Cyclic phosphodiesterase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PEN-2 | PF10251 | 36 - 123 | 2.9e-28 | Presenilin enhancer-2 subunit of gamma secretase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 203, 219 |
| AciI | CCGC | 4 cut(s) | 201, 208, 217, 255 |
| AclWI | GGATC | 2 cut(s) | 246, 320 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 72 |
| AjnI | CCWGG | 1 cut(s) | 293 |
| AluBI | AGCT | 2 cut(s) | 123, 399 |
| AluI | AGCT | 2 cut(s) | 123, 399 |
| Alw26I | GTCTC | 1 cut(s) | 63 |
| AlwI | GGATC | 2 cut(s) | 246, 320 |
| AoxI | GGCC | 4 cut(s) | 74, 174, 197, 297 |
| ApaI | GGGCCC | 1 cut(s) | 301 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 185 |
| AspS9I | GGNCC | 6 cut(s) | 75, 89, 174, 198, 297, 298 |
| AsuHPI | GGTGA | 1 cut(s) | 295 |
| AvaII | GGWCC | 1 cut(s) | 89 |
| BaeGI | GKGCMC | 1 cut(s) | 301 |
| BanII | GRGCYC | 1 cut(s) | 301 |
| BccI | CCATC | 1 cut(s) | 89 |
| BceAI | ACGGC | 3 cut(s) | 161, 242, 254 |
| BciT130I | CCWGG | 1 cut(s) | 295 |
| BcoDI | GTCTC | 1 cut(s) | 63 |
| BfaI | CTAG | 1 cut(s) | 33 |
| Bme1390I | CCNGG | 1 cut(s) | 295 |
| Bme18I | GGWCC | 1 cut(s) | 89 |
| BmgT120I | GGNCC | 6 cut(s) | 75, 89, 174, 198, 297, 298 |
| BmiI | GGNNCC | 1 cut(s) | 299 |
| BmrFI | CCNGG | 1 cut(s) | 295 |
| BmrI | ACTGGG | 1 cut(s) | 104 |
| BmsI | GCATC | 1 cut(s) | 240 |
| BmuI | ACTGGG | 1 cut(s) | 104 |
| BsaJI | CCNNGG | 2 cut(s) | 38, 294 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 72 |
| Bse1I | ACTGG | 2 cut(s) | 99, 394 |
| BseBI | CCWGG | 1 cut(s) | 295 |
| BseDI | CCNNGG | 2 cut(s) | 38, 294 |
| BseGI | GGATG | 2 cut(s) | 231, 352 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 72 |
| BseMII | CTCAG | 1 cut(s) | 239 |
| BseNI | ACTGG | 2 cut(s) | 99, 394 |
| BseRI | GAGGAG | 2 cut(s) | 38, 333 |
| BseSI | GKGCMC | 1 cut(s) | 301 |
| BshFI | GGCC | 4 cut(s) | 76, 176, 199, 299 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 72 |
| BsmAI | GTCTC | 1 cut(s) | 63 |
| BsmBI | CGTCTC | 1 cut(s) | 63 |
| BsnI | GGCC | 4 cut(s) | 76, 176, 199, 299 |
| Bsp120I | GGGCCC | 1 cut(s) | 297 |
| Bsp1286I | GDGCHC | 1 cut(s) | 301 |
| Bsp143I | GATC | 2 cut(s) | 251, 312 |
| BspACI | CCGC | 4 cut(s) | 201, 208, 217, 255 |
| BspANI | GGCC | 4 cut(s) | 76, 176, 199, 299 |
| BspCNI | CTCAG | 1 cut(s) | 240 |
| BspLI | GGNNCC | 1 cut(s) | 299 |
| BspPI | GGATC | 2 cut(s) | 246, 320 |
| BsrBI | CCGCTC | 2 cut(s) | 203, 219 |
| BsrI | ACTGG | 2 cut(s) | 99, 394 |
| BssECI | CCNNGG | 2 cut(s) | 38, 294 |
| BssMI | GATC | 2 cut(s) | 251, 312 |
| BssT1I | CCWWGG | 1 cut(s) | 38 |
| Bst2UI | CCWGG | 1 cut(s) | 295 |
| Bst4CI | ACNGT | 1 cut(s) | 89 |
| BstC8I | GCNNGC | 1 cut(s) | 201 |
| BstDEI | CTNAG | 1 cut(s) | 248 |
| BstF5I | GGATG | 2 cut(s) | 231, 352 |
| BstKTI | GATC | 2 cut(s) | 254, 315 |
| BstMAI | GTCTC | 1 cut(s) | 63 |
| BstMBI | GATC | 2 cut(s) | 251, 312 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 166, 216 |
| BstNI | CCWGG | 1 cut(s) | 295 |
| BstNSI | RCATGY | 1 cut(s) | 341 |
| BstSCI | CCNGG | 1 cut(s) | 293 |
| BstSLI | GKGCMC | 1 cut(s) | 301 |
| BstX2I | RGATCY | 1 cut(s) | 251 |
| BstYI | RGATCY | 1 cut(s) | 251 |
| BsuRI | GGCC | 4 cut(s) | 76, 176, 199, 299 |
| BtsCI | GGATG | 2 cut(s) | 231, 352 |
| BtsI | GCAGTG | 1 cut(s) | 276 |
| BtsIMutI | CAGTG | 3 cut(s) | 92, 276, 387 |
| Cac8I | GCNNGC | 1 cut(s) | 201 |
| Cfr13I | GGNCC | 6 cut(s) | 75, 89, 174, 198, 297, 298 |
| CseI | GACGC | 1 cut(s) | 314 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 81, 116 |
| CviAII | CATG | 2 cut(s) | 338, 358 |
| CviJI | RGCY | 9 cut(s) | 8, 36, 76, 99, 123, 176, 199, 299, 399 |
| CviKI_1 | RGCY | 9 cut(s) | 8, 36, 76, 99, 123, 176, 199, 299, 399 |
| DdeI | CTNAG | 1 cut(s) | 248 |
| DpnI | GATC | 2 cut(s) | 253, 314 |
| DpnII | GATC | 2 cut(s) | 251, 312 |
| EciI | GGCGGA | 2 cut(s) | 197, 244 |
| Eco130I | CCWWGG | 1 cut(s) | 38 |
| Eco24I | GRGCYC | 1 cut(s) | 301 |
| Eco32I | GATATC | 1 cut(s) | 16 |
| Eco47I | GGWCC | 1 cut(s) | 89 |
| EcoO109I | RGGNCCY | 1 cut(s) | 298 |
| EcoRII | CCWGG | 1 cut(s) | 293 |
| EcoRV | GATATC | 1 cut(s) | 16 |
| EcoT14I | CCWWGG | 1 cut(s) | 38 |
| EcoT38I | GRGCYC | 1 cut(s) | 301 |
| ErhI | CCWWGG | 1 cut(s) | 38 |
| Esp3I | CGTCTC | 1 cut(s) | 63 |
| FaeI | CATG | 2 cut(s) | 341, 361 |
| FaiI | YATR | 3 cut(s) | 339, 359, 363 |
| FatI | CATG | 2 cut(s) | 337, 357 |
| FauI | CCCGC | 2 cut(s) | 208, 224 |
| FokI | GGATG | 2 cut(s) | 218, 359 |
| FriOI | GRGCYC | 1 cut(s) | 301 |
| FspBI | CTAG | 1 cut(s) | 33 |
| HaeIII | GGCC | 4 cut(s) | 76, 176, 199, 299 |
| HgaI | GACGC | 1 cut(s) | 314 |
| Hin1II | CATG | 2 cut(s) | 341, 361 |
| HinfI | GANTC | 4 cut(s) | 43, 113, 264, 384 |
| HphI | GGTGA | 1 cut(s) | 295 |
| Hpy166II | GTNNAC | 3 cut(s) | 92, 181, 276 |
| Hpy188I | TCNGA | 3 cut(s) | 106, 249, 317 |
| Hpy8I | GTNNAC | 3 cut(s) | 92, 181, 276 |
| Hpy99I | CGWCG | 3 cut(s) | 58, 89, 135 |
| HpyCH4III | ACNGT | 1 cut(s) | 89 |
| HpyCH4IV | ACGT | 1 cut(s) | 243 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 166, 216 |
| HpyF3I | CTNAG | 1 cut(s) | 248 |
| HpySE526I | ACGT | 1 cut(s) | 243 |
| Hsp92II | CATG | 2 cut(s) | 341, 361 |
| Kzo9I | GATC | 2 cut(s) | 251, 312 |
| LmnI | GCTCC | 1 cut(s) | 396 |
| LpnPI | CCDG | 6 cut(s) | 80, 181, 280, 307, 328, 375 |
| LweI | GCATC | 1 cut(s) | 240 |
| MaeI | CTAG | 1 cut(s) | 33 |
| MaeII | ACGT | 1 cut(s) | 243 |
| MalI | GATC | 2 cut(s) | 253, 314 |
| MbiI | CCGCTC | 2 cut(s) | 203, 219 |
| MboI | GATC | 2 cut(s) | 251, 312 |
| MboII | GAAGA | 1 cut(s) | 122 |
| MflI | RGATCY | 1 cut(s) | 251 |
| MhlI | GDGCHC | 1 cut(s) | 301 |
| MluCI | AATT | 1 cut(s) | 378 |
| MlyI | GAGTC | 1 cut(s) | 378 |
| MmeI | TCCRAC | 3 cut(s) | 84, 241, 374 |
| MnlI | CCTC | 6 cut(s) | 59, 78, 100, 237, 311, 311 |
| MroXI | GAANNNNTTC | 1 cut(s) | 185 |
| MspR9I | CCNGG | 1 cut(s) | 295 |
| MvaI | CCWGG | 1 cut(s) | 295 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 166, 216 |
| NdeII | GATC | 2 cut(s) | 251, 312 |
| NlaIII | CATG | 2 cut(s) | 341, 361 |
| NlaIV | GGNNCC | 1 cut(s) | 299 |
| NspI | RCATGY | 1 cut(s) | 341 |
| PdmI | GAANNNNTTC | 1 cut(s) | 185 |
| PfeI | GAWTC | 3 cut(s) | 43, 113, 264 |
| PleI | GAGTC | 1 cut(s) | 378 |
| PpsI | GAGTC | 1 cut(s) | 378 |
| Psp6I | CCWGG | 1 cut(s) | 293 |
| PspGI | CCWGG | 1 cut(s) | 293 |
| PspN4I | GGNNCC | 1 cut(s) | 299 |
| PspOMI | GGGCCC | 1 cut(s) | 297 |
| PspPI | GGNCC | 6 cut(s) | 75, 89, 174, 198, 297, 298 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 173, 205 |
| PsuI | RGATCY | 1 cut(s) | 251 |
| Sau3AI | GATC | 2 cut(s) | 251, 312 |
| Sau96I | GGNCC | 6 cut(s) | 75, 89, 174, 198, 297, 298 |
| SchI | GAGTC | 1 cut(s) | 378 |
| ScrFI | CCNGG | 1 cut(s) | 295 |
| SduI | GDGCHC | 1 cut(s) | 301 |
| SetI | ASST | 5 cut(s) | 125, 246, 308, 369, 401 |
| SfaNI | GCATC | 1 cut(s) | 240 |
| SinI | GGWCC | 1 cut(s) | 89 |
| Sse9I | AATT | 1 cut(s) | 378 |
| SsiI | CCGC | 4 cut(s) | 201, 208, 217, 255 |
| SspMI | CTAG | 1 cut(s) | 33 |
| StyD4I | CCNGG | 1 cut(s) | 293 |
| StyI | CCWWGG | 1 cut(s) | 38 |
| TaaI | ACNGT | 1 cut(s) | 89 |
| TaiI | ACGT | 1 cut(s) | 246 |
| TaqI | TCGA | 1 cut(s) | 84 |
| TaqII | GACCGA | 1 cut(s) | 106 |
| TasI | AATT | 1 cut(s) | 378 |
| TfiI | GAWTC | 3 cut(s) | 43, 113, 264 |
| TscAI | CASTG | 3 cut(s) | 99, 283, 394 |
| TspDTI | ATGAA | 1 cut(s) | 363 |
| TspGWI | ACGGA | 1 cut(s) | 153 |
| TspRI | CASTG | 3 cut(s) | 99, 283, 394 |
| VpaK11BI | GGWCC | 1 cut(s) | 89 |
| XceI | RCATGY | 1 cut(s) | 341 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 69 |
| XmnI | GAANNNNTTC | 1 cut(s) | 185 |
| XspI | CTAG | 1 cut(s) | 33 |