FvH4_6g06663

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
3908721 .. 3910433
1713 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g06663.t1

Sequence Viewer

Length: 1236 bp
ATGCTCACCTTTCATCAATCAATATATGGTCATATACCAACTTCGATTATGGCCATGCAAATCCTGTCAAGGCTACCTCCCCAATCTCTTATGCGATTCAAGGGTGTTCGTAAGTCCTGGTGTACTATGATCAACAATCCCAAATTCATTGCCAAGCACCTATCCAATTCCATGCATAACCATTCCTCCACTTGTGTCCTTTACAAGCTATCGACACTCAAGAACAACACCACAAGAGACAATGACGAGAAGGAAACTGTATTCTCTTTGCTTACATTTTGCAATGATGATCGGAAGGAGCATATCGTTCATTATGTTGGCGATGATGTTACGAAGAATCAATTTGTTGGGATCACGGCGAAGGATCTTGAATCTGTATGGATTATAGGCCAGTGTGATGGGATTATTTGCCTAGCTGATTCTAGTAAAGTAATTTTATGGAATCCAGCTATTAGGGAATCCAAGCTTCTTAACCTTGAGTCTTATCCGGATCAGGTCATGACTTCTCTTGGCTTTGGTTATGATCCAAAGTCAGAAGATTACAAGGTTATTTACATTGGAAAGCCTGATGAGGAGGAATATGGTGATGGTCACCTCCTTAATAATCCTCCCACCGTTCAAGTATACACCTTAGGCACTAACTCTTGGAGAGAGATCAAGAGCGGCTCCTTGGAAACAGAAACTACTAATATCTGGCCTGAGGAATTCGATATATACTTCAAGGGATTTTGTTATTGGAGAGGAAGGGAGCAAATAAAGGAGTTCGACAATTTTTGTGACAGAAATGAGGAGGAATATGTGAGGCAATTTATCGTATCGTTTGATACGGTTGATGAGGTATTTCATCGTATATTGTTTCCGGATAGTTTATACGAGTCATTTGTGTGTTGGTATTCTAATATGAACGTTGTAGTTTGGAATGAATCCGTTGCTCTTTTTGGCATGGATTATGGTATATTCCGAGATTGTTCACGGGTATTATGGGTGATGGAAGACTTTGATGGAGTAGCTAAAGGTTCCTGGATAAAGCAGTTCATCTTTAGGACAGCGGTGGGACTTGAGAAACCATTGCAGTTTTGGAATAGGGATGAGATTCTTTTGGTTTCTGAAGGGAGTTTAGTCTCTTGCAACATTGATACCGGAGAGCTCAAGCAACTCCCCATTCCTAACATGGATTTTGATCATTTGGAAGCTGCTGTTTATGTTAATAGTATAGTTCCGATTTTGGGAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

412

Amino Acids

47.57

Weight (kDa)

5.01

Isoelectric Point (pI)

35.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 110 - 347 9.9e-19 F-box associated beta propeller domain
FBA_1 PF07734 128 - 381 1.4e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 663
AccI GTMKAC 1 cut(s) 624
AccIII TCCGGA 2 cut(s) 487, 859
AciI CCGC 2 cut(s) 663, 1049
AclI AACGTT 1 cut(s) 906
AclWI GGATC 4 cut(s) 359, 372, 498, 518
AcoI YGGCCR 1 cut(s) 51
AcsI RAATTY 2 cut(s) 143, 704
AcuI CTGAAG 1 cut(s) 1128
AfaI GTAC 1 cut(s) 124
AfiI CCNNNNNNNGG 1 cut(s) 1226
AgsI TTSAA 4 cut(s) 100, 371, 620, 721
AjnI CCWGG 2 cut(s) 116, 1019
AluBI AGCT 7 cut(s) 208, 416, 449, 466, 1010, 1147, 1193
AluI AGCT 7 cut(s) 208, 416, 449, 466, 1010, 1147, 1193
Alw21I GWGCWC 1 cut(s) 1149
Alw26I GTCTC 2 cut(s) 231, 1126
AlwI GGATC 4 cut(s) 359, 372, 498, 518
Aor13HI TCCGGA 2 cut(s) 487, 859
AoxI GGCC 3 cut(s) 51, 388, 695
ApeKI GCWGC 1 cut(s) 1193
ApoI RAATTY 2 cut(s) 143, 704
AsuHPI GGTGA 3 cut(s) 584, 596, 997
AxyI CCTNAGG 2 cut(s) 631, 699
BalI TGGCCA 1 cut(s) 53
BanII GRGCYC 1 cut(s) 1149
BbsI GAAGAC 1 cut(s) 999
Bbv12I GWGCWC 1 cut(s) 1149
BbvI GCAGC 1 cut(s) 1180
BccI CCATC 4 cut(s) 392, 581, 982, 995
BceAI ACGGC 1 cut(s) 372
BciT130I CCWGG 2 cut(s) 118, 1021
BclI TGATCA 2 cut(s) 129, 1180
BcoDI GTCTC 2 cut(s) 231, 1126
BfaI CTAG 2 cut(s) 413, 423
BisI GCNGC 2 cut(s) 664, 1194
BlsI GCNGC 2 cut(s) 665, 1195
Bme1390I CCNGG 2 cut(s) 118, 1021
BmiI GGNNCC 2 cut(s) 667, 1018
BmrFI CCNGG 2 cut(s) 118, 1021
BpiI GAAGAC 1 cut(s) 999
BpuEI CTTGAG 4 cut(s) 203, 497, 1079, 1133
BsaBI GATNNNNATC 1 cut(s) 1179
BsaJI CCNNGG 1 cut(s) 669
BsaWI WCCGGW 3 cut(s) 487, 859, 1139
BsaXI ACNNNNNCTCC 2 cut(s) 170, 200
Bsc4I CCNNNNNNNGG 1 cut(s) 1226
Bse1I ACTGG 1 cut(s) 391
Bse21I CCTNAGG 2 cut(s) 631, 699
Bse3DI GCAATG 3 cut(s) 147, 289, 1067
Bse8I GATNNNNATC 1 cut(s) 1179
BseAI TCCGGA 2 cut(s) 487, 859
BseBI CCWGG 2 cut(s) 118, 1021
BseDI CCNNGG 1 cut(s) 669
BseGI GGATG 1 cut(s) 1093
BseJI GATNNNNATC 1 cut(s) 1179
BseLI CCNNNNNNNGG 1 cut(s) 1226
BseMI GCAATG 3 cut(s) 147, 289, 1067
BseMII CTCAG 1 cut(s) 690
BseNI ACTGG 1 cut(s) 391
BseRI GAGGAG 2 cut(s) 587, 803
BseXI GCAGC 1 cut(s) 1180
BshFI GGCC 3 cut(s) 53, 390, 697
BsiHKAI GWGCWC 1 cut(s) 1149
BsiSI CCGG 3 cut(s) 488, 860, 1140
BslFI GGGAC 1 cut(s) 1068
BslI CCNNNNNNNGG 1 cut(s) 1226
BsmAI GTCTC 2 cut(s) 231, 1126
BsmFI GGGAC 1 cut(s) 1068
BsnI GGCC 3 cut(s) 53, 390, 697
Bsp1286I GDGCHC 1 cut(s) 1149
Bsp13I TCCGGA 2 cut(s) 487, 859
Bsp143I GATC 8 cut(s) 129, 289, 351, 364, 490, 523, 654, 1180
BspACI CCGC 2 cut(s) 663, 1049
BspANI GGCC 3 cut(s) 53, 390, 697
BspCNI CTCAG 1 cut(s) 691
BspEI TCCGGA 2 cut(s) 487, 859
BspHI TCATGA 1 cut(s) 498
BspLI GGNNCC 2 cut(s) 667, 1018
BspPI GGATC 4 cut(s) 359, 372, 498, 518
BsrBI CCGCTC 1 cut(s) 663
BsrDI GCAATG 3 cut(s) 147, 289, 1067
BsrI ACTGG 1 cut(s) 391
BssECI CCNNGG 1 cut(s) 669
BssMI GATC 8 cut(s) 129, 289, 351, 364, 490, 523, 654, 1180
BssNAI GTATAC 1 cut(s) 625
BssT1I CCWWGG 1 cut(s) 669
Bst1107I GTATAC 1 cut(s) 625
Bst2UI CCWGG 2 cut(s) 118, 1021
Bst4CI ACNGT 3 cut(s) 259, 616, 829
BstDEI CTNAG 2 cut(s) 631, 699
BstEII GGTNACC 1 cut(s) 590
BstF5I GGATG 1 cut(s) 1093
BstKTI GATC 8 cut(s) 132, 292, 354, 367, 493, 526, 657, 1183
BstMAI GTCTC 2 cut(s) 231, 1126
BstMBI GATC 8 cut(s) 129, 289, 351, 364, 490, 523, 654, 1180
BstNI CCWGG 2 cut(s) 118, 1021
BstPI GGTNACC 1 cut(s) 590
BstSCI CCNGG 2 cut(s) 116, 1019
BstV1I GCAGC 1 cut(s) 1180
BstV2I GAAGAC 1 cut(s) 999
BstX2I RGATCY 1 cut(s) 364
BstXI CCANNNNNNTGG 1 cut(s) 398
BstYI RGATCY 1 cut(s) 364
BstZ17I GTATAC 1 cut(s) 625
Bsu36I CCTNAGG 2 cut(s) 631, 699
BsuRI GGCC 3 cut(s) 53, 390, 697
BtgZI GCGATG 1 cut(s) 336
BtsCI GGATG 1 cut(s) 1093
BtsIMutI CAGTG 1 cut(s) 398
CciI TCATGA 1 cut(s) 498
Csp6I GTAC 1 cut(s) 123
CviAII CATG 5 cut(s) 55, 172, 499, 943, 1171
CviQI GTAC 1 cut(s) 123
DdeI CTNAG 2 cut(s) 631, 699
DpnI GATC 8 cut(s) 131, 291, 353, 366, 492, 525, 656, 1182
DpnII GATC 8 cut(s) 129, 289, 351, 364, 490, 523, 654, 1180
EaeI YGGCCR 1 cut(s) 51
Ecl136II GAGCTC 1 cut(s) 1147
Eco130I CCWWGG 1 cut(s) 669
Eco24I GRGCYC 1 cut(s) 1149
Eco53kI GAGCTC 1 cut(s) 1147
Eco57I CTGAAG 1 cut(s) 1128
Eco81I CCTNAGG 2 cut(s) 631, 699
Eco91I GGTNACC 1 cut(s) 590
EcoICRI GAGCTC 1 cut(s) 1147
EcoO65I GGTNACC 1 cut(s) 590
EcoRI GAATTC 1 cut(s) 704
EcoRII CCWGG 2 cut(s) 116, 1019
EcoT14I CCWWGG 1 cut(s) 669
EcoT22I ATGCAT 1 cut(s) 177
EcoT38I GRGCYC 1 cut(s) 1149
ErhI CCWWGG 1 cut(s) 669
FaeI CATG 5 cut(s) 58, 175, 502, 946, 1174
FaqI GGGAC 1 cut(s) 1068
FatI CATG 5 cut(s) 54, 171, 498, 942, 1170
FbaI TGATCA 2 cut(s) 129, 1180
FblI GTMKAC 1 cut(s) 624
Fnu4HI GCNGC 2 cut(s) 664, 1194
FokI GGATG 1 cut(s) 1100
FriOI GRGCYC 1 cut(s) 1149
Fsp4HI GCNGC 2 cut(s) 664, 1194
FspBI CTAG 2 cut(s) 413, 423
GluI GCNGC 2 cut(s) 664, 1194
HaeIII GGCC 3 cut(s) 53, 390, 697
HapII CCGG 3 cut(s) 488, 860, 1140
Hin1II CATG 5 cut(s) 58, 175, 502, 946, 1174
HindIII AAGCTT 1 cut(s) 464
HpaII CCGG 3 cut(s) 488, 860, 1140
HphI GGTGA 3 cut(s) 584, 596, 997
Hpy166II GTNNAC 3 cut(s) 123, 625, 971
Hpy188I TCNGA 5 cut(s) 294, 535, 962, 1108, 1221
Hpy188III TCNNGA 6 cut(s) 220, 368, 488, 499, 658, 860
Hpy8I GTNNAC 3 cut(s) 123, 625, 971
HpyAV CCTTC 6 cut(s) 244, 289, 355, 738, 1103, 1224
HpyCH4III ACNGT 3 cut(s) 259, 616, 829
HpyCH4IV ACGT 1 cut(s) 906
HpyCH4V TGCA 5 cut(s) 58, 175, 282, 1072, 1128
HpyF3I CTNAG 2 cut(s) 631, 699
HpySE526I ACGT 1 cut(s) 906
Hsp92II CATG 5 cut(s) 58, 175, 502, 946, 1174
Kpn2I TCCGGA 2 cut(s) 487, 859
Ksp22I TGATCA 2 cut(s) 129, 1180
Kzo9I GATC 8 cut(s) 129, 289, 351, 364, 490, 523, 654, 1180
LmnI GCTCC 3 cut(s) 298, 671, 748
Lsp1109I GCAGC 1 cut(s) 1180
MaeI CTAG 2 cut(s) 413, 423
MaeII ACGT 1 cut(s) 906
MaeIII GTNAC 3 cut(s) 328, 590, 776
MalI GATC 8 cut(s) 131, 291, 353, 366, 492, 525, 656, 1182
MbiI CCGCTC 1 cut(s) 663
MboI GATC 8 cut(s) 129, 289, 351, 364, 490, 523, 654, 1180
MboII GAAGA 3 cut(s) 346, 548, 1004
MflI RGATCY 1 cut(s) 364
MhlI GDGCHC 1 cut(s) 1149
MlsI TGGCCA 1 cut(s) 53
MluCI AATT 7 cut(s) 143, 166, 341, 432, 704, 769, 806
MluNI TGGCCA 1 cut(s) 53
MlyI GAGTC 2 cut(s) 488, 884
Mox20I TGGCCA 1 cut(s) 53
Mph1103I ATGCAT 1 cut(s) 177
MroI TCCGGA 2 cut(s) 487, 859
MscI TGGCCA 1 cut(s) 53
MseI TTAA 3 cut(s) 471, 600, 1206
MslI CAYNNNNRTG 1 cut(s) 883
Msp20I TGGCCA 1 cut(s) 53
MspA1I CMGCKG 1 cut(s) 1049
MspI CCGG 3 cut(s) 488, 860, 1140
MspR9I CCNGG 2 cut(s) 118, 1021
MvaI CCWGG 2 cut(s) 118, 1021
NdeII GATC 8 cut(s) 129, 289, 351, 364, 490, 523, 654, 1180
NlaIII CATG 5 cut(s) 58, 175, 502, 946, 1174
NlaIV GGNNCC 2 cut(s) 667, 1018
NmuCI GTSAC 2 cut(s) 590, 776
NsiI ATGCAT 1 cut(s) 177
PagI TCATGA 1 cut(s) 498
PfeI GAWTC 8 cut(s) 96, 337, 371, 419, 442, 458, 923, 1093
PfoI TCCNGGA 1 cut(s) 1019
PkrI GCNGC 2 cut(s) 665, 1195
PleI GAGTC 2 cut(s) 487, 883
PpsI GAGTC 2 cut(s) 487, 883
Psp124BI GAGCTC 1 cut(s) 1149
Psp1406I AACGTT 1 cut(s) 906
Psp6I CCWGG 2 cut(s) 116, 1019
PspEI GGTNACC 1 cut(s) 590
PspGI CCWGG 2 cut(s) 116, 1019
PspN4I GGNNCC 2 cut(s) 667, 1018
PsuI RGATCY 1 cut(s) 364
RsaI GTAC 1 cut(s) 124
RsaNI GTAC 1 cut(s) 123
RseI CAYNNNNRTG 1 cut(s) 883
SacI GAGCTC 1 cut(s) 1149
SaqAI TTAA 3 cut(s) 471, 600, 1206
SatI GCNGC 2 cut(s) 664, 1194
Sau3AI GATC 8 cut(s) 129, 289, 351, 364, 490, 523, 654, 1180
SchI GAGTC 2 cut(s) 488, 884
ScrFI CCNGG 2 cut(s) 118, 1021
SduI GDGCHC 1 cut(s) 1149
SmiMI CAYNNNNRTG 1 cut(s) 883
SmlI CTYRAG 4 cut(s) 218, 476, 1058, 1148
SmoI CTYRAG 4 cut(s) 218, 476, 1058, 1148
Sse9I AATT 7 cut(s) 143, 166, 341, 432, 704, 769, 806
SsiI CCGC 2 cut(s) 663, 1049
SspMI CTAG 2 cut(s) 413, 423
SstI GAGCTC 1 cut(s) 1149
StyD4I CCNGG 2 cut(s) 116, 1019
StyI CCWWGG 1 cut(s) 669
TaaI ACNGT 3 cut(s) 259, 616, 829
TaiI ACGT 1 cut(s) 909
TaqI TCGA 4 cut(s) 44, 212, 708, 765
TasI AATT 7 cut(s) 143, 166, 341, 432, 704, 769, 806
TatI WGTACW 1 cut(s) 122
TauI GCSGC 1 cut(s) 666
TfiI GAWTC 8 cut(s) 96, 337, 371, 419, 442, 458, 923, 1093
Tru1I TTAA 3 cut(s) 471, 600, 1206
Tru9I TTAA 3 cut(s) 471, 600, 1206
TscAI CASTG 1 cut(s) 398
TseFI GTSAC 2 cut(s) 590, 776
TseI GCWGC 1 cut(s) 1193
Tsp45I GTSAC 2 cut(s) 590, 776
TspDTI ATGAA 6 cut(s) 136, 299, 833, 917, 936, 1024
TspGWI ACGGA 1 cut(s) 916
TspRI CASTG 1 cut(s) 398
XapI RAATTY 2 cut(s) 143, 704
XcmI CCANNNNNNNNNTGG 2 cut(s) 1074, 1168
XmiI GTMKAC 1 cut(s) 624
XspI CTAG 2 cut(s) 413, 423
Zsp2I ATGCAT 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.