Cyclic phosphodiesterase-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 27 |
| AcuI | CTGAAG | 1 cut(s) | 507 |
| AdeI | CACNNNGTG | 1 cut(s) | 116 |
| AfaI | GTAC | 3 cut(s) | 44, 281, 557 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 203 |
| AgsI | TTSAA | 1 cut(s) | 586 |
| AjnI | CCWGG | 1 cut(s) | 112 |
| AluBI | AGCT | 4 cut(s) | 287, 389, 485, 531 |
| AluI | AGCT | 4 cut(s) | 287, 389, 485, 531 |
| Alw21I | GWGCWC | 2 cut(s) | 237, 391 |
| Alw26I | GTCTC | 1 cut(s) | 267 |
| AoxI | GGCC | 4 cut(s) | 151, 159, 172, 431 |
| ApoI | RAATTY | 1 cut(s) | 27 |
| AspS9I | GGNCC | 3 cut(s) | 151, 159, 173 |
| AsuC2I | CCSGG | 2 cut(s) | 158, 176 |
| AsuHPI | GGTGA | 2 cut(s) | 128, 154 |
| BanII | GRGCYC | 2 cut(s) | 189, 391 |
| BauI | CACGAG | 1 cut(s) | 264 |
| Bbv12I | GWGCWC | 2 cut(s) | 237, 391 |
| BccI | CCATC | 1 cut(s) | 139 |
| BciT130I | CCWGG | 1 cut(s) | 114 |
| BcnI | CCSGG | 2 cut(s) | 158, 176 |
| BcoDI | GTCTC | 1 cut(s) | 267 |
| BfaI | CTAG | 1 cut(s) | 522 |
| BfmI | CTRYAG | 1 cut(s) | 257 |
| Bme1390I | CCNGG | 3 cut(s) | 114, 158, 176 |
| BmgT120I | GGNCC | 3 cut(s) | 151, 159, 173 |
| BmiI | GGNNCC | 1 cut(s) | 208 |
| BmrFI | CCNGG | 3 cut(s) | 114, 158, 176 |
| BpuMI | CCSGG | 2 cut(s) | 158, 176 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 37, 67 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 203 |
| Bse1I | ACTGG | 1 cut(s) | 325 |
| BseBI | CCWGG | 1 cut(s) | 114 |
| BseGI | GGATG | 2 cut(s) | 235, 514 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 203 |
| BseMII | CTCAG | 1 cut(s) | 98 |
| BseNI | ACTGG | 1 cut(s) | 325 |
| BshFI | GGCC | 4 cut(s) | 153, 161, 174, 433 |
| BsiHKAI | GWGCWC | 2 cut(s) | 237, 391 |
| BsiSI | CCGG | 2 cut(s) | 157, 176 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 203 |
| BsmAI | GTCTC | 1 cut(s) | 267 |
| BsnI | GGCC | 4 cut(s) | 153, 161, 174, 433 |
| Bsp1286I | GDGCHC | 3 cut(s) | 189, 237, 391 |
| Bsp1407I | TGTACA | 1 cut(s) | 555 |
| Bsp143I | GATC | 1 cut(s) | 180 |
| BspANI | GGCC | 4 cut(s) | 153, 161, 174, 433 |
| BspCNI | CTCAG | 1 cut(s) | 97 |
| BspLI | GGNNCC | 1 cut(s) | 208 |
| BspMAI | CTGCAG | 1 cut(s) | 261 |
| BsrGI | TGTACA | 1 cut(s) | 555 |
| BsrI | ACTGG | 1 cut(s) | 325 |
| BssMI | GATC | 1 cut(s) | 180 |
| BssSI | CACGAG | 1 cut(s) | 264 |
| Bst2BI | CACGAG | 1 cut(s) | 264 |
| Bst2UI | CCWGG | 1 cut(s) | 114 |
| Bst4CI | ACNGT | 1 cut(s) | 555 |
| Bst6I | CTCTTC | 2 cut(s) | 465, 470 |
| BstAUI | TGTACA | 1 cut(s) | 555 |
| BstC8I | GCNNGC | 1 cut(s) | 21 |
| BstDEI | CTNAG | 1 cut(s) | 84 |
| BstF5I | GGATG | 2 cut(s) | 235, 514 |
| BstKTI | GATC | 1 cut(s) | 183 |
| BstMAI | GTCTC | 1 cut(s) | 267 |
| BstMBI | GATC | 1 cut(s) | 180 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 522 |
| BstNI | CCWGG | 1 cut(s) | 114 |
| BstSCI | CCNGG | 3 cut(s) | 112, 156, 174 |
| BstSFI | CTRYAG | 1 cut(s) | 257 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 217, 410 |
| BsuRI | GGCC | 4 cut(s) | 153, 161, 174, 433 |
| BtsCI | GGATG | 2 cut(s) | 235, 514 |
| BtsIMutI | CAGTG | 2 cut(s) | 332, 551 |
| Cac8I | GCNNGC | 1 cut(s) | 21 |
| Cfr13I | GGNCC | 3 cut(s) | 151, 159, 173 |
| CsiI | ACCWGGT | 1 cut(s) | 112 |
| Csp6I | GTAC | 3 cut(s) | 43, 280, 556 |
| CviAII | CATG | 4 cut(s) | 8, 224, 360, 526 |
| CviQI | GTAC | 3 cut(s) | 43, 280, 556 |
| DdeI | CTNAG | 1 cut(s) | 84 |
| DpnI | GATC | 1 cut(s) | 182 |
| DpnII | GATC | 1 cut(s) | 180 |
| DraIII | CACNNNGTG | 1 cut(s) | 116 |
| Eam1104I | CTCTTC | 2 cut(s) | 465, 470 |
| EarI | CTCTTC | 2 cut(s) | 465, 470 |
| Ecl136II | GAGCTC | 1 cut(s) | 389 |
| Eco24I | GRGCYC | 2 cut(s) | 189, 391 |
| Eco53kI | GAGCTC | 1 cut(s) | 389 |
| Eco57I | CTGAAG | 1 cut(s) | 507 |
| EcoICRI | GAGCTC | 1 cut(s) | 389 |
| EcoO109I | RGGNCCY | 1 cut(s) | 151 |
| EcoRII | CCWGG | 1 cut(s) | 112 |
| EcoT38I | GRGCYC | 2 cut(s) | 189, 391 |
| FaeI | CATG | 4 cut(s) | 11, 227, 363, 529 |
| FatI | CATG | 4 cut(s) | 7, 223, 359, 525 |
| FokI | GGATG | 2 cut(s) | 242, 521 |
| FriOI | GRGCYC | 2 cut(s) | 189, 391 |
| FspBI | CTAG | 1 cut(s) | 522 |
| HaeIII | GGCC | 4 cut(s) | 153, 161, 174, 433 |
| HapII | CCGG | 2 cut(s) | 157, 176 |
| Hin1II | CATG | 4 cut(s) | 11, 227, 363, 529 |
| HinfI | GANTC | 5 cut(s) | 61, 82, 132, 347, 546 |
| HpaII | CCGG | 2 cut(s) | 157, 176 |
| HphI | GGTGA | 2 cut(s) | 128, 154 |
| Hpy166II | GTNNAC | 1 cut(s) | 45 |
| Hpy188I | TCNGA | 3 cut(s) | 40, 131, 462 |
| Hpy188III | TCNNGA | 2 cut(s) | 136, 506 |
| Hpy8I | GTNNAC | 1 cut(s) | 45 |
| HpyAV | CCTTC | 1 cut(s) | 133 |
| HpyCH4III | ACNGT | 1 cut(s) | 555 |
| HpyCH4V | TGCA | 4 cut(s) | 19, 259, 363, 399 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 522 |
| HpyF3I | CTNAG | 1 cut(s) | 84 |
| Hsp92II | CATG | 4 cut(s) | 11, 227, 363, 529 |
| Kzo9I | GATC | 1 cut(s) | 180 |
| LpnPI | CCDG | 9 cut(s) | 5, 85, 99, 126, 170, 189, 261, 338, 491 |
| MabI | ACCWGGT | 1 cut(s) | 112 |
| MaeI | CTAG | 1 cut(s) | 522 |
| MaeIII | GTNAC | 1 cut(s) | 62 |
| MalI | GATC | 1 cut(s) | 182 |
| MboI | GATC | 1 cut(s) | 180 |
| MboII | GAAGA | 6 cut(s) | 42, 479, 482, 487, 500, 610 |
| MhlI | GDGCHC | 3 cut(s) | 189, 237, 391 |
| MluCI | AATT | 5 cut(s) | 27, 105, 250, 270, 561 |
| MlyI | GAGTC | 4 cut(s) | 70, 76, 141, 540 |
| MnlI | CCTC | 5 cut(s) | 142, 164, 220, 455, 626 |
| MseI | TTAA | 1 cut(s) | 246 |
| MslI | CAYNNNNRTG | 3 cut(s) | 215, 228, 358 |
| MspI | CCGG | 2 cut(s) | 157, 176 |
| MspR9I | CCNGG | 3 cut(s) | 114, 158, 176 |
| MvaI | CCWGG | 1 cut(s) | 114 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 522 |
| NciI | CCSGG | 2 cut(s) | 158, 176 |
| NdeII | GATC | 1 cut(s) | 180 |
| NlaIII | CATG | 4 cut(s) | 11, 227, 363, 529 |
| NlaIV | GGNNCC | 1 cut(s) | 208 |
| NmeAIII | GCCGAG | 1 cut(s) | 187 |
| NmuCI | GTSAC | 1 cut(s) | 62 |
| PfeI | GAWTC | 1 cut(s) | 347 |
| PflFI | GACNNNGTC | 1 cut(s) | 85 |
| PleI | GAGTC | 4 cut(s) | 69, 76, 140, 540 |
| PpsI | GAGTC | 4 cut(s) | 69, 76, 140, 540 |
| Psp124BI | GAGCTC | 1 cut(s) | 391 |
| Psp6I | CCWGG | 1 cut(s) | 112 |
| PspGI | CCWGG | 1 cut(s) | 112 |
| PspN4I | GGNNCC | 1 cut(s) | 208 |
| PspPI | GGNCC | 3 cut(s) | 151, 159, 173 |
| PstI | CTGCAG | 1 cut(s) | 261 |
| PsyI | GACNNNGTC | 1 cut(s) | 85 |
| RsaI | GTAC | 3 cut(s) | 44, 281, 557 |
| RsaNI | GTAC | 3 cut(s) | 43, 280, 556 |
| RseI | CAYNNNNRTG | 3 cut(s) | 215, 228, 358 |
| SacI | GAGCTC | 1 cut(s) | 391 |
| SaqAI | TTAA | 1 cut(s) | 246 |
| Sau3AI | GATC | 1 cut(s) | 180 |
| Sau96I | GGNCC | 3 cut(s) | 151, 159, 173 |
| SchI | GAGTC | 4 cut(s) | 70, 76, 141, 540 |
| ScrFI | CCNGG | 3 cut(s) | 114, 158, 176 |
| SduI | GDGCHC | 3 cut(s) | 189, 237, 391 |
| SetI | ASST | 6 cut(s) | 118, 144, 289, 391, 487, 533 |
| SexAI | ACCWGGT | 1 cut(s) | 112 |
| SfcI | CTRYAG | 1 cut(s) | 257 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 215, 228, 358 |
| Sse9I | AATT | 5 cut(s) | 27, 105, 250, 270, 561 |
| SspI | AATATT | 2 cut(s) | 408, 502 |
| SspMI | CTAG | 1 cut(s) | 522 |
| SstI | GAGCTC | 1 cut(s) | 391 |
| StyD4I | CCNGG | 3 cut(s) | 112, 156, 174 |
| TaaI | ACNGT | 1 cut(s) | 555 |
| TaqI | TCGA | 5 cut(s) | 68, 183, 424, 544, 624 |
| TaqII | GACCGA | 1 cut(s) | 479 |
| TasI | AATT | 5 cut(s) | 27, 105, 250, 270, 561 |
| TatI | WGTACW | 2 cut(s) | 42, 555 |
| TfiI | GAWTC | 1 cut(s) | 347 |
| Tru1I | TTAA | 1 cut(s) | 246 |
| Tru9I | TTAA | 1 cut(s) | 246 |
| TscAI | CASTG | 2 cut(s) | 332, 558 |
| TseFI | GTSAC | 1 cut(s) | 62 |
| Tsp45I | GTSAC | 1 cut(s) | 62 |
| TspDTI | ATGAA | 2 cut(s) | 339, 525 |
| TspRI | CASTG | 2 cut(s) | 332, 558 |
| Tth111I | GACNNNGTC | 1 cut(s) | 85 |
| XapI | RAATTY | 1 cut(s) | 27 |
| XspI | CTAG | 1 cut(s) | 522 |