Rmu_sc0005442.1_g000001

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005442.1
OG0000046
Physical Location & Seq
Reverse (-)
1992 .. 4830
2839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005442.1_g000001.1.cds

Sequence Viewer

Length: 1980 bp
atggcacttgagaaggattcagagatagcagaattgacagagtctggcaaaaatattgcgcaagatgtggtggaacaaatcctatcaactctgcctcccaaatctcttatgcgattcaagtgcgtctctaaatggtggtaccatctcatcaccagtcccaggttcgtagccaagtacctgtccatttccaaacacaacagaccctcaacttgtgctcttataaagcgtttagtctgcaatgacgcagaagctcaagagcctgaaacggttttctcattgcttaacttttcctatgaaaatgataataacgctggtggtgcgcttagcactaatctttctagtgtggaagacctcacaatccctacaagggtagtcgaatcacttcgtattataggccattgtgatgggattgtttgtctagctttaatcgattatcagcagaggctagctaaacctagtcaagtgtgtctatggaatcctgcaattcagcaatttaaatttcttcccgaggagccattccttccagattggtccaaggtaccacacagccgtatggtccaagaatttgcttacctgcgtccaatatctctactcaatggtgaaaccatggggtttggctacgatcctaaatctaaagattacaaggttattgacattggattttctgattccaaattttatggtgatccagaatgttatggtggacatgtgattgtttatcctccaaaagtagtagtatacaccctgcaaactgattcttggagagagatcaagactttttctttggaaagggaaaccagttacctttggcctgatacgttccagctatacttggagggtgtttgttattggttgggatatgagcaacaaaaggaattcttatgtctatttcagactcaccaagaagaggaagaacgcattgcgcgagcgatcatttcgtttgatactagtgatgaggtttttcatgatataatgttaccgtatgggctactggaattttacggttttgataatttccttacattgcatcttacggagtggaatgagtctgttgctcttttcagcttgctttttgaggacgagcacaaagctacaatgtgggtgatggatgccaaaggtgcttggacaaagcaattaacttttgaatatgtagactactttccttacagcttacctcgaaagatattggcattttggaagagcaacgaaatttttggagttggagaaaatggatctattgtctgctataacctcaataccaaaattgtcaagcatcttccgattcgaagtgttccagattattttccaccctctagagacactttctatcctttttgttgtattgcttatgtgaatagtgtcgtaccaatcatgaatcatgggagaaggctgacgtggaaggatctgacagggatggtgactttgagtaacggtgagattcggacggctttggagggtttaactggttatgcagagcctgaaagcttcaaagctttgatgggcccttctggctccggcaaatcaaccttgcttgatgctctctctagccgtttggcttcgaatgccttccatctggctctgttttactcaatggacgcaaaagaaagctctctttcggcacagcttgcttcagcattttttataacacagacactacgtgcccaatcacgagatggaaggaatgtgatagcttcaattcacaagccaaacagtgaagtctttgaactatttgatcaactgtacttgctttctggtggcaacacagtttactttggtcaggcctctgaggcatatgaggtaagtagcctgatcagagttaggctaaatttgacagaagaagagaagaaaaatgctgaagaaaaagtcaatattctggatgaaagcattactagcatgagcttccccataactcgacttgcactgtacaaaattgactgcaaagatacaactctcaaatcctgggaaaagatcgctgaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

659

Amino Acids

75.18

Weight (kDa)

5.22

Isoelectric Point (pI)

40.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 221, 1643
Acc16I TGCGCA 1 cut(s) 60
Acc36I ACCTGC 1 cut(s) 582
Acc65I GGTACC 2 cut(s) 138, 538
AccB1I GGYRCC 2 cut(s) 138, 538
AccI GTMKAC 2 cut(s) 738, 1152
AccII CGCG 1 cut(s) 925
AclWI GGATC 4 cut(s) 617, 680, 1240, 1410
AcsI RAATTY 7 cut(s) 497, 563, 674, 875, 995, 1209, 1825
AcuI CTGAAG 2 cut(s) 1614, 1875
AdeI CACNNNGTG 1 cut(s) 1658
AfaI GTAC 6 cut(s) 140, 176, 540, 1365, 1742, 1925
AfiI CCNNNNNNNGG 3 cut(s) 159, 367, 907
AflIII ACRYGT 1 cut(s) 706
AgsI TTSAA 5 cut(s) 118, 1145, 1489, 1695, 1724
AhlI ACTAGT 1 cut(s) 947
AjiI CACGTC 1 cut(s) 1395
AjnI CCWGG 2 cut(s) 158, 1958
Alw21I GWGCWC 2 cut(s) 217, 1086
Alw26I GTCTC 2 cut(s) 130, 1311
AlwI GGATC 4 cut(s) 617, 680, 1240, 1410
AlwNI CAGNNNCTG 2 cut(s) 44, 1478
Ama87I CYCGRG 1 cut(s) 506
AoxI GGCC 4 cut(s) 394, 809, 1501, 1779
ApaI GGGCCC 1 cut(s) 1505
ApoI RAATTY 7 cut(s) 497, 563, 674, 875, 995, 1209, 1825
ArsI GACNNNNNNTTYG 2 cut(s) 766, 798
Asp700I GAANNNNTTC 2 cut(s) 381, 1565
Asp718I GGTACC 2 cut(s) 138, 538
AspLEI GCGC 3 cut(s) 61, 322, 925
AspS9I GGNCC 4 cut(s) 531, 556, 1501, 1502
AsuHPI GGTGA 7 cut(s) 142, 611, 695, 890, 1114, 1429, 1445
AsuII TTCGAA 2 cut(s) 1285, 1559
AsuNHI GCTAGC 1 cut(s) 445
AvaI CYCGRG 1 cut(s) 506
AvaII GGWCC 2 cut(s) 531, 556
BaeGI GKGCMC 2 cut(s) 1505, 1663
BanI GGYRCC 2 cut(s) 138, 538
BanII GRGCYC 1 cut(s) 1505
BauI CACGAG 1 cut(s) 1668
BbsI GAAGAC 1 cut(s) 354
Bbv12I GWGCWC 2 cut(s) 217, 1086
BccI CCATC 7 cut(s) 150, 398, 1099, 1408, 1492, 1578, 1667
BceAI ACGGC 3 cut(s) 534, 1461, 1533
BcgI CGANNNNNNTGC 2 cut(s) 102, 136
BciT130I CCWGG 2 cut(s) 160, 1960
BclI TGATCA 2 cut(s) 1732, 1809
BcoDI GTCTC 2 cut(s) 130, 1311
BcuI ACTAGT 1 cut(s) 947
BfaI CTAG 8 cut(s) 339, 419, 446, 456, 948, 1314, 1545, 1890
BfuAI ACCTGC 1 cut(s) 582
BglI GCCNNNNNGGC 2 cut(s) 1509, 1787
BlpI GCTNAGC 1 cut(s) 323
Bme1390I CCNGG 2 cut(s) 160, 1960
Bme18I GGWCC 2 cut(s) 531, 556
BmeT110I CYCGRG 1 cut(s) 506
BmgBI CACGTC 1 cut(s) 1395
BmgT120I GGNCC 4 cut(s) 531, 556, 1501, 1502
BmiI GGNNCC 5 cut(s) 140, 513, 540, 1503, 1513
BmrFI CCNGG 2 cut(s) 160, 1960
BmsI GCATC 4 cut(s) 1036, 1099, 1282, 1525
BmtI GCTAGC 1 cut(s) 449
BpiI GAAGAC 1 cut(s) 354
Bpu1102I GCTNAGC 1 cut(s) 323
Bpu14I TTCGAA 2 cut(s) 1285, 1559
BpuEI CTTGAG 2 cut(s) 29, 237
Bsa29I ATCGAT 1 cut(s) 429
BsaAI YACGTR 1 cut(s) 1658
BsaJI CCNNGG 5 cut(s) 158, 507, 534, 606, 1959
BsaXI ACNNNNNCTCC 2 cut(s) 79, 109
Bsc4I CCNNNNNNNGG 3 cut(s) 159, 367, 907
Bse1I ACTGG 4 cut(s) 153, 798, 996, 1468
Bse3DI GCAATG 4 cut(s) 244, 275, 918, 1022
BseBI CCWGG 2 cut(s) 160, 1960
BseCI ATCGAT 1 cut(s) 429
BseDI CCNNGG 5 cut(s) 158, 507, 534, 606, 1959
BseGI GGATG 3 cut(s) 1114, 1419, 1882
BseLI CCNNNNNNNGG 3 cut(s) 159, 367, 907
BseMI GCAATG 4 cut(s) 244, 275, 918, 1022
BseMII CTCAG 1 cut(s) 1776
BseNI ACTGG 4 cut(s) 153, 798, 996, 1468
BseRI GAGGAG 1 cut(s) 524
BseSI GKGCMC 2 cut(s) 1505, 1663
Bsh1236I CGCG 1 cut(s) 925
BshFI GGCC 4 cut(s) 396, 811, 1503, 1781
BshNI GGYRCC 2 cut(s) 138, 538
BshVI ATCGAT 1 cut(s) 429
BsiHKAI GWGCWC 2 cut(s) 217, 1086
BsiHKCI CYCGRG 1 cut(s) 506
BsiSI CCGG 1 cut(s) 1515
BslFI GGGAC 1 cut(s) 141
BslI CCNNNNNNNGG 3 cut(s) 159, 367, 907
BsmAI GTCTC 2 cut(s) 130, 1311
BsmBI CGTCTC 1 cut(s) 130
BsmFI GGGAC 1 cut(s) 141
BsmI GAATGC 1 cut(s) 1567
BsnI GGCC 4 cut(s) 396, 811, 1503, 1781
BsoBI CYCGRG 1 cut(s) 506
Bsp119I TTCGAA 2 cut(s) 1285, 1559
Bsp120I GGGCCC 1 cut(s) 1501
Bsp1286I GDGCHC 4 cut(s) 217, 1086, 1505, 1663
Bsp1407I TGTACA 1 cut(s) 1923
Bsp143I GATC 9 cut(s) 622, 685, 768, 930, 1232, 1402, 1732, 1809, 1968
Bsp1720I GCTNAGC 1 cut(s) 323
Bsp19I CCATGG 1 cut(s) 606
BspANI GGCC 4 cut(s) 396, 811, 1503, 1781
BspCNI CTCAG 1 cut(s) 1777
BspDI ATCGAT 1 cut(s) 429
BspFNI CGCG 1 cut(s) 925
BspHI TCATGA 2 cut(s) 964, 1371
BspLI GGNNCC 5 cut(s) 140, 513, 540, 1503, 1513
BspMI ACCTGC 1 cut(s) 582
BspOI GCTAGC 1 cut(s) 449
BspPI GGATC 4 cut(s) 617, 680, 1240, 1410
BspQI GCTCTTC 1 cut(s) 1193
BspT104I TTCGAA 2 cut(s) 1285, 1559
BspT107I GGYRCC 2 cut(s) 138, 538
BsrDI GCAATG 4 cut(s) 244, 275, 918, 1022
BsrGI TGTACA 1 cut(s) 1923
BsrI ACTGG 4 cut(s) 153, 798, 996, 1468
BssECI CCNNGG 5 cut(s) 158, 507, 534, 606, 1959
BssMI GATC 9 cut(s) 622, 685, 768, 930, 1232, 1402, 1732, 1809, 1968
BssNAI GTATAC 1 cut(s) 739
BssSI CACGAG 1 cut(s) 1668
BssT1I CCWWGG 2 cut(s) 534, 606
Bst1107I GTATAC 1 cut(s) 739
Bst2BI CACGAG 1 cut(s) 1668
Bst2UI CCWGG 2 cut(s) 160, 1960
Bst4CI ACNGT 8 cut(s) 268, 981, 1004, 1433, 1712, 1740, 1765, 1923
Bst6I CTCTTC 3 cut(s) 900, 1193, 1833
BstAPI GCANNNNNTGC 1 cut(s) 1625
BstAUI TGTACA 1 cut(s) 1923
BstBAI YACGTR 1 cut(s) 1658
BstBI TTCGAA 2 cut(s) 1285, 1559
BstC8I GCNNGC 4 cut(s) 447, 927, 1067, 1626
BstDEI CTNAG 2 cut(s) 323, 1785
BstDSI CCRYGG 1 cut(s) 606
BstF5I GGATG 3 cut(s) 1114, 1419, 1882
BstFNI CGCG 1 cut(s) 925
BstHHI GCGC 3 cut(s) 61, 322, 925
BstKTI GATC 9 cut(s) 625, 688, 771, 933, 1235, 1405, 1735, 1812, 1971
BstMAI GTCTC 2 cut(s) 130, 1311
BstMBI GATC 9 cut(s) 622, 685, 768, 930, 1232, 1402, 1732, 1809, 1968
BstMWI GCNNNNNNNGC 7 cut(s) 317, 1118, 1509, 1562, 1625, 1787, 1890
BstNI CCWGG 2 cut(s) 160, 1960
BstNSI RCATGY 1 cut(s) 710
BstSCI CCNGG 2 cut(s) 158, 1958
BstSLI GKGCMC 2 cut(s) 1505, 1663
BstUI CGCG 1 cut(s) 925
BstV2I GAAGAC 1 cut(s) 354
BstX2I RGATCY 2 cut(s) 1232, 1402
BstXI CCANNNNNNTGG 1 cut(s) 404
BstYI RGATCY 2 cut(s) 1232, 1402
BstZ17I GTATAC 1 cut(s) 739
Bsu15I ATCGAT 1 cut(s) 429
BsuRI GGCC 4 cut(s) 396, 811, 1503, 1781
BsuTUI ATCGAT 1 cut(s) 429
BtgI CCRYGG 1 cut(s) 606
BtrI CACGTC 1 cut(s) 1395
BtsCI GGATG 3 cut(s) 1114, 1419, 1882
BtsIMutI CAGTG 2 cut(s) 1717, 1919
BveI ACCTGC 1 cut(s) 582
Cac8I GCNNGC 4 cut(s) 447, 927, 1067, 1626
CaiI CAGNNNCTG 2 cut(s) 44, 1478
CciI TCATGA 2 cut(s) 964, 1371
CfoI GCGC 3 cut(s) 61, 322, 925
Cfr13I GGNCC 4 cut(s) 531, 556, 1501, 1502
ClaI ATCGAT 1 cut(s) 429
CseI GACGC 4 cut(s) 112, 251, 566, 1604
Csp6I GTAC 6 cut(s) 139, 175, 539, 1364, 1741, 1924
CviAII CATG 6 cut(s) 607, 707, 965, 1372, 1379, 1894
CviQI GTAC 6 cut(s) 139, 175, 539, 1364, 1741, 1924
DdeI CTNAG 2 cut(s) 323, 1785
DpnI GATC 9 cut(s) 624, 687, 770, 932, 1234, 1404, 1734, 1811, 1970
DpnII GATC 9 cut(s) 622, 685, 768, 930, 1232, 1402, 1732, 1809, 1968
DraI TTTAAA 1 cut(s) 496
DraIII CACNNNGTG 1 cut(s) 1658
Eam1104I CTCTTC 3 cut(s) 900, 1193, 1833
EarI CTCTTC 3 cut(s) 900, 1193, 1833
Eco130I CCWWGG 2 cut(s) 534, 606
Eco147I AGGCCT 1 cut(s) 1781
Eco24I GRGCYC 1 cut(s) 1505
Eco47I GGWCC 2 cut(s) 531, 556
Eco57I CTGAAG 2 cut(s) 1614, 1875
Eco88I CYCGRG 1 cut(s) 506
EcoO109I RGGNCCY 1 cut(s) 1502
EcoRI GAATTC 1 cut(s) 875
EcoRII CCWGG 2 cut(s) 158, 1958
EcoT14I CCWWGG 2 cut(s) 534, 606
EcoT38I GRGCYC 1 cut(s) 1505
ErhI CCWWGG 2 cut(s) 534, 606
Esp3I CGTCTC 1 cut(s) 130
FaeI CATG 6 cut(s) 610, 710, 968, 1375, 1382, 1897
FalI AAGNNNNNCTT 2 cut(s) 863, 895
FaqI GGGAC 1 cut(s) 141
FatI CATG 6 cut(s) 606, 706, 964, 1371, 1378, 1893
FauNDI CATATG 1 cut(s) 1792
FbaI TGATCA 2 cut(s) 1732, 1809
FblI GTMKAC 2 cut(s) 738, 1152
FokI GGATG 3 cut(s) 1121, 1426, 1889
FriOI GRGCYC 1 cut(s) 1505
FspBI CTAG 8 cut(s) 339, 419, 446, 456, 948, 1314, 1545, 1890
FspI TGCGCA 1 cut(s) 60
GlaI GCGC 3 cut(s) 60, 321, 924
HaeIII GGCC 4 cut(s) 396, 811, 1503, 1781
HapII CCGG 1 cut(s) 1515
HgaI GACGC 4 cut(s) 112, 251, 566, 1604
HhaI GCGC 3 cut(s) 61, 322, 925
Hin1II CATG 6 cut(s) 610, 710, 968, 1375, 1382, 1897
Hin6I GCGC 3 cut(s) 59, 320, 923
HinP1I GCGC 3 cut(s) 59, 320, 923
HindIII AAGCTT 2 cut(s) 1483, 1491
HpaII CCGG 1 cut(s) 1515
HphI GGTGA 7 cut(s) 142, 611, 695, 890, 1114, 1429, 1445
Hpy166II GTNNAC 4 cut(s) 704, 739, 1153, 1768
Hpy188I TCNGA 8 cut(s) 22, 667, 894, 1281, 1407, 1443, 1786, 1814
Hpy8I GTNNAC 4 cut(s) 704, 739, 1153, 1768
HpyAV CCTTC 7 cut(s) 7, 530, 1380, 1393, 1515, 1576, 1671
HpyCH4III ACNGT 8 cut(s) 268, 981, 1004, 1433, 1712, 1740, 1765, 1923
HpyCH4IV ACGT 3 cut(s) 818, 1394, 1657
HpyCH4V TGCA 7 cut(s) 237, 482, 748, 1027, 1472, 1919, 1938
HpyF10VI GCNNNNNNNGC 7 cut(s) 317, 1118, 1509, 1562, 1625, 1787, 1890
HpyF3I CTNAG 2 cut(s) 323, 1785
HpySE526I ACGT 3 cut(s) 818, 1394, 1657
Hsp92II CATG 6 cut(s) 610, 710, 968, 1375, 1382, 1897
HspAI GCGC 3 cut(s) 59, 320, 923
KpnI GGTACC 2 cut(s) 142, 542
Ksp22I TGATCA 2 cut(s) 1732, 1809
Kzo9I GATC 9 cut(s) 622, 685, 768, 930, 1232, 1402, 1732, 1809, 1968
LguI GCTCTTC 1 cut(s) 1193
LmnI GCTCC 2 cut(s) 511, 1517
LweI GCATC 4 cut(s) 1036, 1099, 1282, 1525
MaeI CTAG 8 cut(s) 339, 419, 446, 456, 948, 1314, 1545, 1890
MaeII ACGT 3 cut(s) 818, 1394, 1657
MaeIII GTNAC 4 cut(s) 800, 975, 1417, 1427
MalI GATC 9 cut(s) 624, 687, 770, 932, 1234, 1404, 1734, 1811, 1970
MboI GATC 9 cut(s) 622, 685, 768, 930, 1232, 1402, 1732, 1809, 1968
MflI RGATCY 2 cut(s) 1232, 1402
MhlI GDGCHC 4 cut(s) 217, 1086, 1505, 1663
MlyI GAGTC 3 cut(s) 50, 889, 1055
MmeI TCCRAC 1 cut(s) 1201
MroXI GAANNNNTTC 2 cut(s) 381, 1565
MseI TTAA 5 cut(s) 282, 425, 495, 1136, 1460
MslI CAYNNNNRTG 1 cut(s) 402
MspI CCGG 1 cut(s) 1515
MspR9I CCNGG 2 cut(s) 160, 1960
Mva1269I GAATGC 1 cut(s) 1567
MvaI CCWGG 2 cut(s) 160, 1960
MvnI CGCG 1 cut(s) 925
MwoI GCNNNNNNNGC 7 cut(s) 317, 1118, 1509, 1562, 1625, 1787, 1890
NcoI CCATGG 1 cut(s) 606
NdeI CATATG 1 cut(s) 1792
NdeII GATC 9 cut(s) 622, 685, 768, 930, 1232, 1402, 1732, 1809, 1968
NheI GCTAGC 1 cut(s) 445
NlaIII CATG 6 cut(s) 610, 710, 968, 1375, 1382, 1897
NlaIV GGNNCC 5 cut(s) 140, 513, 540, 1503, 1513
NmuCI GTSAC 1 cut(s) 1417
NsbI TGCGCA 1 cut(s) 60
NspI RCATGY 1 cut(s) 710
NspV TTCGAA 2 cut(s) 1285, 1559
PagI TCATGA 2 cut(s) 964, 1371
PceI AGGCCT 1 cut(s) 1781
PciI ACATGT 1 cut(s) 706
PciSI GCTCTTC 1 cut(s) 1193
PcsI WCGNNNNNNNCGW 1 cut(s) 922
PctI GAATGC 1 cut(s) 1567
PdmI GAANNNNTTC 2 cut(s) 381, 1565
PfeI GAWTC 9 cut(s) 17, 114, 377, 475, 668, 755, 1282, 1375, 1438
PflFI GACNNNGTC 1 cut(s) 40
PleI GAGTC 3 cut(s) 49, 889, 1054
PpsI GAGTC 3 cut(s) 49, 889, 1054
Ppu21I YACGTR 1 cut(s) 1658
PscI ACATGT 1 cut(s) 706
PsiI TTATAA 2 cut(s) 221, 1643
Psp6I CCWGG 2 cut(s) 158, 1958
PspGI CCWGG 2 cut(s) 158, 1958
PspN4I GGNNCC 5 cut(s) 140, 513, 540, 1503, 1513
PspOMI GGGCCC 1 cut(s) 1501
PspPI GGNCC 4 cut(s) 531, 556, 1501, 1502
PstNI CAGNNNCTG 2 cut(s) 44, 1478
PsuI RGATCY 2 cut(s) 1232, 1402
PsyI GACNNNGTC 1 cut(s) 40
RsaI GTAC 6 cut(s) 140, 176, 540, 1365, 1742, 1925
RsaNI GTAC 6 cut(s) 139, 175, 539, 1364, 1741, 1924
RseI CAYNNNNRTG 1 cut(s) 402
SapI GCTCTTC 1 cut(s) 1193
SaqAI TTAA 5 cut(s) 282, 425, 495, 1136, 1460
Sau3AI GATC 9 cut(s) 622, 685, 768, 930, 1232, 1402, 1732, 1809, 1968
Sau96I GGNCC 4 cut(s) 531, 556, 1501, 1502
SchI GAGTC 3 cut(s) 50, 889, 1055
ScrFI CCNGG 2 cut(s) 160, 1960
SduI GDGCHC 4 cut(s) 217, 1086, 1505, 1663
SfaNI GCATC 4 cut(s) 1036, 1099, 1282, 1525
SfuI TTCGAA 2 cut(s) 1285, 1559
SinI GGWCC 2 cut(s) 531, 556
SmiI ATTTAAAT 1 cut(s) 496
SmiMI CAYNNNNRTG 1 cut(s) 402
SmlI CTYRAG 2 cut(s) 8, 252
SmoI CTYRAG 2 cut(s) 8, 252
SpeI ACTAGT 1 cut(s) 947
SseBI AGGCCT 1 cut(s) 1781
SspI AATATT 2 cut(s) 55, 1870
SspMI CTAG 8 cut(s) 339, 419, 446, 456, 948, 1314, 1545, 1890
StuI AGGCCT 1 cut(s) 1781
StyD4I CCNGG 2 cut(s) 158, 1958
StyI CCWWGG 2 cut(s) 534, 606
SwaI ATTTAAAT 1 cut(s) 496
TaaI ACNGT 8 cut(s) 268, 981, 1004, 1433, 1712, 1740, 1765, 1923
TaiI ACGT 3 cut(s) 821, 1397, 1660
TaqI TCGA 6 cut(s) 375, 429, 1177, 1285, 1559, 1912
TatI WGTACW 2 cut(s) 1740, 1923
TfiI GAWTC 9 cut(s) 17, 114, 377, 475, 668, 755, 1282, 1375, 1438
Tru1I TTAA 5 cut(s) 282, 425, 495, 1136, 1460
Tru9I TTAA 5 cut(s) 282, 425, 495, 1136, 1460
TscAI CASTG 2 cut(s) 1717, 1926
TseFI GTSAC 1 cut(s) 1417
Tsp45I GTSAC 1 cut(s) 1417
TspDTI ATGAA 4 cut(s) 309, 953, 1388, 1893
TspGWI ACGGA 1 cut(s) 1049
TspRI CASTG 2 cut(s) 1717, 1926
Tth111I GACNNNGTC 1 cut(s) 40
VpaK11BI GGWCC 2 cut(s) 531, 556
XapI RAATTY 7 cut(s) 497, 563, 674, 875, 995, 1209, 1825
XbaI TCTAGA 1 cut(s) 1313
XceI RCATGY 1 cut(s) 710
XcmI CCANNNNNNNNNTGG 1 cut(s) 1670
XmiI GTMKAC 2 cut(s) 738, 1152
XmnI GAANNNNTTC 2 cut(s) 381, 1565
XspI CTAG 8 cut(s) 339, 419, 446, 456, 948, 1314, 1545, 1890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.