Class S F-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 113 |
| AccII | CGCG | 1 cut(s) | 1301 |
| AciI | CCGC | 3 cut(s) | 1242, 1299, 1396 |
| AclI | AACGTT | 2 cut(s) | 721, 1380 |
| AclWI | GGATC | 2 cut(s) | 67, 1130 |
| AcoI | YGGCCR | 1 cut(s) | 1311 |
| AcsI | RAATTY | 6 cut(s) | 164, 237, 385, 491, 747, 1258 |
| AfaI | GTAC | 4 cut(s) | 104, 552, 656, 699 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1124 |
| AflII | CTTAAG | 1 cut(s) | 206 |
| AflIII | ACRYGT | 1 cut(s) | 1209 |
| AgsI | TTSAA | 5 cut(s) | 82, 483, 496, 970, 1178 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 739, 771 |
| AluBI | AGCT | 5 cut(s) | 334, 784, 823, 923, 1237 |
| AluI | AGCT | 5 cut(s) | 334, 784, 823, 923, 1237 |
| AlwI | GGATC | 2 cut(s) | 67, 1130 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1268 |
| AoxI | GGCC | 2 cut(s) | 132, 1311 |
| ApeKI | GCWGC | 3 cut(s) | 714, 851, 1237 |
| ApoI | RAATTY | 6 cut(s) | 164, 237, 385, 491, 747, 1258 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 894 |
| AspLEI | GCGC | 1 cut(s) | 7 |
| AspS9I | GGNCC | 1 cut(s) | 133 |
| AsuHPI | GGTGA | 3 cut(s) | 332, 898, 1069 |
| AsuII | TTCGAA | 1 cut(s) | 1350 |
| AxyI | CCTNAGG | 1 cut(s) | 661 |
| BalI | TGGCCA | 1 cut(s) | 1313 |
| BauI | CACGAG | 1 cut(s) | 563 |
| BbsI | GAAGAC | 3 cut(s) | 3, 960, 1106 |
| BbvI | GCAGC | 3 cut(s) | 701, 838, 1224 |
| BccI | CCATC | 4 cut(s) | 25, 67, 311, 413 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 66, 100 |
| BfmI | CTRYAG | 2 cut(s) | 785, 1005 |
| BfrI | CTTAAG | 1 cut(s) | 206 |
| BisI | GCNGC | 3 cut(s) | 715, 852, 1238 |
| BlsI | GCNGC | 3 cut(s) | 716, 853, 1239 |
| BmgT120I | GGNCC | 1 cut(s) | 133 |
| BmrI | ACTGGG | 1 cut(s) | 710 |
| BmsI | GCATC | 4 cut(s) | 192, 1327, 1363, 1407 |
| BmuI | ACTGGG | 1 cut(s) | 710 |
| BpiI | GAAGAC | 3 cut(s) | 3, 960, 1106 |
| Bpu14I | TTCGAA | 1 cut(s) | 1350 |
| BpuEI | CTTGAG | 1 cut(s) | 1091 |
| BsaBI | GATNNNNATC | 1 cut(s) | 58 |
| BsaJI | CCNNGG | 1 cut(s) | 1308 |
| BsaWI | WCCGGW | 1 cut(s) | 844 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1124 |
| Bse1I | ACTGG | 2 cut(s) | 705, 872 |
| Bse21I | CCTNAGG | 1 cut(s) | 661 |
| Bse8I | GATNNNNATC | 1 cut(s) | 58 |
| BseDI | CCNNGG | 1 cut(s) | 1308 |
| BseGI | GGATG | 3 cut(s) | 634, 1378, 1398 |
| BseJI | GATNNNNATC | 1 cut(s) | 58 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1124 |
| BseMII | CTCAG | 2 cut(s) | 1209, 1239 |
| BseNI | ACTGG | 2 cut(s) | 705, 872 |
| BseXI | GCAGC | 3 cut(s) | 701, 838, 1224 |
| BsgI | GTGCAG | 1 cut(s) | 687 |
| Bsh1236I | CGCG | 1 cut(s) | 1301 |
| BshFI | GGCC | 2 cut(s) | 134, 1313 |
| BsiSI | CCGG | 1 cut(s) | 845 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1124 |
| BsmI | GAATGC | 2 cut(s) | 87, 803 |
| BsnI | GGCC | 2 cut(s) | 134, 1313 |
| Bsp119I | TTCGAA | 1 cut(s) | 1350 |
| Bsp1407I | TGTACA | 2 cut(s) | 550, 654 |
| Bsp143I | GATC | 5 cut(s) | 72, 684, 1066, 1135, 1407 |
| Bsp19I | CCATGG | 1 cut(s) | 1308 |
| BspACI | CCGC | 3 cut(s) | 1242, 1299, 1396 |
| BspANI | GGCC | 2 cut(s) | 134, 1313 |
| BspCNI | CTCAG | 2 cut(s) | 1210, 1240 |
| BspFNI | CGCG | 1 cut(s) | 1301 |
| BspPI | GGATC | 2 cut(s) | 67, 1130 |
| BspT104I | TTCGAA | 1 cut(s) | 1350 |
| BspTI | CTTAAG | 1 cut(s) | 206 |
| BsrGI | TGTACA | 2 cut(s) | 550, 654 |
| BsrI | ACTGG | 2 cut(s) | 705, 872 |
| BssECI | CCNNGG | 1 cut(s) | 1308 |
| BssMI | GATC | 5 cut(s) | 72, 684, 1066, 1135, 1407 |
| BssSI | CACGAG | 1 cut(s) | 563 |
| BssT1I | CCWWGG | 1 cut(s) | 1308 |
| Bst2BI | CACGAG | 1 cut(s) | 563 |
| Bst4CI | ACNGT | 5 cut(s) | 202, 789, 1148, 1270, 1464 |
| Bst6I | CTCTTC | 2 cut(s) | 21, 1031 |
| BstAFI | CTTAAG | 1 cut(s) | 206 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 283 |
| BstAUI | TGTACA | 2 cut(s) | 550, 654 |
| BstBI | TTCGAA | 1 cut(s) | 1350 |
| BstC8I | GCNNGC | 2 cut(s) | 1242, 1342 |
| BstDEI | CTNAG | 5 cut(s) | 359, 434, 661, 1218, 1248 |
| BstDSI | CCRYGG | 1 cut(s) | 1308 |
| BstF5I | GGATG | 3 cut(s) | 634, 1378, 1398 |
| BstFNI | CGCG | 1 cut(s) | 1301 |
| BstHHI | GCGC | 1 cut(s) | 7 |
| BstKTI | GATC | 5 cut(s) | 75, 687, 1069, 1138, 1410 |
| BstMBI | GATC | 5 cut(s) | 72, 684, 1066, 1135, 1407 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 283 |
| BstNSI | RCATGY | 1 cut(s) | 1213 |
| BstSFI | CTRYAG | 2 cut(s) | 785, 1005 |
| BstUI | CGCG | 1 cut(s) | 1301 |
| BstV1I | GCAGC | 3 cut(s) | 701, 838, 1224 |
| BstV2I | GAAGAC | 3 cut(s) | 3, 960, 1106 |
| BstX2I | RGATCY | 1 cut(s) | 1135 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 22 |
| BstYI | RGATCY | 1 cut(s) | 1135 |
| Bsu36I | CCTNAGG | 1 cut(s) | 661 |
| BsuRI | GGCC | 2 cut(s) | 134, 1313 |
| BtgI | CCRYGG | 1 cut(s) | 1308 |
| BtgZI | GCGATG | 1 cut(s) | 465 |
| BtsCI | GGATG | 3 cut(s) | 634, 1378, 1398 |
| BtsIMutI | CAGTG | 2 cut(s) | 1266, 1469 |
| Cac8I | GCNNGC | 2 cut(s) | 1242, 1342 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1268 |
| CfoI | GCGC | 1 cut(s) | 7 |
| Cfr13I | GGNCC | 1 cut(s) | 133 |
| Csp6I | GTAC | 4 cut(s) | 103, 551, 655, 698 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 111, 146 |
| CviAII | CATG | 6 cut(s) | 154, 811, 978, 1124, 1210, 1309 |
| CviQI | GTAC | 4 cut(s) | 103, 551, 655, 698 |
| DdeI | CTNAG | 5 cut(s) | 359, 434, 661, 1218, 1248 |
| DpnI | GATC | 5 cut(s) | 74, 686, 1068, 1137, 1409 |
| DpnII | GATC | 5 cut(s) | 72, 684, 1066, 1135, 1407 |
| EaeI | YGGCCR | 1 cut(s) | 1311 |
| Eam1104I | CTCTTC | 2 cut(s) | 21, 1031 |
| EarI | CTCTTC | 2 cut(s) | 21, 1031 |
| Eco130I | CCWWGG | 1 cut(s) | 1308 |
| Eco32I | GATATC | 1 cut(s) | 247 |
| Eco81I | CCTNAGG | 1 cut(s) | 661 |
| EcoRI | GAATTC | 2 cut(s) | 491, 1258 |
| EcoRV | GATATC | 1 cut(s) | 247 |
| EcoT14I | CCWWGG | 1 cut(s) | 1308 |
| EcoT22I | ATGCAT | 1 cut(s) | 89 |
| ErhI | CCWWGG | 1 cut(s) | 1308 |
| FaeI | CATG | 6 cut(s) | 157, 814, 981, 1127, 1213, 1312 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 879, 911 |
| FatI | CATG | 6 cut(s) | 153, 810, 977, 1123, 1209, 1308 |
| FauI | CCCGC | 2 cut(s) | 1249, 1306 |
| Fnu4HI | GCNGC | 3 cut(s) | 715, 852, 1238 |
| FokI | GGATG | 3 cut(s) | 621, 1385, 1385 |
| Fsp4HI | GCNGC | 3 cut(s) | 715, 852, 1238 |
| GlaI | GCGC | 1 cut(s) | 6 |
| GluI | GCNGC | 3 cut(s) | 715, 852, 1238 |
| HaeIII | GGCC | 2 cut(s) | 134, 1313 |
| HapII | CCGG | 1 cut(s) | 845 |
| HhaI | GCGC | 1 cut(s) | 7 |
| Hin1II | CATG | 6 cut(s) | 157, 814, 981, 1127, 1213, 1312 |
| Hin6I | GCGC | 1 cut(s) | 5 |
| HinP1I | GCGC | 1 cut(s) | 5 |
| HincII | GTYRAC | 3 cut(s) | 1215, 1384, 1437 |
| HindII | GTYRAC | 3 cut(s) | 1215, 1384, 1437 |
| HinfI | GANTC | 9 cut(s) | 78, 139, 581, 871, 890, 956, 1048, 1120, 1174 |
| HpaII | CCGG | 1 cut(s) | 845 |
| HphI | GGTGA | 3 cut(s) | 332, 898, 1069 |
| Hpy166II | GTNNAC | 6 cut(s) | 598, 655, 657, 1215, 1384, 1437 |
| Hpy188I | TCNGA | 6 cut(s) | 77, 244, 961, 1119, 1162, 1428 |
| Hpy188III | TCNNGA | 3 cut(s) | 51, 314, 563 |
| Hpy8I | GTNNAC | 6 cut(s) | 598, 655, 657, 1215, 1384, 1437 |
| Hpy99I | CGWCG | 1 cut(s) | 1074 |
| HpyAV | CCTTC | 2 cut(s) | 489, 905 |
| HpyCH4III | ACNGT | 5 cut(s) | 202, 789, 1148, 1270, 1464 |
| HpyCH4IV | ACGT | 3 cut(s) | 721, 1072, 1380 |
| HpyCH4V | TGCA | 7 cut(s) | 87, 183, 474, 668, 803, 854, 1451 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 283 |
| HpyF3I | CTNAG | 5 cut(s) | 359, 434, 661, 1218, 1248 |
| HpySE526I | ACGT | 3 cut(s) | 721, 1072, 1380 |
| Hsp92II | CATG | 6 cut(s) | 157, 814, 981, 1127, 1213, 1312 |
| HspAI | GCGC | 1 cut(s) | 5 |
| Kzo9I | GATC | 5 cut(s) | 72, 684, 1066, 1135, 1407 |
| LmnI | GCTCC | 3 cut(s) | 928, 1127, 1300 |
| LpnPI | CCDG | 9 cut(s) | 59, 149, 526, 686, 853, 858, 1218, 1326, 1380 |
| Lsp1109I | GCAGC | 3 cut(s) | 701, 838, 1224 |
| LweI | GCATC | 4 cut(s) | 192, 1327, 1363, 1407 |
| MaeII | ACGT | 3 cut(s) | 721, 1072, 1380 |
| MaeIII | GTNAC | 4 cut(s) | 560, 630, 863, 1040 |
| MalI | GATC | 5 cut(s) | 74, 686, 1068, 1137, 1409 |
| MboI | GATC | 5 cut(s) | 72, 684, 1066, 1135, 1407 |
| MflI | RGATCY | 1 cut(s) | 1135 |
| MlsI | TGGCCA | 1 cut(s) | 1313 |
| MluNI | TGGCCA | 1 cut(s) | 1313 |
| MlyI | GAGTC | 1 cut(s) | 950 |
| MmeI | TCCRAC | 1 cut(s) | 656 |
| Mox20I | TGGCCA | 1 cut(s) | 1313 |
| Mph1103I | ATGCAT | 1 cut(s) | 89 |
| MroXI | GAANNNNTTC | 1 cut(s) | 894 |
| MscI | TGGCCA | 1 cut(s) | 1313 |
| MseI | TTAA | 5 cut(s) | 147, 207, 741, 1274, 1483 |
| MslI | CAYNNNNRTG | 1 cut(s) | 417 |
| Msp20I | TGGCCA | 1 cut(s) | 1313 |
| MspA1I | CMGCKG | 1 cut(s) | 1237 |
| MspCI | CTTAAG | 1 cut(s) | 206 |
| MspI | CCGG | 1 cut(s) | 845 |
| Mva1269I | GAATGC | 2 cut(s) | 87, 803 |
| MvnI | CGCG | 1 cut(s) | 1301 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 283 |
| NcoI | CCATGG | 1 cut(s) | 1308 |
| NdeII | GATC | 5 cut(s) | 72, 684, 1066, 1135, 1407 |
| NlaIII | CATG | 6 cut(s) | 157, 814, 981, 1127, 1213, 1312 |
| NmuCI | GTSAC | 3 cut(s) | 560, 630, 863 |
| NsiI | ATGCAT | 1 cut(s) | 89 |
| NspI | RCATGY | 1 cut(s) | 1213 |
| NspV | TTCGAA | 1 cut(s) | 1350 |
| PciI | ACATGT | 1 cut(s) | 1209 |
| PctI | GAATGC | 2 cut(s) | 87, 803 |
| PdmI | GAANNNNTTC | 1 cut(s) | 894 |
| PfeI | GAWTC | 8 cut(s) | 78, 139, 581, 871, 890, 1048, 1120, 1174 |
| PkrI | GCNGC | 3 cut(s) | 716, 853, 1239 |
| PleI | GAGTC | 1 cut(s) | 950 |
| PpsI | GAGTC | 1 cut(s) | 950 |
| PscI | ACATGT | 1 cut(s) | 1209 |
| PsiI | TTATAA | 1 cut(s) | 113 |
| Psp1406I | AACGTT | 2 cut(s) | 721, 1380 |
| PspPI | GGNCC | 1 cut(s) | 133 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1268 |
| PsuI | RGATCY | 1 cut(s) | 1135 |
| PvuII | CAGCTG | 1 cut(s) | 1237 |
| RsaI | GTAC | 4 cut(s) | 104, 552, 656, 699 |
| RsaNI | GTAC | 4 cut(s) | 103, 551, 655, 698 |
| RseI | CAYNNNNRTG | 1 cut(s) | 417 |
| SaqAI | TTAA | 5 cut(s) | 147, 207, 741, 1274, 1483 |
| SatI | GCNGC | 3 cut(s) | 715, 852, 1238 |
| Sau3AI | GATC | 5 cut(s) | 72, 684, 1066, 1135, 1407 |
| Sau96I | GGNCC | 1 cut(s) | 133 |
| SchI | GAGTC | 1 cut(s) | 950 |
| SfaNI | GCATC | 4 cut(s) | 192, 1327, 1363, 1407 |
| SfcI | CTRYAG | 2 cut(s) | 785, 1005 |
| SfuI | TTCGAA | 1 cut(s) | 1350 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 417 |
| SmlI | CTYRAG | 2 cut(s) | 206, 1106 |
| SmoI | CTYRAG | 2 cut(s) | 206, 1106 |
| SsiI | CCGC | 3 cut(s) | 1242, 1299, 1396 |
| StyI | CCWWGG | 1 cut(s) | 1308 |
| TaaI | ACNGT | 5 cut(s) | 202, 789, 1148, 1270, 1464 |
| TaiI | ACGT | 3 cut(s) | 724, 1075, 1383 |
| TaqI | TCGA | 6 cut(s) | 50, 807, 936, 1069, 1350, 1445 |
| TatI | WGTACW | 3 cut(s) | 550, 654, 697 |
| TfiI | GAWTC | 8 cut(s) | 78, 139, 581, 871, 890, 1048, 1120, 1174 |
| Tru1I | TTAA | 5 cut(s) | 147, 207, 741, 1274, 1483 |
| Tru9I | TTAA | 5 cut(s) | 147, 207, 741, 1274, 1483 |
| TscAI | CASTG | 2 cut(s) | 1273, 1469 |
| TseFI | GTSAC | 3 cut(s) | 560, 630, 863 |
| TseI | GCWGC | 3 cut(s) | 714, 851, 1237 |
| Tsp45I | GTSAC | 3 cut(s) | 560, 630, 863 |
| TspDTI | ATGAA | 8 cut(s) | 170, 249, 279, 429, 509, 552, 966, 1112 |
| TspGWI | ACGGA | 2 cut(s) | 1011, 1472 |
| TspRI | CASTG | 2 cut(s) | 1273, 1469 |
| Vha464I | CTTAAG | 1 cut(s) | 206 |
| XapI | RAATTY | 6 cut(s) | 164, 237, 385, 491, 747, 1258 |
| XceI | RCATGY | 1 cut(s) | 1213 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1315 |
| XmnI | GAANNNNTTC | 1 cut(s) | 894 |
| Zsp2I | ATGCAT | 1 cut(s) | 89 |