Cyclic phosphodiesterase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| AUX_IAA | PF02309 | 25 - 244 | 7.4e-89 | AUX/IAA family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 446 |
| AccBSI | CCGCTC | 1 cut(s) | 135 |
| AccI | GTMKAC | 1 cut(s) | 453 |
| AciI | CCGC | 3 cut(s) | 104, 135, 691 |
| AclWI | GGATC | 5 cut(s) | 51, 312, 375, 699, 712 |
| AcoI | YGGCCR | 2 cut(s) | 212, 305 |
| AcvI | CACGTG | 1 cut(s) | 281 |
| AfaI | GTAC | 5 cut(s) | 10, 53, 397, 467, 654 |
| AgsI | TTSAA | 4 cut(s) | 175, 347, 460, 748 |
| AhlI | ACTAGT | 3 cut(s) | 5, 392, 398 |
| AluBI | AGCT | 8 cut(s) | 57, 82, 178, 218, 232, 474, 484, 513 |
| AluI | AGCT | 8 cut(s) | 57, 82, 178, 218, 232, 474, 484, 513 |
| Alw26I | GTCTC | 1 cut(s) | 68 |
| AlwI | GGATC | 5 cut(s) | 51, 312, 375, 699, 712 |
| AoxI | GGCC | 3 cut(s) | 212, 305, 432 |
| ApaI | GGGCCC | 1 cut(s) | 436 |
| ApeKI | GCWGC | 5 cut(s) | 14, 82, 266, 387, 404 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 554 |
| AspLEI | GCGC | 2 cut(s) | 447, 727 |
| AspS9I | GGNCC | 3 cut(s) | 101, 432, 433 |
| AsuC2I | CCSGG | 1 cut(s) | 99 |
| AsuII | TTCGAA | 1 cut(s) | 69 |
| AvaII | GGWCC | 1 cut(s) | 101 |
| BaeGI | GKGCMC | 1 cut(s) | 436 |
| BalI | TGGCCA | 1 cut(s) | 307 |
| BamHI | GGATCC | 1 cut(s) | 704 |
| BanII | GRGCYC | 1 cut(s) | 436 |
| BbrPI | CACGTG | 1 cut(s) | 281 |
| BbsI | GAAGAC | 1 cut(s) | 624 |
| BbvI | GCAGC | 4 cut(s) | 69, 253, 399, 416 |
| BccI | CCATC | 2 cut(s) | 218, 422 |
| BceAI | ACGGC | 2 cut(s) | 130, 719 |
| BcnI | CCSGG | 1 cut(s) | 99 |
| BcoDI | GTCTC | 1 cut(s) | 68 |
| BcuI | ACTAGT | 3 cut(s) | 5, 392, 398 |
| BfaI | CTAG | 4 cut(s) | 6, 89, 393, 399 |
| BisI | GCNGC | 5 cut(s) | 15, 83, 267, 388, 405 |
| BlsI | GCNGC | 5 cut(s) | 16, 84, 268, 389, 406 |
| BmcAI | AGTACT | 2 cut(s) | 10, 397 |
| Bme1390I | CCNGG | 1 cut(s) | 99 |
| Bme18I | GGWCC | 1 cut(s) | 101 |
| BmgT120I | GGNCC | 3 cut(s) | 101, 432, 433 |
| BmiI | GGNNCC | 5 cut(s) | 102, 433, 434, 435, 706 |
| BmrFI | CCNGG | 1 cut(s) | 99 |
| BmsI | GCATC | 3 cut(s) | 217, 247, 627 |
| BpiI | GAAGAC | 1 cut(s) | 624 |
| BpmI | CTGGAG | 2 cut(s) | 240, 254 |
| Bpu14I | TTCGAA | 1 cut(s) | 69 |
| BpuEI | CTTGAG | 1 cut(s) | 276 |
| BpuMI | CCSGG | 1 cut(s) | 99 |
| BsaAI | YACGTR | 1 cut(s) | 281 |
| BsaBI | GATNNNNATC | 2 cut(s) | 207, 366 |
| BsaJI | CCNNGG | 4 cut(s) | 121, 656, 708, 735 |
| Bse118I | RCCGGY | 1 cut(s) | 383 |
| Bse8I | GATNNNNATC | 2 cut(s) | 207, 366 |
| BseDI | CCNNGG | 4 cut(s) | 121, 656, 708, 735 |
| BseGI | GGATG | 3 cut(s) | 262, 433, 642 |
| BseJI | GATNNNNATC | 2 cut(s) | 207, 366 |
| BseMII | CTCAG | 1 cut(s) | 588 |
| BseRI | GAGGAG | 1 cut(s) | 53 |
| BseSI | GKGCMC | 1 cut(s) | 436 |
| BseXI | GCAGC | 4 cut(s) | 69, 253, 399, 416 |
| BsgI | GTGCAG | 1 cut(s) | 423 |
| BshFI | GGCC | 3 cut(s) | 214, 307, 434 |
| BsiSI | CCGG | 2 cut(s) | 98, 384 |
| BsmAI | GTCTC | 1 cut(s) | 68 |
| BsmBI | CGTCTC | 1 cut(s) | 68 |
| BsnI | GGCC | 3 cut(s) | 214, 307, 434 |
| Bsp119I | TTCGAA | 1 cut(s) | 69 |
| Bsp120I | GGGCCC | 1 cut(s) | 432 |
| Bsp1286I | GDGCHC | 1 cut(s) | 436 |
| Bsp143I | GATC | 6 cut(s) | 43, 237, 317, 361, 367, 704 |
| Bsp19I | CCATGG | 1 cut(s) | 656 |
| BspACI | CCGC | 3 cut(s) | 104, 135, 691 |
| BspANI | GGCC | 3 cut(s) | 214, 307, 434 |
| BspCNI | CTCAG | 1 cut(s) | 589 |
| BspHI | TCATGA | 1 cut(s) | 558 |
| BspLI | GGNNCC | 5 cut(s) | 102, 433, 434, 435, 706 |
| BspPI | GGATC | 5 cut(s) | 51, 312, 375, 699, 712 |
| BspQI | GCTCTTC | 1 cut(s) | 125 |
| BspT104I | TTCGAA | 1 cut(s) | 69 |
| BsrBI | CCGCTC | 1 cut(s) | 135 |
| BsrFI | RCCGGY | 1 cut(s) | 383 |
| BssAI | RCCGGY | 1 cut(s) | 383 |
| BssECI | CCNNGG | 4 cut(s) | 121, 656, 708, 735 |
| BssMI | GATC | 6 cut(s) | 43, 237, 317, 361, 367, 704 |
| BssT1I | CCWWGG | 2 cut(s) | 121, 656 |
| Bst4CI | ACNGT | 3 cut(s) | 166, 343, 533 |
| Bst6I | CTCTTC | 3 cut(s) | 66, 125, 140 |
| BstBAI | YACGTR | 1 cut(s) | 281 |
| BstBI | TTCGAA | 1 cut(s) | 69 |
| BstC8I | GCNNGC | 2 cut(s) | 216, 689 |
| BstDEI | CTNAG | 1 cut(s) | 597 |
| BstDSI | CCRYGG | 2 cut(s) | 656, 735 |
| BstF5I | GGATG | 3 cut(s) | 262, 433, 642 |
| BstHHI | GCGC | 2 cut(s) | 447, 727 |
| BstKTI | GATC | 6 cut(s) | 46, 240, 320, 364, 370, 707 |
| BstMAI | GTCTC | 1 cut(s) | 68 |
| BstMBI | GATC | 6 cut(s) | 43, 237, 317, 361, 367, 704 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 103, 123, 132, 266, 272, 281, 731 |
| BstSCI | CCNGG | 1 cut(s) | 97 |
| BstSLI | GKGCMC | 1 cut(s) | 436 |
| BstV1I | GCAGC | 4 cut(s) | 69, 253, 399, 416 |
| BstV2I | GAAGAC | 1 cut(s) | 624 |
| BstX2I | RGATCY | 1 cut(s) | 704 |
| BstYI | RGATCY | 1 cut(s) | 704 |
| BsuRI | GGCC | 3 cut(s) | 214, 307, 434 |
| BtgI | CCRYGG | 2 cut(s) | 656, 735 |
| BtsCI | GGATG | 3 cut(s) | 262, 433, 642 |
| Cac8I | GCNNGC | 2 cut(s) | 216, 689 |
| CciI | TCATGA | 1 cut(s) | 558 |
| CfoI | GCGC | 2 cut(s) | 447, 727 |
| Cfr10I | RCCGGY | 1 cut(s) | 383 |
| Cfr13I | GGNCC | 3 cut(s) | 101, 432, 433 |
| CseI | GACGC | 1 cut(s) | 74 |
| Csp6I | GTAC | 5 cut(s) | 9, 52, 396, 466, 653 |
| CviAII | CATG | 4 cut(s) | 424, 559, 657, 678 |
| CviQI | GTAC | 5 cut(s) | 9, 52, 396, 466, 653 |
| DdeI | CTNAG | 1 cut(s) | 597 |
| DpnI | GATC | 6 cut(s) | 45, 239, 319, 363, 369, 706 |
| DpnII | GATC | 6 cut(s) | 43, 237, 317, 361, 367, 704 |
| EaeI | YGGCCR | 2 cut(s) | 212, 305 |
| Eam1104I | CTCTTC | 3 cut(s) | 66, 125, 140 |
| EarI | CTCTTC | 3 cut(s) | 66, 125, 140 |
| Eco130I | CCWWGG | 2 cut(s) | 121, 656 |
| Eco24I | GRGCYC | 1 cut(s) | 436 |
| Eco47I | GGWCC | 1 cut(s) | 101 |
| Eco72I | CACGTG | 1 cut(s) | 281 |
| EcoO109I | RGGNCCY | 2 cut(s) | 432, 433 |
| EcoT14I | CCWWGG | 2 cut(s) | 121, 656 |
| EcoT38I | GRGCYC | 1 cut(s) | 436 |
| ErhI | CCWWGG | 2 cut(s) | 121, 656 |
| Esp3I | CGTCTC | 1 cut(s) | 68 |
| FaeI | CATG | 4 cut(s) | 427, 562, 660, 681 |
| FaiI | YATR | 8 cut(s) | 20, 425, 439, 560, 603, 615, 658, 679 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 41, 73, 167, 199 |
| FatI | CATG | 4 cut(s) | 423, 558, 656, 677 |
| FblI | GTMKAC | 1 cut(s) | 453 |
| Fnu4HI | GCNGC | 5 cut(s) | 15, 83, 267, 388, 405 |
| FokI | GGATG | 3 cut(s) | 269, 440, 649 |
| FriOI | GRGCYC | 1 cut(s) | 436 |
| Fsp4HI | GCNGC | 5 cut(s) | 15, 83, 267, 388, 405 |
| FspBI | CTAG | 4 cut(s) | 6, 89, 393, 399 |
| FspI | TGCGCA | 1 cut(s) | 446 |
| GlaI | GCGC | 2 cut(s) | 446, 726 |
| GluI | GCNGC | 5 cut(s) | 15, 83, 267, 388, 405 |
| GsuI | CTGGAG | 2 cut(s) | 240, 254 |
| HaeIII | GGCC | 3 cut(s) | 214, 307, 434 |
| HapII | CCGG | 2 cut(s) | 98, 384 |
| HgaI | GACGC | 1 cut(s) | 74 |
| HhaI | GCGC | 2 cut(s) | 447, 727 |
| Hin1II | CATG | 4 cut(s) | 427, 562, 660, 681 |
| Hin6I | GCGC | 2 cut(s) | 445, 725 |
| HinP1I | GCGC | 2 cut(s) | 445, 725 |
| HincII | GTYRAC | 1 cut(s) | 454 |
| HindII | GTYRAC | 1 cut(s) | 454 |
| HinfI | GANTC | 1 cut(s) | 674 |
| HpaII | CCGG | 2 cut(s) | 98, 384 |
| Hpy166II | GTNNAC | 1 cut(s) | 454 |
| Hpy188I | TCNGA | 6 cut(s) | 48, 317, 326, 588, 598, 709 |
| Hpy188III | TCNNGA | 4 cut(s) | 337, 365, 559, 748 |
| Hpy8I | GTNNAC | 1 cut(s) | 454 |
| Hpy99I | CGWCG | 2 cut(s) | 193, 674 |
| HpyAV | CCTTC | 6 cut(s) | 244, 331, 526, 544, 593, 694 |
| HpyCH4III | ACNGT | 3 cut(s) | 166, 343, 533 |
| HpyCH4IV | ACGT | 1 cut(s) | 280 |
| HpyCH4V | TGCA | 3 cut(s) | 284, 404, 681 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 103, 123, 132, 266, 272, 281, 731 |
| HpyF3I | CTNAG | 1 cut(s) | 597 |
| HpySE526I | ACGT | 1 cut(s) | 280 |
| Hsp92II | CATG | 4 cut(s) | 427, 562, 660, 681 |
| HspAI | GCGC | 2 cut(s) | 445, 725 |
| Kzo9I | GATC | 6 cut(s) | 43, 237, 317, 361, 367, 704 |
| LguI | GCTCTTC | 1 cut(s) | 125 |
| LmnI | GCTCC | 4 cut(s) | 79, 274, 280, 518 |
| LpnPI | CCDG | 8 cut(s) | 111, 204, 218, 228, 285, 350, 356, 397 |
| Lsp1109I | GCAGC | 4 cut(s) | 69, 253, 399, 416 |
| LweI | GCATC | 3 cut(s) | 217, 247, 627 |
| MaeI | CTAG | 4 cut(s) | 6, 89, 393, 399 |
| MaeII | ACGT | 1 cut(s) | 280 |
| MaeIII | GTNAC | 3 cut(s) | 337, 527, 537 |
| MalI | GATC | 6 cut(s) | 45, 239, 319, 363, 369, 706 |
| MbiI | CCGCTC | 1 cut(s) | 135 |
| MboI | GATC | 6 cut(s) | 43, 237, 317, 361, 367, 704 |
| MboII | GAAGA | 5 cut(s) | 83, 142, 157, 629, 641 |
| MfeI | CAATTG | 1 cut(s) | 714 |
| MflI | RGATCY | 1 cut(s) | 704 |
| MhlI | GDGCHC | 1 cut(s) | 436 |
| MlsI | TGGCCA | 1 cut(s) | 307 |
| MluCI | AATT | 1 cut(s) | 714 |
| MluNI | TGGCCA | 1 cut(s) | 307 |
| MnlI | CCTC | 5 cut(s) | 31, 34, 143, 247, 703 |
| Mox20I | TGGCCA | 1 cut(s) | 307 |
| MroXI | GAANNNNTTC | 1 cut(s) | 554 |
| MscI | TGGCCA | 1 cut(s) | 307 |
| MseI | TTAA | 1 cut(s) | 414 |
| Msp20I | TGGCCA | 1 cut(s) | 307 |
| MspA1I | CMGCKG | 3 cut(s) | 106, 218, 232 |
| MspI | CCGG | 2 cut(s) | 98, 384 |
| MspR9I | CCNGG | 1 cut(s) | 99 |
| MunI | CAATTG | 1 cut(s) | 714 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 103, 123, 132, 266, 272, 281, 731 |
| NciI | CCSGG | 1 cut(s) | 99 |
| NcoI | CCATGG | 1 cut(s) | 656 |
| NdeII | GATC | 6 cut(s) | 43, 237, 317, 361, 367, 704 |
| NlaIII | CATG | 4 cut(s) | 427, 562, 660, 681 |
| NlaIV | GGNNCC | 5 cut(s) | 102, 433, 434, 435, 706 |
| NmeAIII | GCCGAG | 1 cut(s) | 753 |
| NmuCI | GTSAC | 2 cut(s) | 337, 537 |
| NsbI | TGCGCA | 1 cut(s) | 446 |
| NspV | TTCGAA | 1 cut(s) | 69 |
| PagI | TCATGA | 1 cut(s) | 558 |
| PciSI | GCTCTTC | 1 cut(s) | 125 |
| PdmI | GAANNNNTTC | 1 cut(s) | 554 |
| PfeI | GAWTC | 1 cut(s) | 674 |
| PkrI | GCNGC | 5 cut(s) | 16, 84, 268, 389, 406 |
| PmaCI | CACGTG | 1 cut(s) | 281 |
| PmlI | CACGTG | 1 cut(s) | 281 |
| Ppu21I | YACGTR | 1 cut(s) | 281 |
| PspCI | CACGTG | 1 cut(s) | 281 |
| PspN4I | GGNNCC | 5 cut(s) | 102, 433, 434, 435, 706 |
| PspOMI | GGGCCC | 1 cut(s) | 432 |
| PspPI | GGNCC | 3 cut(s) | 101, 432, 433 |
| PsuI | RGATCY | 1 cut(s) | 704 |
| PvuII | CAGCTG | 2 cut(s) | 218, 232 |
| RsaI | GTAC | 5 cut(s) | 10, 53, 397, 467, 654 |
| RsaNI | GTAC | 5 cut(s) | 9, 52, 396, 466, 653 |
| SalI | GTCGAC | 1 cut(s) | 452 |
| SapI | GCTCTTC | 1 cut(s) | 125 |
| SaqAI | TTAA | 1 cut(s) | 414 |
| SatI | GCNGC | 5 cut(s) | 15, 83, 267, 388, 405 |
| Sau3AI | GATC | 6 cut(s) | 43, 237, 317, 361, 367, 704 |
| Sau96I | GGNCC | 3 cut(s) | 101, 432, 433 |
| ScaI | AGTACT | 2 cut(s) | 10, 397 |
| ScrFI | CCNGG | 1 cut(s) | 99 |
| SduI | GDGCHC | 1 cut(s) | 436 |
| SfaNI | GCATC | 3 cut(s) | 217, 247, 627 |
| SfuI | TTCGAA | 1 cut(s) | 69 |
| SinI | GGWCC | 1 cut(s) | 101 |
| SmlI | CTYRAG | 1 cut(s) | 291 |
| SmoI | CTYRAG | 1 cut(s) | 291 |
| SpeI | ACTAGT | 3 cut(s) | 5, 392, 398 |
| Sse9I | AATT | 1 cut(s) | 714 |
| SsiI | CCGC | 3 cut(s) | 104, 135, 691 |
| SspMI | CTAG | 4 cut(s) | 6, 89, 393, 399 |
| StyD4I | CCNGG | 1 cut(s) | 97 |
| StyI | CCWWGG | 2 cut(s) | 121, 656 |
| TaaI | ACNGT | 3 cut(s) | 166, 343, 533 |
| TaiI | ACGT | 1 cut(s) | 283 |
| TaqI | TCGA | 3 cut(s) | 69, 453, 672 |
| TasI | AATT | 1 cut(s) | 714 |
| TatI | WGTACW | 3 cut(s) | 8, 51, 395 |
| TfiI | GAWTC | 1 cut(s) | 674 |
| Tru1I | TTAA | 1 cut(s) | 414 |
| Tru9I | TTAA | 1 cut(s) | 414 |
| TseFI | GTSAC | 2 cut(s) | 337, 537 |
| TseI | GCWGC | 5 cut(s) | 14, 82, 266, 387, 404 |
| Tsp45I | GTSAC | 2 cut(s) | 337, 537 |
| TspDTI | ATGAA | 7 cut(s) | 547, 563, 575, 630, 642, 666, 713 |
| TspGWI | ACGGA | 1 cut(s) | 92 |
| VpaK11BI | GGWCC | 1 cut(s) | 101 |
| XmiI | GTMKAC | 1 cut(s) | 453 |
| XmnI | GAANNNNTTC | 1 cut(s) | 554 |
| XspI | CTAG | 4 cut(s) | 6, 89, 393, 399 |
| ZrmI | AGTACT | 2 cut(s) | 10, 397 |