMI | ACCTGC | 1 cut(s) | 398 |
| BspPI | GGATC | 1 cut(s) | 1175 |
| BsrDI | GCAATG | 1 cut(s) | 290 |
| BsrFI | RCCGGY | 1 cut(s) | 1048 |
| BsrGI | TGTACA | 1 cut(s) | 690 |
| BsrI | ACTGG | 1 cut(s) | 640 |
| BssAI | RCCGGY | 1 cut(s) | 1048 |
| BssMI | GATC | 4 cut(s) | 310, 325, 720, 1180 |
| Bst4CI | ACNGT | 5 cut(s) | 202, 215, 288, 748, 828 |
| Bst6I | CTCTTC | 3 cut(s) | 21, 178, 1076 |
| BstAUI | TGTACA | 1 cut(s) | 690 |
| BstBAI | YACGTR | 2 cut(s) | 255, 902 |
| BstDEI | CTNAG | 3 cut(s) | 135, 697, 1185 |
| BstF5I | GGATG | 6 cut(s) | 183, 454, 535, 670, 805, 886 |
| BstKTI | GATC | 4 cut(s) | 313, 328, 723, 1183 |
| BstMAI | GTCTC | 3 cut(s) | 887, 1163, 1230 |
| BstMBI | GATC | 4 cut(s) | 310, 325, 720, 1180 |
| BstSNI | TACGTA | 1 cut(s) | 255 |
| BstV1I | GCAGC | 1 cut(s) | 286 |
| BstV2I | GAAGAC | 2 cut(s) | 497, 1005 |
| BstX2I | RGATCY | 1 cut(s) | 1180 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 525 |
| BstYI | RGATCY | 1 cut(s) | 1180 |
| Bsu36I | CCTNAGG | 1 cut(s) | 697 |
| BtsCI | GGATG | 6 cut(s) | 183, 454, 535, 670, 805, 886 |
| BveI | ACCTGC | 1 cut(s) | 398 |
| Cfr10I | RCCGGY | 1 cut(s) | 1048 |
| Cfr13I | GGNCC | 1 cut(s) | 1046 |
| Csp6I | GTAC | 7 cut(s) | 38, 103, 691, 734, 744, 775, 1254 |
| CspAI | ACCGGT | 1 cut(s) | 1048 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 111, 146, 567, 602 |
| CviAII | CATG | 4 cut(s) | 46, 99, 154, 1169 |
| CviQI | GTAC | 7 cut(s) | 38, 103, 691, 734, 744, 775, 1254 |
| DdeI | CTNAG | 3 cut(s) | 135, 697, 1185 |
| DpnI | GATC | 4 cut(s) | 312, 327, 722, 1182 |
| DpnII | GATC | 4 cut(s) | 310, 325, 720, 1180 |
| DraI | TTTAAA | 2 cut(s) | 399, 1015 |
| Eam1104I | CTCTTC | 3 cut(s) | 21, 178, 1076 |
| EarI | CTCTTC | 3 cut(s) | 21, 178, 1076 |
| EciI | GGCGGA | 1 cut(s) | 38 |
| Eco105I | TACGTA | 1 cut(s) | 255 |
| Eco32I | GATATC | 1 cut(s) | 247 |
| Eco47I | GGWCC | 1 cut(s) | 1046 |
| Eco57I | CTGAAG | 1 cut(s) | 633 |
| Eco72I | CACGTG | 1 cut(s) | 902 |
| Eco81I | CCTNAGG | 1 cut(s) | 697 |
| Eco88I | CYCGRG | 1 cut(s) | 1247 |
| EcoRI | GAATTC | 1 cut(s) | 479 |
| EcoRV | GATATC | 1 cut(s) | 247 |
| EcoT22I | ATGCAT | 1 cut(s) | 1170 |
| FaeI | CATG | 4 cut(s) | 49, 102, 157, 1172 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 341, 373 |
| FatI | CATG | 4 cut(s) | 45, 98, 153, 1168 |
| FbaI | TGATCA | 1 cut(s) | 325 |
| Fnu4HI | GCNGC | 1 cut(s) | 275 |
| FokI | GGATG | 6 cut(s) | 170, 461, 542, 657, 812, 873 |
| Fsp4HI | GCNGC | 1 cut(s) | 275 |
| FspBI | CTAG | 2 cut(s) | 822, 1005 |
| GluI | GCNGC | 1 cut(s) | 275 |
| HapII | CCGG | 2 cut(s) | 890, 1049 |
| Hin1II | CATG | 4 cut(s) | 49, 102, 157, 1172 |
| HincII | GTYRAC | 1 cut(s) | 439 |
| HindII | GTYRAC | 1 cut(s) | 439 |
| HpaI | GTTAAC | 1 cut(s) | 439 |
| HpaII | CCGG | 2 cut(s) | 890, 1049 |
| HphI | GGTGA | 4 cut(s) | 160, 332, 943, 1114 |
| Hpy166II | GTNNAC | 7 cut(s) | 439, 619, 645, 691, 693, 1231, 1254 |
| Hpy188I | TCNGA | 2 cut(s) | 138, 574 |
| Hpy188III | TCNNGA | 6 cut(s) | 51, 242, 329, 678, 890, 1184 |
| Hpy8I | GTNNAC | 7 cut(s) | 439, 619, 645, 691, 693, 1231, 1254 |
| HpyAV | CCTTC | 4 cut(s) | 477, 684, 771, 953 |
| HpyCH4III | ACNGT | 5 cut(s) | 202, 215, 288, 748, 828 |
| HpyCH4IV | ACGT | 3 cut(s) | 254, 441, 901 |
| HpyCH4V | TGCA | 7 cut(s) | 7, 183, 306, 407, 462, 848, 1168 |
| HpyF3I | CTNAG | 3 cut(s) | 135, 697, 1185 |
| HpySE526I | ACGT | 3 cut(s) | 254, 441, 901 |
| Hsp92II | CATG | 4 cut(s) | 49, 102, 157, 1172 |
| Kpn2I | TCCGGA | 1 cut(s) | 889 |
| Ksp22I | TGATCA | 1 cut(s) | 325 |
| KspAI | GTTAAC | 1 cut(s) | 439 |
| Kzo9I | GATC | 4 cut(s) | 310, 325, 720, 1180 |
| LmnI | GCTCC | 1 cut(s) | 973 |
| LpnPI | CCDG | 6 cut(s) | 393, 636, 653, 903, 1062, 1197 |
| Lsp1109I | GCAGC | 1 cut(s) | 286 |
| LweI | GCATC | 4 cut(s) | 63, 192, 790, 955 |
| MaeI | CTAG | 2 cut(s) | 822, 1005 |
| MaeII | ACGT | 3 cut(s) | 254, 441, 901 |
| MaeIII | GTNAC | 2 cut(s) | 215, 1085 |
| MalI | GATC | 4 cut(s) | 312, 327, 722, 1182 |
| MboI | GATC | 4 cut(s) | 310, 325, 720, 1180 |
| MflI | RGATCY | 1 cut(s) | 1180 |
| MlyI | GAGTC | 2 cut(s) | 766, 995 |
| MmeI | TCCRAC | 2 cut(s) | 692, 734 |
| MnlI | CCTC | 6 cut(s) | 69, 181, 215, 439, 553, 679 |
| Mph1103I | ATGCAT | 1 cut(s) | 1170 |
| MroI | TCCGGA | 1 cut(s) | 889 |
| MseI | TTAA | 6 cut(s) | 297, 348, 398, 438, 909, 1014 |
| MslI | CAYNNNNRTG | 3 cut(s) | 318, 417, 1153 |
| MspI | CCGG | 2 cut(s) | 890, 1049 |
| Mva1269I | GAATGC | 1 cut(s) | 1111 |
| NdeII | GATC | 4 cut(s) | 310, 325, 720, 1180 |
| NlaIII | CATG | 4 cut(s) | 49, 102, 157, 1172 |
| NsiI | ATGCAT | 1 cut(s) | 1170 |
| OliI | CACNNNNGTG | 1 cut(s) | 1153 |
| PaeR7I | CTCGAG | 1 cut(s) | 1247 |
| PctI | GAATGC | 1 cut(s) | 1111 |
| PfeI | GAWTC | 8 cut(s) | 78, 139, 569, 575, 602, 935, 1063, 1093 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1169 |
| PinAI | ACCGGT | 1 cut(s) | 1048 |
| PkrI | GCNGC | 1 cut(s) | 276 |
| PleI | GAGTC | 2 cut(s) | 765, 995 |
| PmaCI | CACGTG | 1 cut(s) | 902 |
| PmlI | CACGTG | 1 cut(s) | 902 |
| PpsI | GAGTC | 2 cut(s) | 765, 995 |
| Ppu21I | YACGTR | 2 cut(s) | 255, 902 |
| PsiI | TTATAA | 1 cut(s) | 1131 |
| Psp1406I | AACGTT | 1 cut(s) | 441 |
| PspCI | CACGTG | 1 cut(s) | 902 |
| PspPI | GGNCC | 1 cut(s) | 1046 |
| PspXI | VCTCGAGB | 1 cut(s) | 1247 |
| PsuI | RGATCY | 1 cut(s) | 1180 |
| RsaI | GTAC | 7 cut(s) | 39, 104, 692, 735, 745, 776, 1255 |
| RsaNI | GTAC | 7 cut(s) | 38, 103, 691, 734, 744, 775, 1254 |
| RseI | CAYNNNNRTG | 3 cut(s) | 318, 417, 1153 |
| SaqAI | TTAA | 6 cut(s) | 297, 348, 398, 438, 909, 1014 |
| SatI | GCNGC | 1 cut(s) | 275 |
| Sau3AI | GATC | 4 cut(s) | 310, 325, 720, 1180 |
| Sau96I | GGNCC | 1 cut(s) | 1046 |
| ScaI | AGTACT | 1 cut(s) | 745 |
| SchI | GAGTC | 2 cut(s) | 766, 995 |
| SfaNI | GCATC | 4 cut(s) | 63, 192, 790, 955 |
| Sfr274I | CTCGAG | 1 cut(s) | 1247 |
| SinI | GGWCC | 1 cut(s) | 1046 |
| SlaI | CTCGAG | 1 cut(s) | 1247 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 318, 417, 1153 |
| SmlI | CTYRAG | 3 cut(s) | 206, 1151, 1247 |
| SmoI | CTYRAG | 3 cut(s) | 206, 1151, 1247 |
| SnaBI | TACGTA | 1 cut(s) | 255 |
| SsiI | CCGC | 1 cut(s) | 23 |
| SspMI | CTAG | 2 cut(s) | 822, 1005 |
| TaaI | ACNGT | 5 cut(s) | 202, 215, 288, 748, 828 |
| TaiI | ACGT | 3 cut(s) | 257, 444, 904 |
| TaqI | TCGA | 3 cut(s) | 50, 981, 1248 |
| TatI | WGTACW | 4 cut(s) | 690, 733, 743, 774 |
| TfiI | GAWTC | 8 cut(s) | 78, 139, 569, 575, 602, 935, 1063, 1093 |
| Tru1I | TTAA | 6 cut(s) | 297, 348, 398, 438, 909, 1014 |
| Tru9I | TTAA | 6 cut(s) | 297, 348, 398, 438, 909, 1014 |
| TseI | GCWGC | 1 cut(s) | 274 |
| TspDTI | ATGAA | 7 cut(s) | 34, 170, 249, 552, 558, 753, 1011 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1169 |
| VpaK11BI | GGWCC | 1 cut(s) | 1046 |
| XapI | RAATTY | 6 cut(s) | 164, 237, 279, 479, 786, 905 |
| XhoI | CTCGAG | 1 cut(s) | 1247 |
| XspI | CTAG | 2 cut(s) | 822, 1005 |
| ZrmI | AGTACT | 1 cut(s) | 745 |
| Zsp2I | ATGCAT | 1 cut(s) | 1170 |