Rh6DG100800

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
12650921 .. 12652999
2079 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG100800.1

Sequence Viewer

Length: 1185 bp
ATGCGATTCAAATGCGCTTGTAAATCGTGGTACAATTTGATAAAATCTCCTAGTTTTGTGGCCAAGAACCTTTCTTATTCCAAGAACAATGAATTTGCATCCTCCACTTCCCTCGTCTTCAAGCGTACTGTCCTCAAGGACAATACCATCAAGGACAAGAATGAAATTACTTCAATCCTATCCGAGGATAACAACAATAGGAAGGAAACTTTGCTTTCATTACTTACTCTTTCCAACCACGATGACCAAAACTTTGGTTGCATTGTTGAGGACTTTCCTCTTCCTTCTCCTATGTGTTTCTATGCCCTTAATATACCGCTTGCAGGTCATTGTGATGGAATTGTTTGTCTTTCTCTTGTTAACGATGAAGATGTTGTTTTGTACAATCCATCAATCAAGGAAGACTTTGAATTCCTTCCCAAGTCATGTCTTCTTTTGCCTCACAAAGATTTCAATGATTTTGATAATGAAGATGATTATTATGATGCATTAAGATCGGATCCGAGAGGTGTGGGATTTGGATTCGATTCAAAAGCTAAAGTATACAAGGTTGTTAGAATTGTTGGTTTTACGTCAGGTTACTACGCGGATACACATCCTTCAAGAGCAGAGGTTTTCACTTTGGGTGCTCGTTCTTGGAGAGAGATCAAGATTGATACAAAAGTTACTGTCTTTTCGCATCCTTCTTTTAACATATGCTTAAAAGGAATTTGTTACTGGTCTGCACTAATAAGGGATAAAGAAGTCCTCCTTTCATTTCATATGAGTGAAGAGCTATTTGATGAGATATCAGTTCCAGAAAGTATCCATCATATGGAAGGATTCCTCAAGACTTTTTCTGTGTGGCAAGAATCCATTGTTCTTGTTGCCTATAAACGAGATGATGATCCTAAGTTCCTAGATATATGGGTGATGGGTGAGCCTGGTGATTTTAGAGGTTCATGGACGAAGCATTTAACTATCGGACCTGTAGAATGTGACATTCCATTAAGCTTTTGGAAGAGTGACGAGATTCTTGTGGGTACTGCTGATGGATGCGTAGTCTCCTATAACATTGATACCCAAACACTCAAGTATCTTCCAATTCATGTTGCAGAAGGTCCATCACGAACACAGTGTCTTGTTTATGTAAATAGTATTATTTCAGTAAAGGAAAACAATAGCTCAATGAGACAATTGCCATGA

Protein Analysis

394

Amino Acids

44.83

Weight (kDa)

5.28

Isoelectric Point (pI)

38.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 77 - 320 7.7e-18 F-box associated beta propeller domain
FBA_1 PF07734 104 - 356 2.1e-20 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 314
AccB7I CCANNNNNTGG 1 cut(s) 814
AccI GTMKAC 1 cut(s) 543
AccII CGCG 1 cut(s) 587
AciI CCGC 2 cut(s) 317, 587
AclWI GGATC 3 cut(s) 494, 507, 881
AcoI YGGCCR 1 cut(s) 60
AcsI RAATTY 3 cut(s) 92, 410, 708
AfaI GTAC 4 cut(s) 32, 127, 383, 1024
AfiI CCNNNNNNNGG 3 cut(s) 184, 323, 814
AgsI TTSAA 7 cut(s) 10, 121, 174, 410, 454, 531, 603
AjnI CCWGG 1 cut(s) 922
AluBI AGCT 4 cut(s) 536, 775, 993, 1164
AluI AGCT 4 cut(s) 536, 775, 993, 1164
Alw21I GWGCWC 1 cut(s) 631
Alw26I GTCTC 2 cut(s) 1048, 1165
AlwI GGATC 3 cut(s) 494, 507, 881
AoxI GGCC 1 cut(s) 60
ApoI RAATTY 3 cut(s) 92, 410, 708
ArsI GACNNNNNNTTYG 4 cut(s) 236, 268, 1102, 1134
Asp700I GAANNNNTTC 1 cut(s) 414
AspLEI GCGC 1 cut(s) 17
AspS9I GGNCC 2 cut(s) 965, 1100
AsuHPI GGTGA 3 cut(s) 922, 929, 938
AvaII GGWCC 2 cut(s) 965, 1100
BaeI ACNNNNGTAYC 4 cut(s) 648, 681, 1058, 1091
BalI TGGCCA 1 cut(s) 62
BamHI GGATCC 1 cut(s) 499
BbsI GAAGAC 3 cut(s) 109, 408, 422
Bbv12I GWGCWC 1 cut(s) 631
BccI CCATC 7 cut(s) 155, 329, 397, 816, 907, 1025, 1111
BcgI CGANNNNNNTGC 3 cut(s) 28, 477, 511
BciT130I CCWGG 1 cut(s) 924
BciVI GTATCC 2 cut(s) 583, 815
BcoDI GTCTC 2 cut(s) 1048, 1165
BfaI CTAG 2 cut(s) 51, 899
BfmI CTRYAG 1 cut(s) 969
BfuAI ACCTGC 1 cut(s) 314
BfuI GTATCC 2 cut(s) 583, 815
Bme1390I CCNGG 1 cut(s) 924
Bme18I GGWCC 2 cut(s) 965, 1100
BmgT120I GGNCC 2 cut(s) 965, 1100
BmiI GGNNCC 1 cut(s) 501
BmrFI CCNGG 1 cut(s) 924
BmsI GCATC 4 cut(s) 107, 475, 688, 1025
BpiI GAAGAC 3 cut(s) 109, 408, 422
BpuEI CTTGAG 3 cut(s) 119, 812, 1055
BsaBI GATNNNNATC 2 cut(s) 594, 885
BsaJI CCNNGG 1 cut(s) 183
Bsc4I CCNNNNNNNGG 3 cut(s) 184, 323, 814
Bse1I ACTGG 1 cut(s) 722
Bse8I GATNNNNATC 2 cut(s) 594, 885
BseBI CCWGG 1 cut(s) 924
BseDI CCNNGG 1 cut(s) 183
BseGI GGATG 4 cut(s) 98, 595, 679, 1040
BseJI GATNNNNATC 2 cut(s) 594, 885
BseLI CCNNNNNNNGG 3 cut(s) 184, 323, 814
BseNI ACTGG 1 cut(s) 722
BsgI GTGCAG 1 cut(s) 708
Bsh1236I CGCG 1 cut(s) 587
BshFI GGCC 1 cut(s) 62
BsiHKAI GWGCWC 1 cut(s) 631
BslI CCNNNNNNNGG 3 cut(s) 184, 323, 814
BsmAI GTCTC 2 cut(s) 1048, 1165
BsnI GGCC 1 cut(s) 62
Bsp1286I GDGCHC 1 cut(s) 631
Bsp1407I TGTACA 1 cut(s) 381
Bsp143I GATC 4 cut(s) 494, 499, 645, 886
BspACI CCGC 2 cut(s) 317, 587
BspANI GGCC 1 cut(s) 62
BspFNI CGCG 1 cut(s) 587
BspLI GGNNCC 1 cut(s) 501
BspMI ACCTGC 1 cut(s) 314
BspPI GGATC 3 cut(s) 494, 507, 881
BspQI GCTCTTC 1 cut(s) 765
BsrGI TGTACA 1 cut(s) 381
BsrI ACTGG 1 cut(s) 722
BssECI CCNNGG 1 cut(s) 183
BssMI GATC 4 cut(s) 494, 499, 645, 886
BssNAI GTATAC 1 cut(s) 544
Bst1107I GTATAC 1 cut(s) 544
Bst2UI CCWGG 1 cut(s) 924
Bst4CI ACNGT 3 cut(s) 130, 670, 1116
Bst6I CTCTTC 3 cut(s) 285, 765, 995
BstAUI TGTACA 1 cut(s) 381
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 1 cut(s) 891
BstENI CCTNNNNNAGG 1 cut(s) 182
BstF5I GGATG 4 cut(s) 98, 595, 679, 1040
BstFNI CGCG 1 cut(s) 587
BstHHI GCGC 1 cut(s) 17
BstKTI GATC 4 cut(s) 497, 502, 648, 889
BstMAI GTCTC 2 cut(s) 1048, 1165
BstMBI GATC 4 cut(s) 494, 499, 645, 886
BstNI CCWGG 1 cut(s) 924
BstSCI CCNGG 1 cut(s) 922
BstSFI CTRYAG 1 cut(s) 969
BstUI CGCG 1 cut(s) 587
BstV2I GAAGAC 3 cut(s) 109, 408, 422
BstX2I RGATCY 1 cut(s) 499
BstXI CCANNNNNNTGG 1 cut(s) 254
BstYI RGATCY 1 cut(s) 499
BstZ17I GTATAC 1 cut(s) 544
BsuI GTATCC 2 cut(s) 583, 815
BsuRI GGCC 1 cut(s) 62
BtsCI GGATG 4 cut(s) 98, 595, 679, 1040
BtsIMutI CAGTG 1 cut(s) 1121
BveI ACCTGC 1 cut(s) 314
Cac8I GCNNGC 1 cut(s) 321
CfoI GCGC 1 cut(s) 17
Cfr13I GGNCC 2 cut(s) 965, 1100
Csp6I GTAC 4 cut(s) 31, 126, 382, 1023
CviAII CATG 4 cut(s) 426, 942, 1088, 1182
CviJI RGCY 6 cut(s) 62, 536, 775, 922, 993, 1164
CviKI_1 RGCY 6 cut(s) 62, 536, 775, 922, 993, 1164
CviQI GTAC 4 cut(s) 31, 126, 382, 1023
DdeI CTNAG 1 cut(s) 891
DpnI GATC 4 cut(s) 496, 501, 647, 888
DpnII GATC 4 cut(s) 494, 499, 645, 886
EaeI YGGCCR 1 cut(s) 60
Eam1104I CTCTTC 3 cut(s) 285, 765, 995
EarI CTCTTC 3 cut(s) 285, 765, 995
Eco32I GATATC 1 cut(s) 789
Eco47I GGWCC 2 cut(s) 965, 1100
EcoNI CCTNNNNNAGG 1 cut(s) 182
EcoRI GAATTC 1 cut(s) 410
EcoRII CCWGG 1 cut(s) 922
EcoRV GATATC 1 cut(s) 789
EcoT22I ATGCAT 1 cut(s) 490
FaeI CATG 4 cut(s) 429, 945, 1091, 1185
FalI AAGNNNNNCTT 4 cut(s) 389, 421, 735, 767
FatI CATG 4 cut(s) 425, 941, 1087, 1181
FauNDI CATATG 3 cut(s) 695, 762, 813
FblI GTMKAC 1 cut(s) 543
FokI GGATG 4 cut(s) 85, 582, 666, 1047
FspBI CTAG 2 cut(s) 51, 899
GlaI GCGC 1 cut(s) 16
HaeIII GGCC 1 cut(s) 62
HhaI GCGC 1 cut(s) 17
Hin1II CATG 4 cut(s) 429, 945, 1091, 1185
Hin6I GCGC 1 cut(s) 15
HinP1I GCGC 1 cut(s) 15
HincII GTYRAC 1 cut(s) 361
HindII GTYRAC 1 cut(s) 361
HindIII AAGCTT 1 cut(s) 991
HinfI GANTC 6 cut(s) 6, 522, 527, 822, 851, 1012
HpaI GTTAAC 1 cut(s) 361
HphI GGTGA 3 cut(s) 922, 929, 938
Hpy166II GTNNAC 2 cut(s) 361, 544
Hpy188I TCNGA 4 cut(s) 184, 499, 504, 965
Hpy188III TCNNGA 5 cut(s) 603, 649, 797, 829, 1107
Hpy8I GTNNAC 2 cut(s) 361, 544
HpyAV CCTTC 7 cut(s) 196, 294, 425, 609, 693, 812, 1091
HpyCH4III ACNGT 3 cut(s) 130, 670, 1116
HpyCH4IV ACGT 1 cut(s) 572
HpyCH4V TGCA 6 cut(s) 98, 261, 323, 488, 725, 1094
HpyF3I CTNAG 1 cut(s) 891
HpySE526I ACGT 1 cut(s) 572
Hsp92II CATG 4 cut(s) 429, 945, 1091, 1185
HspAI GCGC 1 cut(s) 15
KspAI GTTAAC 1 cut(s) 361
Kzo9I GATC 4 cut(s) 494, 499, 645, 886
LguI GCTCTTC 1 cut(s) 765
LpnPI CCDG 7 cut(s) 309, 561, 703, 810, 909, 936, 981
LweI GCATC 4 cut(s) 107, 475, 688, 1025
MaeI CTAG 2 cut(s) 51, 899
MaeII ACGT 1 cut(s) 572
MaeIII GTNAC 5 cut(s) 578, 664, 713, 977, 1004
MalI GATC 4 cut(s) 496, 501, 647, 888
MboI GATC 4 cut(s) 494, 499, 645, 886
MboII GAAGA 9 cut(s) 109, 272, 380, 413, 422, 482, 782, 1012, 1070
MfeI CAATTG 1 cut(s) 1175
MflI RGATCY 1 cut(s) 499
MhlI GDGCHC 1 cut(s) 631
MlsI TGGCCA 1 cut(s) 62
MluCI AATT 9 cut(s) 34, 92, 165, 339, 410, 558, 708, 1083, 1175
MluNI TGGCCA 1 cut(s) 62
MmeI TCCRAC 1 cut(s) 258
Mox20I TGGCCA 1 cut(s) 62
Mph1103I ATGCAT 1 cut(s) 490
MroXI GAANNNNTTC 1 cut(s) 414
MscI TGGCCA 1 cut(s) 62
MseI TTAA 7 cut(s) 309, 360, 491, 690, 701, 956, 989
MslI CAYNNNNRTG 2 cut(s) 333, 765
Msp20I TGGCCA 1 cut(s) 62
MspR9I CCNGG 1 cut(s) 924
MunI CAATTG 1 cut(s) 1175
MvaI CCWGG 1 cut(s) 924
MvnI CGCG 1 cut(s) 587
NdeI CATATG 3 cut(s) 695, 762, 813
NdeII GATC 4 cut(s) 494, 499, 645, 886
NlaIII CATG 4 cut(s) 429, 945, 1091, 1185
NlaIV GGNNCC 1 cut(s) 501
NmuCI GTSAC 2 cut(s) 977, 1004
NsiI ATGCAT 1 cut(s) 490
PciSI GCTCTTC 1 cut(s) 765
PdmI GAANNNNTTC 1 cut(s) 414
PfeI GAWTC 6 cut(s) 6, 522, 527, 822, 851, 1012
PflMI CCANNNNNTGG 1 cut(s) 814
Psp6I CCWGG 1 cut(s) 922
PspGI CCWGG 1 cut(s) 922
PspN4I GGNNCC 1 cut(s) 501
PspPI GGNCC 2 cut(s) 965, 1100
PsuI RGATCY 1 cut(s) 499
RsaI GTAC 4 cut(s) 32, 127, 383, 1024
RsaNI GTAC 4 cut(s) 31, 126, 382, 1023
RseI CAYNNNNRTG 2 cut(s) 333, 765
SapI GCTCTTC 1 cut(s) 765
SaqAI TTAA 7 cut(s) 309, 360, 491, 690, 701, 956, 989
Sau3AI GATC 4 cut(s) 494, 499, 645, 886
Sau96I GGNCC 2 cut(s) 965, 1100
ScrFI CCNGG 1 cut(s) 924
SduI GDGCHC 1 cut(s) 631
SfaNI GCATC 4 cut(s) 107, 475, 688, 1025
SfcI CTRYAG 1 cut(s) 969
SinI GGWCC 2 cut(s) 965, 1100
SmiMI CAYNNNNRTG 2 cut(s) 333, 765
SmlI CTYRAG 3 cut(s) 134, 827, 1070
SmoI CTYRAG 3 cut(s) 134, 827, 1070
Sse9I AATT 9 cut(s) 34, 92, 165, 339, 410, 558, 708, 1083, 1175
SsiI CCGC 2 cut(s) 317, 587
SspMI CTAG 2 cut(s) 51, 899
StyD4I CCNGG 1 cut(s) 922
TaaI ACNGT 3 cut(s) 130, 670, 1116
TaiI ACGT 1 cut(s) 575
TaqI TCGA 1 cut(s) 525
TasI AATT 9 cut(s) 34, 92, 165, 339, 410, 558, 708, 1083, 1175
TatI WGTACW 1 cut(s) 381
TfiI GAWTC 6 cut(s) 6, 522, 527, 822, 851, 1012
Tru1I TTAA 7 cut(s) 309, 360, 491, 690, 701, 956, 989
Tru9I TTAA 7 cut(s) 309, 360, 491, 690, 701, 956, 989
TscAI CASTG 1 cut(s) 1121
TseFI GTSAC 2 cut(s) 977, 1004
Tsp45I GTSAC 2 cut(s) 977, 1004
TspDTI ATGAA 9 cut(s) 105, 177, 207, 381, 483, 744, 749, 930, 1076
TspRI CASTG 1 cut(s) 1121
Van91I CCANNNNNTGG 1 cut(s) 814
VpaK11BI GGWCC 2 cut(s) 965, 1100
XagI CCTNNNNNAGG 1 cut(s) 182
XapI RAATTY 3 cut(s) 92, 410, 708
XcmI CCANNNNNNNNNTGG 1 cut(s) 993
XmiI GTMKAC 1 cut(s) 543
XmnI GAANNNNTTC 1 cut(s) 414
XspI CTAG 2 cut(s) 51, 899
Zsp2I ATGCAT 1 cut(s) 490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.