MD17G1255800.v1.1

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
31359657 .. 31360931
1275 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1255800.v1.1.491

Sequence Viewer

Length: 1275 bp
ATGGAGTTTGATTTAGTTTGTCTCTCAAACTGGTGGTGTTCTTTTATGTGTATATATATGTGTGAAGAATTTATGTGGAATAAAACTGCCGAGATGTCCCAGGTGCATGAAAGTGAAACTCCTGAAGATAAGGTGGTCGAAATCCTGTGTAGGTTGCCACCCAAGTCTCTGATGCGATTCAAATGCATACGGAAGTCTTGGTGCACTCTCATCAATAGACCAAGTTTTGTGGCCAAACACCTTAACAATTCTGTGGACAACAAACTCTCATCCTCCACTTGTATCCTTCTCAACCGTTCTCAGGCTCACATTTTCCCGGACCAGAGTTGGAAACAAGAAGTTTTCTGGTCCACGATTAATCTTTCCATTGATAGTGATGAACACAACCTTCATTATGATGTTGAGGACCTAATTATACCGTTTCCATTGGAAGATCATGATTTTGTACTGATTTTCGGTTATTGCAATGGGATTGTCTGTGTAGATGCAGGGAAAAATGTTCTTTTATGCAATCCTGCAACGAGAGAATTTAGGCAACTTCCGGATTCATGCCTTCTTCAACCCCCTCCCAAGGGAAAATTTGAATTGGAAACGACTTTTCAAGCATTAGGATTTGGCTATGATTGCAATGCTAAAGAATACAAGGTTGTGCGAATTGTGGAAAATTGTGAGTATTCAGATGATGAGCAAACATTTTATCATCGTATAGCACTTCCTCACACAGCTGAGGTATATACCACGGCTGCTAACTTTTGGAAAGAGATCAAGATTGATATATCAATTAAAACCTATCATTGTTCTTGTTCAGTGTACTTGAAGGGATTTTGTTATTGGTTTGCAAGCGATAACGAGGAATACATACTTGCATTTTATTTAGGTGATGAGACATTTCATATAATACAATTGCCTTCTAGGAGAGAATCCGGTTTTACGTTTGATTATATTTTTCTGCGAAATGAATCCCTTGCTTCTTTTTGCTCTCCCTATAATCCAAGTGAGGATTCTAAATTATTTGAAATATGGGTAATGGACGACTATGATGGAGTTAGCAGTTCATGGACAAAACTCCTAACTGTTGGACCCTTTAAAGGCGTTGAGTATCCTTTGACACTTTGGAAATGTGATGAGCTTCTTATGCTTGCATCCGATGGAAGGGCTACCTCTTATAATTCTAGTACCGGAAATCTTAAGTATCTTCATATTCCTCCTATTCTCAATAAGGTTGTGGATTTTGAAGGTCTTATTTATGTGAAAAGTATTGTTCCACTCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

425

Amino Acids

49.16

Weight (kDa)

5.02

Isoelectric Point (pI)

47.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 126 - 358 4e-27 F-box associated beta propeller domain
FBA_3 PF08268 133 - 356 1.4e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1167
AccIII TCCGGA 1 cut(s) 541
AcoI YGGCCR 1 cut(s) 231
AcsI RAATTY 3 cut(s) 68, 527, 578
AcuI CTGAAG 1 cut(s) 144
AfaI GTAC 3 cut(s) 447, 812, 1177
AfiI CCNNNNNNNGG 5 cut(s) 301, 571, 572, 1088, 1152
AflII CTTAAG 1 cut(s) 1187
AgsI TTSAA 7 cut(s) 181, 560, 584, 602, 817, 1016, 1235
AjnI CCWGG 1 cut(s) 99
AjuI GAANNNNNNNTTGG 2 cut(s) 985, 1017
AleI CACNNNNGTG 1 cut(s) 1270
AluBI AGCT 2 cut(s) 725, 1129
AluI AGCT 2 cut(s) 725, 1129
Alw21I GWGCWC 1 cut(s) 206
Alw26I GTCTC 3 cut(s) 26, 171, 878
Alw44I GTGCAC 1 cut(s) 202
Aor13HI TCCGGA 1 cut(s) 541
AoxI GGCC 1 cut(s) 231
ApaLI GTGCAC 1 cut(s) 202
ApeKI GCWGC 1 cut(s) 743
ApoI RAATTY 3 cut(s) 68, 527, 578
AseI ATTAAT 1 cut(s) 357
AspS9I GGNCC 4 cut(s) 319, 348, 406, 1079
AsuC2I CCSGG 1 cut(s) 317
AsuHPI GGTGA 1 cut(s) 890
AvaII GGWCC 4 cut(s) 319, 348, 406, 1079
BaeGI GKGCMC 1 cut(s) 206
BalI TGGCCA 1 cut(s) 233
Bbv12I GWGCWC 1 cut(s) 206
BbvCI CCTCAGC 1 cut(s) 726
BbvI GCAGC 1 cut(s) 730
BccI CCATC 2 cut(s) 1034, 1142
BceAI ACGGC 1 cut(s) 756
BcgI CGANNNNNNTGC 2 cut(s) 165, 199
BciT130I CCWGG 1 cut(s) 101
BciVI GTATCC 2 cut(s) 293, 1110
BcnI CCSGG 1 cut(s) 317
BcoDI GTCTC 3 cut(s) 26, 171, 878
BfaI CTAG 2 cut(s) 912, 1173
BfrI CTTAAG 1 cut(s) 1187
BfuI GTATCC 2 cut(s) 293, 1110
BisI GCNGC 1 cut(s) 744
BlsI GCNGC 1 cut(s) 745
Bme1390I CCNGG 2 cut(s) 101, 317
Bme18I GGWCC 4 cut(s) 319, 348, 406, 1079
BmgT120I GGNCC 4 cut(s) 319, 348, 406, 1079
BmiI GGNNCC 1 cut(s) 1081
BmrFI CCNGG 2 cut(s) 101, 317
BmsI GCATC 3 cut(s) 162, 475, 1151
Bpu10I CCTNAGC 1 cut(s) 726
BpuEI CTTGAG 1 cut(s) 1253
BpuMI CCSGG 1 cut(s) 317
BsaJI CCNNGG 3 cut(s) 99, 570, 738
BsaWI WCCGGW 3 cut(s) 541, 923, 1178
Bsc4I CCNNNNNNNGG 5 cut(s) 301, 571, 572, 1088, 1152
Bse1I ACTGG 1 cut(s) 35
Bse3DI GCAATG 2 cut(s) 472, 634
BseAI TCCGGA 1 cut(s) 541
BseBI CCWGG 1 cut(s) 101
BseDI CCNNGG 3 cut(s) 99, 570, 738
BseGI GGATG 2 cut(s) 269, 1142
BseLI CCNNNNNNNGG 5 cut(s) 301, 571, 572, 1088, 1152
BseMI GCAATG 2 cut(s) 472, 634
BseMII CTCAG 2 cut(s) 314, 717
BseNI ACTGG 1 cut(s) 35
BseSI GKGCMC 1 cut(s) 206
BseXI GCAGC 1 cut(s) 730
BshFI GGCC 1 cut(s) 233
BsiHKAI GWGCWC 1 cut(s) 206
BsiSI CCGG 4 cut(s) 317, 542, 924, 1179
BslFI GGGAC 1 cut(s) 82
BslI CCNNNNNNNGG 5 cut(s) 301, 571, 572, 1088, 1152
BsmAI GTCTC 3 cut(s) 26, 171, 878
BsmFI GGGAC 1 cut(s) 82
BsnI GGCC 1 cut(s) 233
Bsp1286I GDGCHC 1 cut(s) 206
Bsp13I TCCGGA 1 cut(s) 541
Bsp143I GATC 2 cut(s) 433, 762
BspANI GGCC 1 cut(s) 233
BspCNI CTCAG 2 cut(s) 313, 718
BspEI TCCGGA 1 cut(s) 541
BspHI TCATGA 1 cut(s) 436
BspLI GGNNCC 1 cut(s) 1081
BspTI CTTAAG 1 cut(s) 1187
BsrDI GCAATG 2 cut(s) 472, 634
BsrI ACTGG 1 cut(s) 35
BssECI CCNNGG 3 cut(s) 99, 570, 738
BssMI GATC 2 cut(s) 433, 762
BssT1I CCWWGG 1 cut(s) 570
Bst2UI CCWGG 1 cut(s) 101
Bst4CI ACNGT 3 cut(s) 296, 420, 1075
BstAFI CTTAAG 1 cut(s) 1187
BstC8I GCNNGC 2 cut(s) 841, 1140
BstDEI CTNAG 2 cut(s) 300, 726
BstDSI CCRYGG 1 cut(s) 738
BstF5I GGATG 2 cut(s) 269, 1142
BstKTI GATC 2 cut(s) 436, 765
BstMAI GTCTC 3 cut(s) 26, 171, 878
BstMBI GATC 2 cut(s) 433, 762
BstMWI GCNNNNNNNGC 2 cut(s) 624, 1135
BstNI CCWGG 1 cut(s) 101
BstSCI CCNGG 2 cut(s) 99, 315
BstSLI GKGCMC 1 cut(s) 206
BstV1I GCAGC 1 cut(s) 730
BsuI GTATCC 2 cut(s) 293, 1110
BsuRI GGCC 1 cut(s) 233
BtgI CCRYGG 1 cut(s) 738
BtsCI GGATG 2 cut(s) 269, 1142
BtsIMutI CAGTG 1 cut(s) 813
Cac8I GCNNGC 2 cut(s) 841, 1140
CciI TCATGA 1 cut(s) 436
Cfr13I GGNCC 4 cut(s) 319, 348, 406, 1079
Csp6I GTAC 3 cut(s) 446, 811, 1176
CspCI CAANNNNNGTGG 2 cut(s) 210, 245
CviAII CATG 4 cut(s) 107, 437, 549, 1056
CviJI RGCY 7 cut(s) 233, 305, 618, 725, 743, 1129, 1157
CviKI_1 RGCY 7 cut(s) 233, 305, 618, 725, 743, 1129, 1157
CviQI GTAC 3 cut(s) 446, 811, 1176
DdeI CTNAG 2 cut(s) 300, 726
DpnI GATC 2 cut(s) 435, 764
DpnII GATC 2 cut(s) 433, 762
DraI TTTAAA 1 cut(s) 1087
EaeI YGGCCR 1 cut(s) 231
Eco130I CCWWGG 1 cut(s) 570
Eco47I GGWCC 4 cut(s) 319, 348, 406, 1079
Eco57I CTGAAG 1 cut(s) 144
EcoO109I RGGNCCY 1 cut(s) 406
EcoRII CCWGG 1 cut(s) 99
EcoT14I CCWWGG 1 cut(s) 570
EcoT22I ATGCAT 1 cut(s) 188
ErhI CCWWGG 1 cut(s) 570
FaeI CATG 4 cut(s) 110, 440, 552, 1059
FaqI GGGAC 1 cut(s) 82
FatI CATG 4 cut(s) 106, 436, 548, 1055
Fnu4HI GCNGC 1 cut(s) 744
FokI GGATG 2 cut(s) 256, 1129
Fsp4HI GCNGC 1 cut(s) 744
FspBI CTAG 2 cut(s) 912, 1173
GluI GCNGC 1 cut(s) 744
HaeIII GGCC 1 cut(s) 233
HapII CCGG 4 cut(s) 317, 542, 924, 1179
Hin1II CATG 4 cut(s) 110, 440, 552, 1059
HinfI GANTC 5 cut(s) 177, 545, 920, 959, 1001
HpaII CCGG 4 cut(s) 317, 542, 924, 1179
HphI GGTGA 1 cut(s) 890
Hpy166II GTNNAC 4 cut(s) 204, 256, 351, 811
Hpy188I TCNGA 3 cut(s) 171, 679, 1147
Hpy188III TCNNGA 4 cut(s) 122, 437, 542, 766
Hpy8I GTNNAC 4 cut(s) 204, 256, 351, 811
HpyAV CCTTC 7 cut(s) 296, 398, 563, 811, 918, 1146, 1229
HpyCH4III ACNGT 3 cut(s) 296, 420, 1075
HpyCH4IV ACGT 1 cut(s) 932
HpyF10VI GCNNNNNNNGC 2 cut(s) 624, 1135
HpyF3I CTNAG 2 cut(s) 300, 726
HpySE526I ACGT 1 cut(s) 932
Hsp92II CATG 4 cut(s) 110, 440, 552, 1059
Kpn2I TCCGGA 1 cut(s) 541
Kzo9I GATC 2 cut(s) 433, 762
Lsp1109I GCAGC 1 cut(s) 730
LweI GCATC 3 cut(s) 162, 475, 1151
MaeI CTAG 2 cut(s) 912, 1173
MaeII ACGT 1 cut(s) 932
MalI GATC 2 cut(s) 435, 764
MboI GATC 2 cut(s) 433, 762
MboII GAAGA 5 cut(s) 77, 137, 443, 548, 1187
MfeI CAATTG 1 cut(s) 902
MhlI GDGCHC 1 cut(s) 206
MlsI TGGCCA 1 cut(s) 233
MluNI TGGCCA 1 cut(s) 233
MmeI TCCRAC 2 cut(s) 308, 1057
MnlI CCTC 9 cut(s) 283, 397, 576, 721, 726, 844, 991, 1171, 1215
Mox20I TGGCCA 1 cut(s) 233
Mph1103I ATGCAT 1 cut(s) 188
MroI TCCGGA 1 cut(s) 541
MscI TGGCCA 1 cut(s) 233
MseI TTAA 5 cut(s) 243, 357, 783, 1086, 1188
MslI CAYNNNNRTG 3 cut(s) 111, 396, 1270
Msp20I TGGCCA 1 cut(s) 233
MspA1I CMGCKG 1 cut(s) 725
MspCI CTTAAG 1 cut(s) 1187
MspI CCGG 4 cut(s) 317, 542, 924, 1179
MspR9I CCNGG 2 cut(s) 101, 317
MunI CAATTG 1 cut(s) 902
MvaI CCWGG 1 cut(s) 101
MwoI GCNNNNNNNGC 2 cut(s) 624, 1135
NciI CCSGG 1 cut(s) 317
NdeII GATC 2 cut(s) 433, 762
NlaIII CATG 4 cut(s) 110, 440, 552, 1059
NlaIV GGNNCC 1 cut(s) 1081
NmeAIII GCCGAG 1 cut(s) 115
NsiI ATGCAT 1 cut(s) 188
OliI CACNNNNGTG 1 cut(s) 1270
PagI TCATGA 1 cut(s) 436
PfeI GAWTC 5 cut(s) 177, 545, 920, 959, 1001
PfoI TCCNGGA 1 cut(s) 315
PkrI GCNGC 1 cut(s) 745
PpuMI RGGWCCY 1 cut(s) 406
PshBI ATTAAT 1 cut(s) 357
PsiI TTATAA 1 cut(s) 1167
Psp5II RGGWCCY 1 cut(s) 406
Psp6I CCWGG 1 cut(s) 99
PspGI CCWGG 1 cut(s) 99
PspN4I GGNNCC 1 cut(s) 1081
PspPI GGNCC 4 cut(s) 319, 348, 406, 1079
PspPPI RGGWCCY 1 cut(s) 406
PvuII CAGCTG 1 cut(s) 725
RsaI GTAC 3 cut(s) 447, 812, 1177
RsaNI GTAC 3 cut(s) 446, 811, 1176
RseI CAYNNNNRTG 3 cut(s) 111, 396, 1270
SaqAI TTAA 5 cut(s) 243, 357, 783, 1086, 1188
SatI GCNGC 1 cut(s) 744
Sau3AI GATC 2 cut(s) 433, 762
Sau96I GGNCC 4 cut(s) 319, 348, 406, 1079
ScrFI CCNGG 2 cut(s) 101, 317
SduI GDGCHC 1 cut(s) 206
SfaNI GCATC 3 cut(s) 162, 475, 1151
SinI GGWCC 4 cut(s) 319, 348, 406, 1079
SmiMI CAYNNNNRTG 3 cut(s) 111, 396, 1270
SmlI CTYRAG 2 cut(s) 1187, 1268
SmoI CTYRAG 2 cut(s) 1187, 1268
SspMI CTAG 2 cut(s) 912, 1173
StyD4I CCNGG 2 cut(s) 99, 315
StyI CCWWGG 1 cut(s) 570
TaaI ACNGT 3 cut(s) 296, 420, 1075
TaiI ACGT 1 cut(s) 935
TaqI TCGA 1 cut(s) 138
TatI WGTACW 2 cut(s) 445, 810
TfiI GAWTC 5 cut(s) 177, 545, 920, 959, 1001
Tru1I TTAA 5 cut(s) 243, 357, 783, 1086, 1188
Tru9I TTAA 5 cut(s) 243, 357, 783, 1086, 1188
TscAI CASTG 1 cut(s) 813
TseI GCWGC 1 cut(s) 743
TspDTI ATGAA 8 cut(s) 123, 380, 393, 537, 881, 972, 1044, 1187
TspGWI ACGGA 1 cut(s) 205
TspRI CASTG 1 cut(s) 813
Vha464I CTTAAG 1 cut(s) 1187
VneI GTGCAC 1 cut(s) 202
VpaK11BI GGWCC 4 cut(s) 319, 348, 406, 1079
VspI ATTAAT 1 cut(s) 357
XapI RAATTY 3 cut(s) 68, 527, 578
XspI CTAG 2 cut(s) 912, 1173
Zsp2I ATGCAT 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.