Cyclic phosphodiesterase-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 454 |
| AccI | GTMKAC | 1 cut(s) | 519 |
| AccII | CGCG | 1 cut(s) | 333 |
| AclWI | GGATC | 3 cut(s) | 165, 333, 597 |
| AcoI | YGGCCR | 1 cut(s) | 392 |
| AcyI | GRCGYC | 1 cut(s) | 451 |
| AfaI | GTAC | 1 cut(s) | 355 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 618 |
| AflII | CTTAAG | 1 cut(s) | 311 |
| AflIII | ACRYGT | 1 cut(s) | 331 |
| AgsI | TTSAA | 2 cut(s) | 91, 383 |
| AjnI | CCWGG | 1 cut(s) | 617 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 88, 120 |
| AluBI | AGCT | 4 cut(s) | 152, 707, 747, 753 |
| AluI | AGCT | 4 cut(s) | 152, 707, 747, 753 |
| AlwI | GGATC | 3 cut(s) | 165, 333, 597 |
| Ama87I | CYCGRG | 1 cut(s) | 708 |
| AoxI | GGCC | 2 cut(s) | 65, 392 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 321, 353 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 135 |
| AspLEI | GCGC | 2 cut(s) | 228, 666 |
| AsuHPI | GGTGA | 1 cut(s) | 557 |
| AvaI | CYCGRG | 1 cut(s) | 708 |
| AxyI | CCTNAGG | 1 cut(s) | 69 |
| BaeGI | GKGCMC | 1 cut(s) | 239 |
| BccI | CCATC | 3 cut(s) | 502, 570, 580 |
| BciT130I | CCWGG | 1 cut(s) | 619 |
| BclI | TGATCA | 2 cut(s) | 183, 538 |
| BfaI | CTAG | 2 cut(s) | 552, 744 |
| BfrI | CTTAAG | 1 cut(s) | 311 |
| Bme1390I | CCNGG | 1 cut(s) | 619 |
| BmeT110I | CYCGRG | 1 cut(s) | 708 |
| BmrFI | CCNGG | 1 cut(s) | 619 |
| BmsI | GCATC | 1 cut(s) | 493 |
| BpmI | CTGGAG | 1 cut(s) | 640 |
| BpuEI | CTTGAG | 1 cut(s) | 769 |
| Bsa29I | ATCGAT | 2 cut(s) | 160, 219 |
| BsaHI | GRCGYC | 1 cut(s) | 451 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 618 |
| Bse1I | ACTGG | 1 cut(s) | 568 |
| Bse21I | CCTNAGG | 1 cut(s) | 69 |
| BseBI | CCWGG | 1 cut(s) | 619 |
| BseCI | ATCGAT | 2 cut(s) | 160, 219 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 618 |
| BseMII | CTCAG | 3 cut(s) | 234, 456, 501 |
| BseNI | ACTGG | 1 cut(s) | 568 |
| BseRI | GAGGAG | 1 cut(s) | 659 |
| BseSI | GKGCMC | 1 cut(s) | 239 |
| BseYI | CCCAGC | 1 cut(s) | 109 |
| Bsh1236I | CGCG | 1 cut(s) | 333 |
| BshFI | GGCC | 2 cut(s) | 67, 394 |
| BshVI | ATCGAT | 2 cut(s) | 160, 219 |
| BsiHKCI | CYCGRG | 1 cut(s) | 708 |
| BsiSI | CCGG | 1 cut(s) | 391 |
| BslFI | GGGAC | 1 cut(s) | 462 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 618 |
| BsmFI | GGGAC | 1 cut(s) | 462 |
| BsnI | GGCC | 2 cut(s) | 67, 394 |
| BsoBI | CYCGRG | 1 cut(s) | 708 |
| Bsp1286I | GDGCHC | 1 cut(s) | 239 |
| Bsp143I | GATC | 5 cut(s) | 157, 183, 325, 538, 589 |
| BspANI | GGCC | 2 cut(s) | 67, 394 |
| BspCNI | CTCAG | 3 cut(s) | 235, 457, 500 |
| BspDI | ATCGAT | 2 cut(s) | 160, 219 |
| BspFNI | CGCG | 1 cut(s) | 333 |
| BspPI | GGATC | 3 cut(s) | 165, 333, 597 |
| BspTI | CTTAAG | 1 cut(s) | 311 |
| BsrI | ACTGG | 1 cut(s) | 568 |
| BssMI | GATC | 5 cut(s) | 157, 183, 325, 538, 589 |
| BssNI | GRCGYC | 1 cut(s) | 451 |
| Bst2UI | CCWGG | 1 cut(s) | 619 |
| Bst4CI | ACNGT | 2 cut(s) | 34, 647 |
| Bst6I | CTCTTC | 2 cut(s) | 521, 687 |
| BstACI | GRCGYC | 1 cut(s) | 451 |
| BstAFI | CTTAAG | 1 cut(s) | 311 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 234 |
| BstDEI | CTNAG | 7 cut(s) | 15, 69, 243, 279, 357, 465, 487 |
| BstFNI | CGCG | 1 cut(s) | 333 |
| BstHHI | GCGC | 2 cut(s) | 228, 666 |
| BstKTI | GATC | 5 cut(s) | 160, 186, 328, 541, 592 |
| BstMBI | GATC | 5 cut(s) | 157, 183, 325, 538, 589 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 234, 339, 661 |
| BstNI | CCWGG | 1 cut(s) | 619 |
| BstSCI | CCNGG | 1 cut(s) | 617 |
| BstSLI | GKGCMC | 1 cut(s) | 239 |
| BstUI | CGCG | 1 cut(s) | 333 |
| Bsu15I | ATCGAT | 2 cut(s) | 160, 219 |
| Bsu36I | CCTNAGG | 1 cut(s) | 69 |
| BsuRI | GGCC | 2 cut(s) | 67, 394 |
| BsuTUI | ATCGAT | 2 cut(s) | 160, 219 |
| BtgZI | GCGATG | 1 cut(s) | 521 |
| BtsIMutI | CAGTG | 1 cut(s) | 575 |
| CfoI | GCGC | 2 cut(s) | 228, 666 |
| ClaI | ATCGAT | 2 cut(s) | 160, 219 |
| CseI | GACGC | 1 cut(s) | 339 |
| Csp6I | GTAC | 1 cut(s) | 354 |
| CviAII | CATG | 4 cut(s) | 229, 433, 445, 652 |
| CviQI | GTAC | 1 cut(s) | 354 |
| DdeI | CTNAG | 7 cut(s) | 15, 69, 243, 279, 357, 465, 487 |
| DpnI | GATC | 5 cut(s) | 159, 185, 327, 540, 591 |
| DpnII | GATC | 5 cut(s) | 157, 183, 325, 538, 589 |
| EaeI | YGGCCR | 1 cut(s) | 392 |
| Eam1104I | CTCTTC | 2 cut(s) | 521, 687 |
| EarI | CTCTTC | 2 cut(s) | 521, 687 |
| Eco81I | CCTNAGG | 1 cut(s) | 69 |
| Eco88I | CYCGRG | 1 cut(s) | 708 |
| EcoRII | CCWGG | 1 cut(s) | 617 |
| FaeI | CATG | 4 cut(s) | 232, 436, 448, 655 |
| FaqI | GGGAC | 1 cut(s) | 462 |
| FatI | CATG | 4 cut(s) | 228, 432, 444, 651 |
| FbaI | TGATCA | 2 cut(s) | 183, 538 |
| FblI | GTMKAC | 1 cut(s) | 519 |
| FspBI | CTAG | 2 cut(s) | 552, 744 |
| GlaI | GCGC | 2 cut(s) | 227, 665 |
| GsaI | CCCAGC | 1 cut(s) | 113 |
| GsuI | CTGGAG | 1 cut(s) | 640 |
| HaeIII | GGCC | 2 cut(s) | 67, 394 |
| HapII | CCGG | 1 cut(s) | 391 |
| HgaI | GACGC | 1 cut(s) | 339 |
| HhaI | GCGC | 2 cut(s) | 228, 666 |
| Hin1I | GRCGYC | 1 cut(s) | 451 |
| Hin1II | CATG | 4 cut(s) | 232, 436, 448, 655 |
| Hin6I | GCGC | 2 cut(s) | 226, 664 |
| HinP1I | GCGC | 2 cut(s) | 226, 664 |
| HincII | GTYRAC | 4 cut(s) | 213, 252, 319, 684 |
| HindII | GTYRAC | 4 cut(s) | 213, 252, 319, 684 |
| HinfI | GANTC | 2 cut(s) | 11, 622 |
| HpaI | GTTAAC | 2 cut(s) | 213, 252 |
| HpaII | CCGG | 1 cut(s) | 391 |
| HphI | GGTGA | 1 cut(s) | 557 |
| Hpy166II | GTNNAC | 5 cut(s) | 213, 252, 319, 520, 684 |
| Hpy188I | TCNGA | 2 cut(s) | 490, 807 |
| Hpy188III | TCNNGA | 4 cut(s) | 79, 593, 710, 728 |
| Hpy8I | GTNNAC | 5 cut(s) | 213, 252, 319, 520, 684 |
| Hpy99I | CGWCG | 4 cut(s) | 305, 333, 456, 797 |
| HpyCH4III | ACNGT | 2 cut(s) | 34, 647 |
| HpyCH4IV | ACGT | 2 cut(s) | 56, 451 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 234, 339, 661 |
| HpyF3I | CTNAG | 7 cut(s) | 15, 69, 243, 279, 357, 465, 487 |
| HpySE526I | ACGT | 2 cut(s) | 56, 451 |
| Hsp92I | GRCGYC | 1 cut(s) | 451 |
| Hsp92II | CATG | 4 cut(s) | 232, 436, 448, 655 |
| HspAI | GCGC | 2 cut(s) | 226, 664 |
| Ksp22I | TGATCA | 2 cut(s) | 183, 538 |
| KspAI | GTTAAC | 2 cut(s) | 213, 252 |
| Kzo9I | GATC | 5 cut(s) | 157, 183, 325, 538, 589 |
| LmnI | GCTCC | 1 cut(s) | 297 |
| LpnPI | CCDG | 9 cut(s) | 92, 95, 297, 404, 477, 527, 581, 604, 631 |
| LweI | GCATC | 1 cut(s) | 493 |
| MaeI | CTAG | 2 cut(s) | 552, 744 |
| MaeII | ACGT | 2 cut(s) | 56, 451 |
| MaeIII | GTNAC | 2 cut(s) | 547, 760 |
| MalI | GATC | 5 cut(s) | 159, 185, 327, 540, 591 |
| MboI | GATC | 5 cut(s) | 157, 183, 325, 538, 589 |
| MboII | GAAGA | 6 cut(s) | 32, 512, 538, 701, 704, 832 |
| MhlI | GDGCHC | 1 cut(s) | 239 |
| MluCI | AATT | 6 cut(s) | 24, 114, 131, 481, 534, 556 |
| MluI | ACGCGT | 1 cut(s) | 331 |
| MlyI | GAGTC | 1 cut(s) | 631 |
| MmeI | TCCRAC | 1 cut(s) | 629 |
| MnlI | CCTC | 5 cut(s) | 398, 522, 677, 680, 690 |
| MroXI | GAANNNNTTC | 1 cut(s) | 135 |
| MseI | TTAA | 5 cut(s) | 212, 251, 312, 345, 720 |
| MslI | CAYNNNNRTG | 1 cut(s) | 152 |
| MspCI | CTTAAG | 1 cut(s) | 311 |
| MspI | CCGG | 1 cut(s) | 391 |
| MspR9I | CCNGG | 1 cut(s) | 619 |
| MvaI | CCWGG | 1 cut(s) | 619 |
| MvnI | CGCG | 1 cut(s) | 333 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 234, 339, 661 |
| NdeII | GATC | 5 cut(s) | 157, 183, 325, 538, 589 |
| NlaIII | CATG | 4 cut(s) | 232, 436, 448, 655 |
| PaeR7I | CTCGAG | 1 cut(s) | 708 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 792 |
| PdmI | GAANNNNTTC | 1 cut(s) | 135 |
| PfeI | GAWTC | 1 cut(s) | 11 |
| PleI | GAGTC | 1 cut(s) | 630 |
| PpsI | GAGTC | 1 cut(s) | 630 |
| Psp6I | CCWGG | 1 cut(s) | 617 |
| PspFI | CCCAGC | 1 cut(s) | 109 |
| PspGI | CCWGG | 1 cut(s) | 617 |
| RsaI | GTAC | 1 cut(s) | 355 |
| RsaNI | GTAC | 1 cut(s) | 354 |
| RseI | CAYNNNNRTG | 1 cut(s) | 152 |
| SaqAI | TTAA | 5 cut(s) | 212, 251, 312, 345, 720 |
| Sau3AI | GATC | 5 cut(s) | 157, 183, 325, 538, 589 |
| SchI | GAGTC | 1 cut(s) | 631 |
| ScrFI | CCNGG | 1 cut(s) | 619 |
| SduI | GDGCHC | 1 cut(s) | 239 |
| SfaNI | GCATC | 1 cut(s) | 493 |
| Sfr274I | CTCGAG | 1 cut(s) | 708 |
| SlaI | CTCGAG | 1 cut(s) | 708 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 152 |
| SmlI | CTYRAG | 3 cut(s) | 311, 708, 748 |
| SmoI | CTYRAG | 3 cut(s) | 311, 708, 748 |
| Sse9I | AATT | 6 cut(s) | 24, 114, 131, 481, 534, 556 |
| SspI | AATATT | 1 cut(s) | 812 |
| SspMI | CTAG | 2 cut(s) | 552, 744 |
| StyD4I | CCNGG | 1 cut(s) | 617 |
| TaaI | ACNGT | 2 cut(s) | 34, 647 |
| TaiI | ACGT | 2 cut(s) | 59, 454 |
| TaqI | TCGA | 9 cut(s) | 160, 195, 219, 328, 584, 592, 709, 729, 786 |
| TaqII | GACCGA | 1 cut(s) | 824 |
| TasI | AATT | 6 cut(s) | 24, 114, 131, 481, 534, 556 |
| TatI | WGTACW | 1 cut(s) | 353 |
| TfiI | GAWTC | 1 cut(s) | 11 |
| Tru1I | TTAA | 5 cut(s) | 212, 251, 312, 345, 720 |
| Tru9I | TTAA | 5 cut(s) | 212, 251, 312, 345, 720 |
| TscAI | CASTG | 1 cut(s) | 575 |
| TspDTI | ATGAA | 2 cut(s) | 513, 795 |
| TspRI | CASTG | 1 cut(s) | 575 |
| Vha464I | CTTAAG | 1 cut(s) | 311 |
| XhoI | CTCGAG | 1 cut(s) | 708 |
| XmiI | GTMKAC | 1 cut(s) | 519 |
| XmnI | GAANNNNTTC | 1 cut(s) | 135 |
| XspI | CTAG | 2 cut(s) | 552, 744 |
| ZraI | GACGTC | 1 cut(s) | 452 |