Rmu_sc0005791.1_g000018

Cyclic phosphodiesterase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005791.1
Physical Location & Seq
Reverse (-)
95386 .. 97785
2400 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005791.1_g000018.1.cds

Sequence Viewer

Length: 1929 bp
atggcagaggttgatgaagatctggtggagaaaatcctgtcaactctgcctcccaaggctctgatgcgattcaaatgcgcctctaaagggtggtatgcgctggtcaacgatcccaggttcgtagctaagcacctctcctattacaattccaattccaagcgtctgctcctgatgaagaagcgtttagtctccaaggacatcaaagacactgctaatgagactgcagaagaagaagaagaagaagaagagctagtgttttcgttgcttaatttatgcaataatgatgatgatattgataatggtgaggacagcattattgtctctagtgtcgaggacatcaaaattcctttttgtatgagtctaaagactagaggcgaagcagttcatatcgtagggcattgcaatggaatcatctgtctgcttctagttaaatcttttcaggtgcttttatggaacccagcaattcaggaattcaagcttcttcccccctttccataccttccagatgatgattggtatgaagatgtgtggtccaggtatgttcaggggtttggatatgatcctaaattgaacgaatacaaagttgttaacattggactagtttctccttcagaaatgagggatgatggatatgttatttataatcctccaaaggctgcaatatacactttgagtactgattcttggagaaagatcaacaccaatgctttcgaaacagaaaccactgtccttaggcccgaaagtttccagattcaattcaagcaaatgttatattggttaggacatgagcaacataaggaactgattgcgtttgatagatacgaggacctcattgggccggtcatcattttgttggatattgagaatgaggtatttcatgatatcatgttacctgagtgtttatatcatccctgggtcaacactgatggtatggaacttcgagtgtggaacgaatcccctgctctttttgtattggttgttggacttcaaggttataaacctgaagatgaatattcttttgtaatatgggtgctggatgagcttggtggtccgaagggtgcttggacaaaacacttgactcttgatcccacagagaaaccattggcatttttgaatagcaatgagatttttataaatgatttcatgaaacttgtactctcctatgaccttggtagcgaaagcctaaaagattttctcattcaaaacacgccttattctactcgtcagatatgtgacgagtcagatgacattgtagttgttgtctttgtgaaaagtatagtttcagtcttgggagcccacaagctcgagagcagaaataactccagtgcggtgaacttttctccactcacgcactttccatccggtccttccatagtggacagagaattgcattcatattcaatatgggccatcccaccgaatgatgtgtcttttaggatcaagaagttgatggaaggtctcagggctgagttcggtgggccggagatcaaaccacatatcactgttgtggggtctattcgtatgacgtatgaagatgtgctcaacaaatttagatctctccattctaaaaattttcgtgcataccaagcaaaagttaatctagtggttaccagcaatttttatcaccaatgtgtttccctactcattgattcatcaacagaagtatcccatcagttagactgtataactcgcatatgcagtgcacatttgggtttcaataggtctggtaggccatatttgagtctcctttacgggagtctgacagaagaagagaggaatatagctctagaaaaagttagcactctagataaaaacatttccagcttgagcttcaccgtatctcaactcgcagtgtacaaaatcgactacagagatataactctcaaatcatgggaaaaagttgctgaatatgccctcccatttcattag

Protein Analysis

642

Amino Acids

73.53

Weight (kDa)

5.08

Isoelectric Point (pI)

38.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 642, 996, 1133
AciI CCGC 1 cut(s) 1328
AclWI GGATC 4 cut(s) 104, 554, 1079, 1445
AcsI RAATTY 4 cut(s) 342, 470, 1547, 1570
AcuI CTGAAG 2 cut(s) 594, 1023
AfaI GTAC 3 cut(s) 676, 1155, 1856
AfiI CCNNNNNNNGG 1 cut(s) 87
AhlI ACTAGT 1 cut(s) 598
AjnI CCWGG 3 cut(s) 113, 533, 911
AleI CACNNNNGTG 2 cut(s) 1505, 1629
AluBI AGCT 8 cut(s) 125, 250, 478, 1042, 1303, 1784, 1824, 1830
AluI AGCT 8 cut(s) 125, 250, 478, 1042, 1303, 1784, 1824, 1830
Alw21I GWGCWC 2 cut(s) 1542, 1705
Alw26I GTCTC 5 cut(s) 193, 212, 325, 1463, 1748
Alw44I GTGCAC 1 cut(s) 1701
AlwI GGATC 4 cut(s) 104, 554, 1079, 1445
Ama87I CYCGRG 1 cut(s) 1304
AoxI GGCC 5 cut(s) 734, 836, 1407, 1478, 1730
ApaLI GTGCAC 1 cut(s) 1701
ApeKI GCWGC 1 cut(s) 656
ApoI RAATTY 4 cut(s) 342, 470, 1547, 1570
ArsI GACNNNNNNTTYG 2 cut(s) 1412, 1444
Asp700I GAANNNNTTC 1 cut(s) 381
AspLEI GCGC 2 cut(s) 80, 100
AspS9I GGNCC 8 cut(s) 531, 735, 826, 836, 1049, 1364, 1407, 1478
AsuHPI GGTGA 4 cut(s) 314, 1342, 1616, 1825
AsuII TTCGAA 1 cut(s) 711
AvaI CYCGRG 1 cut(s) 1304
AvaII GGWCC 4 cut(s) 531, 826, 1049, 1364
AxyI CCTNAGG 1 cut(s) 731
BaeGI GKGCMC 1 cut(s) 1705
BaeI ACNNNNGTAYC 2 cut(s) 1647, 1680
BanII GRGCYC 1 cut(s) 1297
Bbv12I GWGCWC 2 cut(s) 1542, 1705
BbvI GCAGC 1 cut(s) 643
BccI CCATC 6 cut(s) 620, 920, 1366, 1418, 1444, 1677
BcgI CGANNNNNNTGC 4 cut(s) 57, 91, 941, 975
BciT130I CCWGG 3 cut(s) 115, 535, 913
BciVI GTATCC 1 cut(s) 1675
BcoDI GTCTC 5 cut(s) 193, 212, 325, 1463, 1748
BcuI ACTAGT 1 cut(s) 598
BfaI CTAG 8 cut(s) 251, 324, 369, 425, 599, 1601, 1787, 1805
BfmI CTRYAG 2 cut(s) 222, 1867
BfuI GTATCC 1 cut(s) 1675
BglII AGATCT 2 cut(s) 19, 1553
BisI GCNGC 1 cut(s) 657
BlpI GCTNAGC 1 cut(s) 126
BlsI GCNGC 1 cut(s) 658
BmcAI AGTACT 1 cut(s) 676
Bme1390I CCNGG 3 cut(s) 115, 535, 913
Bme18I GGWCC 4 cut(s) 531, 826, 1049, 1364
BmeT110I CYCGRG 1 cut(s) 1304
BmgT120I GGNCC 8 cut(s) 531, 735, 826, 836, 1049, 1364, 1407, 1478
BmiI GGNNCC 2 cut(s) 455, 1294
BmrFI CCNGG 3 cut(s) 115, 535, 913
BmsI GCATC 1 cut(s) 54
BpmI CTGGAG 1 cut(s) 1306
Bpu1102I GCTNAGC 1 cut(s) 126
Bpu14I TTCGAA 1 cut(s) 711
BpuEI CTTGAG 1 cut(s) 1846
BsaBI GATNNNNATC 1 cut(s) 18
BsaI GGTCTC 1 cut(s) 1463
BsaJI CCNNGG 6 cut(s) 54, 113, 192, 911, 912, 1168
BsaWI WCCGGW 1 cut(s) 1361
BsaXI ACNNNNNCTCC 2 cut(s) 34, 64
Bsc4I CCNNNNNNNGG 1 cut(s) 87
Bse118I RCCGGY 1 cut(s) 838
Bse1I ACTGG 1 cut(s) 1323
Bse21I CCTNAGG 1 cut(s) 731
Bse3DI GCAATG 3 cut(s) 397, 409, 1126
Bse8I GATNNNNATC 1 cut(s) 18
BseBI CCWGG 3 cut(s) 115, 535, 913
BseDI CCNNGG 6 cut(s) 54, 113, 192, 911, 912, 1168
BseGI GGATG 5 cut(s) 628, 907, 1042, 1358, 1410
BseJI GATNNNNATC 1 cut(s) 18
BseLI CCNNNNNNNGG 1 cut(s) 87
BseMI GCAATG 3 cut(s) 397, 409, 1126
BseMII CTCAG 3 cut(s) 885, 1458, 1474
BseNI ACTGG 1 cut(s) 1323
BseSI GKGCMC 1 cut(s) 1705
BseXI GCAGC 1 cut(s) 643
BseYI CCCAGC 1 cut(s) 457
BshFI GGCC 5 cut(s) 736, 838, 1409, 1480, 1732
BsiHKAI GWGCWC 2 cut(s) 1542, 1705
BsiHKCI CYCGRG 1 cut(s) 1304
BsiSI CCGG 3 cut(s) 839, 1362, 1481
BslI CCNNNNNNNGG 1 cut(s) 87
BsmAI GTCTC 5 cut(s) 193, 212, 325, 1463, 1748
BsmI GAATGC 1 cut(s) 1390
BsnI GGCC 5 cut(s) 736, 838, 1409, 1480, 1732
Bso31I GGTCTC 1 cut(s) 1463
BsoBI CYCGRG 1 cut(s) 1304
Bsp119I TTCGAA 1 cut(s) 711
Bsp1286I GDGCHC 3 cut(s) 1297, 1542, 1705
Bsp1407I TGTACA 1 cut(s) 1854
Bsp143I GATC 8 cut(s) 19, 109, 559, 693, 1084, 1437, 1485, 1553
Bsp1720I GCTNAGC 1 cut(s) 126
BspACI CCGC 1 cut(s) 1328
BspANI GGCC 5 cut(s) 736, 838, 1409, 1480, 1732
BspCNI CTCAG 3 cut(s) 886, 1459, 1473
BspHI TCATGA 2 cut(s) 877, 1143
BspLI GGNNCC 2 cut(s) 455, 1294
BspMAI CTGCAG 1 cut(s) 226
BspPI GGATC 4 cut(s) 104, 554, 1079, 1445
BspQI GCTCTTC 1 cut(s) 240
BspT104I TTCGAA 1 cut(s) 711
BspTNI GGTCTC 1 cut(s) 1463
BsrDI GCAATG 3 cut(s) 397, 409, 1126
BsrFI RCCGGY 1 cut(s) 838
BsrGI TGTACA 1 cut(s) 1854
BsrI ACTGG 1 cut(s) 1323
BssAI RCCGGY 1 cut(s) 838
BssECI CCNNGG 6 cut(s) 54, 113, 192, 911, 912, 1168
BssMI GATC 8 cut(s) 19, 109, 559, 693, 1084, 1437, 1485, 1553
BssT1I CCWWGG 3 cut(s) 54, 192, 1168
Bst2UI CCWGG 3 cut(s) 115, 535, 913
Bst4CI ACNGT 4 cut(s) 727, 1504, 1682, 1837
Bst6I CTCTTC 2 cut(s) 240, 1764
BstAUI TGTACA 1 cut(s) 1854
BstBI TTCGAA 1 cut(s) 711
BstDEI CTNAG 5 cut(s) 126, 731, 894, 1460, 1467
BstEII GGTNACC 1 cut(s) 1606
BstF5I GGATG 5 cut(s) 628, 907, 1042, 1358, 1410
BstHHI GCGC 2 cut(s) 80, 100
BstKTI GATC 8 cut(s) 22, 112, 562, 696, 1087, 1440, 1488, 1556
BstMAI GTCTC 5 cut(s) 193, 212, 325, 1463, 1748
BstMBI GATC 8 cut(s) 19, 109, 559, 693, 1084, 1437, 1485, 1553
BstMWI GCNNNNNNNGC 3 cut(s) 1039, 1586, 1910
BstNI CCWGG 3 cut(s) 115, 535, 913
BstPI GGTNACC 1 cut(s) 1606
BstSCI CCNGG 3 cut(s) 113, 533, 911
BstSFI CTRYAG 2 cut(s) 222, 1867
BstSLI GKGCMC 1 cut(s) 1705
BstV1I GCAGC 1 cut(s) 643
BstX2I RGATCY 2 cut(s) 19, 1553
BstYI RGATCY 2 cut(s) 19, 1553
Bsu36I CCTNAGG 1 cut(s) 731
BsuI GTATCC 1 cut(s) 1675
BsuRI GGCC 5 cut(s) 736, 838, 1409, 1480, 1732
BtsCI GGATG 5 cut(s) 628, 907, 1042, 1358, 1410
BtsI GCAGTG 3 cut(s) 207, 1705, 1857
BtsIMutI CAGTG 7 cut(s) 207, 723, 921, 1330, 1500, 1705, 1857
CciI TCATGA 2 cut(s) 877, 1143
CfoI GCGC 2 cut(s) 80, 100
Cfr10I RCCGGY 1 cut(s) 838
Cfr13I GGNCC 8 cut(s) 531, 735, 826, 836, 1049, 1364, 1407, 1478
CseI GACGC 1 cut(s) 149
Csp6I GTAC 3 cut(s) 675, 1154, 1855
CviAII CATG 5 cut(s) 785, 878, 886, 1144, 1890
CviQI GTAC 3 cut(s) 675, 1154, 1855
DdeI CTNAG 5 cut(s) 126, 731, 894, 1460, 1467
DpnI GATC 8 cut(s) 21, 111, 561, 695, 1086, 1439, 1487, 1555
DpnII GATC 8 cut(s) 19, 109, 559, 693, 1084, 1437, 1485, 1553
Eam1104I CTCTTC 2 cut(s) 240, 1764
EarI CTCTTC 2 cut(s) 240, 1764
Eco130I CCWWGG 3 cut(s) 54, 192, 1168
Eco24I GRGCYC 1 cut(s) 1297
Eco31I GGTCTC 1 cut(s) 1463
Eco32I GATATC 1 cut(s) 883
Eco47I GGWCC 4 cut(s) 531, 826, 1049, 1364
Eco57I CTGAAG 2 cut(s) 594, 1023
Eco81I CCTNAGG 1 cut(s) 731
Eco88I CYCGRG 1 cut(s) 1304
Eco91I GGTNACC 1 cut(s) 1606
EcoO109I RGGNCCY 1 cut(s) 826
EcoO65I GGTNACC 1 cut(s) 1606
EcoRI GAATTC 1 cut(s) 470
EcoRII CCWGG 3 cut(s) 113, 533, 911
EcoRV GATATC 1 cut(s) 883
EcoT14I CCWWGG 3 cut(s) 54, 192, 1168
EcoT38I GRGCYC 1 cut(s) 1297
ErhI CCWWGG 3 cut(s) 54, 192, 1168
FaeI CATG 5 cut(s) 788, 881, 889, 1147, 1893
FatI CATG 5 cut(s) 784, 877, 885, 1143, 1889
FauNDI CATATG 1 cut(s) 1694
Fnu4HI GCNGC 1 cut(s) 657
FokI GGATG 5 cut(s) 635, 894, 1049, 1345, 1397
FriOI GRGCYC 1 cut(s) 1297
Fsp4HI GCNGC 1 cut(s) 657
FspBI CTAG 8 cut(s) 251, 324, 369, 425, 599, 1601, 1787, 1805
GlaI GCGC 2 cut(s) 79, 99
GluI GCNGC 1 cut(s) 657
GsaI CCCAGC 1 cut(s) 461
GsuI CTGGAG 1 cut(s) 1306
HaeIII GGCC 5 cut(s) 736, 838, 1409, 1480, 1732
HapII CCGG 3 cut(s) 839, 1362, 1481
HgaI GACGC 1 cut(s) 149
HhaI GCGC 2 cut(s) 80, 100
Hin1II CATG 5 cut(s) 788, 881, 889, 1147, 1893
Hin6I GCGC 2 cut(s) 78, 98
HinP1I GCGC 2 cut(s) 78, 98
HincII GTYRAC 4 cut(s) 42, 106, 589, 919
HindII GTYRAC 4 cut(s) 42, 106, 589, 919
HindIII AAGCTT 1 cut(s) 476
HpaI GTTAAC 1 cut(s) 589
HpaII CCGG 3 cut(s) 839, 1362, 1481
HphI GGTGA 4 cut(s) 314, 1342, 1616, 1825
Hpy166II GTNNAC 8 cut(s) 42, 106, 589, 919, 1333, 1378, 1703, 1855
Hpy188I TCNGA 6 cut(s) 63, 613, 1053, 1227, 1243, 1761
Hpy8I GTNNAC 8 cut(s) 42, 106, 589, 919, 1333, 1378, 1703, 1855
HpyAV CCTTC 5 cut(s) 509, 618, 1048, 1377, 1448
HpyCH4III ACNGT 4 cut(s) 727, 1504, 1682, 1837
HpyCH4IV ACGT 1 cut(s) 1526
HpyCH4V TGCA 8 cut(s) 224, 276, 402, 659, 1390, 1580, 1698, 1703
HpyF10VI GCNNNNNNNGC 3 cut(s) 1039, 1586, 1910
HpyF3I CTNAG 5 cut(s) 126, 731, 894, 1460, 1467
HpySE526I ACGT 1 cut(s) 1526
Hsp92II CATG 5 cut(s) 788, 881, 889, 1147, 1893
HspAI GCGC 2 cut(s) 78, 98
KspAI GTTAAC 1 cut(s) 589
Kzo9I GATC 8 cut(s) 19, 109, 559, 693, 1084, 1437, 1485, 1553
LguI GCTCTTC 1 cut(s) 240
LmnI GCTCC 2 cut(s) 171, 1292
Lsp1109I GCAGC 1 cut(s) 643
LweI GCATC 1 cut(s) 54
MaeI CTAG 8 cut(s) 251, 324, 369, 425, 599, 1601, 1787, 1805
MaeII ACGT 1 cut(s) 1526
MaeIII GTNAC 3 cut(s) 888, 1232, 1606
MalI GATC 8 cut(s) 21, 111, 561, 695, 1086, 1439, 1487, 1555
MboI GATC 8 cut(s) 19, 109, 559, 693, 1084, 1437, 1485, 1553
MflI RGATCY 2 cut(s) 19, 1553
MhlI GDGCHC 3 cut(s) 1297, 1542, 1705
MlyI GAGTC 5 cut(s) 367, 1072, 1247, 1750, 1765
MmeI TCCRAC 2 cut(s) 834, 961
MroXI GAANNNNTTC 1 cut(s) 381
MseI TTAA 4 cut(s) 267, 429, 588, 1596
MslI CAYNNNNRTG 3 cut(s) 402, 1505, 1629
MspI CCGG 3 cut(s) 839, 1362, 1481
MspR9I CCNGG 3 cut(s) 115, 535, 913
Mva1269I GAATGC 1 cut(s) 1390
MvaI CCWGG 3 cut(s) 115, 535, 913
MwoI GCNNNNNNNGC 3 cut(s) 1039, 1586, 1910
NdeI CATATG 1 cut(s) 1694
NdeII GATC 8 cut(s) 19, 109, 559, 693, 1084, 1437, 1485, 1553
NlaIII CATG 5 cut(s) 788, 881, 889, 1147, 1893
NlaIV GGNNCC 2 cut(s) 455, 1294
NmuCI GTSAC 1 cut(s) 1232
NspV TTCGAA 1 cut(s) 711
OliI CACNNNNGTG 2 cut(s) 1505, 1629
PaeR7I CTCGAG 1 cut(s) 1304
PagI TCATGA 2 cut(s) 877, 1143
PasI CCCWGGG 1 cut(s) 912
PciSI GCTCTTC 1 cut(s) 240
PctI GAATGC 1 cut(s) 1390
PdmI GAANNNNTTC 1 cut(s) 381
PfeI GAWTC 6 cut(s) 69, 408, 680, 751, 953, 1649
PkrI GCNGC 1 cut(s) 658
PleI GAGTC 5 cut(s) 366, 1072, 1246, 1749, 1764
PpsI GAGTC 5 cut(s) 366, 1072, 1246, 1749, 1764
PpuMI RGGWCCY 1 cut(s) 826
PsiI TTATAA 3 cut(s) 642, 996, 1133
Psp5II RGGWCCY 1 cut(s) 826
Psp6I CCWGG 3 cut(s) 113, 533, 911
PspEI GGTNACC 1 cut(s) 1606
PspFI CCCAGC 1 cut(s) 457
PspGI CCWGG 3 cut(s) 113, 533, 911
PspN4I GGNNCC 2 cut(s) 455, 1294
PspPI GGNCC 8 cut(s) 531, 735, 826, 836, 1049, 1364, 1407, 1478
PspPPI RGGWCCY 1 cut(s) 826
PstI CTGCAG 1 cut(s) 226
PsuI RGATCY 2 cut(s) 19, 1553
RsaI GTAC 3 cut(s) 676, 1155, 1856
RsaNI GTAC 3 cut(s) 675, 1154, 1855
RseI CAYNNNNRTG 3 cut(s) 402, 1505, 1629
SapI GCTCTTC 1 cut(s) 240
SaqAI TTAA 4 cut(s) 267, 429, 588, 1596
SatI GCNGC 1 cut(s) 657
Sau3AI GATC 8 cut(s) 19, 109, 559, 693, 1084, 1437, 1485, 1553
Sau96I GGNCC 8 cut(s) 531, 735, 826, 836, 1049, 1364, 1407, 1478
ScaI AGTACT 1 cut(s) 676
SchI GAGTC 5 cut(s) 367, 1072, 1247, 1750, 1765
ScrFI CCNGG 3 cut(s) 115, 535, 913
SduI GDGCHC 3 cut(s) 1297, 1542, 1705
SfaNI GCATC 1 cut(s) 54
SfcI CTRYAG 2 cut(s) 222, 1867
Sfr274I CTCGAG 1 cut(s) 1304
SfuI TTCGAA 1 cut(s) 711
SinI GGWCC 4 cut(s) 531, 826, 1049, 1364
SlaI CTCGAG 1 cut(s) 1304
SmiMI CAYNNNNRTG 3 cut(s) 402, 1505, 1629
SmlI CTYRAG 2 cut(s) 1304, 1825
SmoI CTYRAG 2 cut(s) 1304, 1825
SpeI ACTAGT 1 cut(s) 598
SsiI CCGC 1 cut(s) 1328
SspI AATATT 1 cut(s) 1013
SspMI CTAG 8 cut(s) 251, 324, 369, 425, 599, 1601, 1787, 1805
StyD4I CCNGG 3 cut(s) 113, 533, 911
StyI CCWWGG 3 cut(s) 54, 192, 1168
TaaI ACNGT 4 cut(s) 727, 1504, 1682, 1837
TaiI ACGT 1 cut(s) 1529
TaqI TCGA 5 cut(s) 330, 711, 940, 1305, 1863
TatI WGTACW 3 cut(s) 674, 1153, 1854
TfiI GAWTC 6 cut(s) 69, 408, 680, 751, 953, 1649
Tru1I TTAA 4 cut(s) 267, 429, 588, 1596
Tru9I TTAA 4 cut(s) 267, 429, 588, 1596
TscAI CASTG 7 cut(s) 214, 730, 928, 1330, 1507, 1705, 1857
TseFI GTSAC 1 cut(s) 1232
TseI GCWGC 1 cut(s) 656
Tsp45I GTSAC 1 cut(s) 1232
TspRI CASTG 7 cut(s) 214, 730, 928, 1330, 1507, 1705, 1857
VneI GTGCAC 1 cut(s) 1701
VpaK11BI GGWCC 4 cut(s) 531, 826, 1049, 1364
XapI RAATTY 4 cut(s) 342, 470, 1547, 1570
XbaI TCTAGA 2 cut(s) 1786, 1804
XcmI CCANNNNNNNNNTGG 1 cut(s) 510
XhoI CTCGAG 1 cut(s) 1304
XmnI GAANNNNTTC 1 cut(s) 381
XspI CTAG 8 cut(s) 251, 324, 369, 425, 599, 1601, 1787, 1805
ZrmI AGTACT 1 cut(s) 676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.