Cyclic phosphodiesterase-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 122 |
| AclWI | GGATC | 1 cut(s) | 74 |
| AfaI | GTAC | 1 cut(s) | 383 |
| AflIII | ACRYGT | 1 cut(s) | 157 |
| AluBI | AGCT | 1 cut(s) | 218 |
| AluI | AGCT | 1 cut(s) | 218 |
| Alw21I | GWGCWC | 1 cut(s) | 171 |
| Alw26I | GTCTC | 2 cut(s) | 63, 198 |
| AlwI | GGATC | 1 cut(s) | 74 |
| Ama87I | CYCGRG | 1 cut(s) | 318 |
| AoxI | GGCC | 2 cut(s) | 85, 107 |
| ApeKI | GCWGC | 1 cut(s) | 371 |
| AspS9I | GGNCC | 2 cut(s) | 85, 107 |
| AsuHPI | GGTGA | 1 cut(s) | 247 |
| AsuII | TTCGAA | 2 cut(s) | 148, 345 |
| AvaI | CYCGRG | 1 cut(s) | 318 |
| BauI | CACGAG | 1 cut(s) | 195 |
| Bbv12I | GWGCWC | 1 cut(s) | 171 |
| BbvI | GCAGC | 1 cut(s) | 358 |
| BclI | TGATCA | 1 cut(s) | 237 |
| BcoDI | GTCTC | 2 cut(s) | 63, 198 |
| BfaI | CTAG | 1 cut(s) | 359 |
| BglII | AGATCT | 1 cut(s) | 182 |
| BisI | GCNGC | 2 cut(s) | 122, 372 |
| BlsI | GCNGC | 2 cut(s) | 123, 373 |
| BmcAI | AGTACT | 1 cut(s) | 383 |
| BmeT110I | CYCGRG | 1 cut(s) | 318 |
| BmgT120I | GGNCC | 2 cut(s) | 85, 107 |
| BmsI | GCATC | 1 cut(s) | 383 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 301, 333 |
| BpmI | CTGGAG | 1 cut(s) | 173 |
| Bpu14I | TTCGAA | 2 cut(s) | 148, 345 |
| BsaWI | WCCGGW | 1 cut(s) | 90 |
| Bse1I | ACTGG | 3 cut(s) | 190, 207, 256 |
| Bse3DI | GCAATG | 1 cut(s) | 16 |
| BseGI | GGATG | 2 cut(s) | 169, 281 |
| BseMI | GCAATG | 1 cut(s) | 16 |
| BseNI | ACTGG | 3 cut(s) | 190, 207, 256 |
| BseXI | GCAGC | 1 cut(s) | 358 |
| BshFI | GGCC | 2 cut(s) | 87, 109 |
| BsiHKAI | GWGCWC | 1 cut(s) | 171 |
| BsiHKCI | CYCGRG | 1 cut(s) | 318 |
| BsiSI | CCGG | 1 cut(s) | 91 |
| BsmAI | GTCTC | 2 cut(s) | 63, 198 |
| BsnI | GGCC | 2 cut(s) | 87, 109 |
| BsoBI | CYCGRG | 1 cut(s) | 318 |
| Bsp119I | TTCGAA | 2 cut(s) | 148, 345 |
| Bsp1286I | GDGCHC | 1 cut(s) | 171 |
| Bsp143I | GATC | 3 cut(s) | 66, 182, 237 |
| BspACI | CCGC | 1 cut(s) | 122 |
| BspANI | GGCC | 2 cut(s) | 87, 109 |
| BspPI | GGATC | 1 cut(s) | 74 |
| BspT104I | TTCGAA | 2 cut(s) | 148, 345 |
| BsrDI | GCAATG | 1 cut(s) | 16 |
| BsrI | ACTGG | 3 cut(s) | 190, 207, 256 |
| BssMI | GATC | 3 cut(s) | 66, 182, 237 |
| BssSI | CACGAG | 1 cut(s) | 195 |
| Bst2BI | CACGAG | 1 cut(s) | 195 |
| Bst4CI | ACNGT | 2 cut(s) | 133, 381 |
| BstBI | TTCGAA | 2 cut(s) | 148, 345 |
| BstDEI | CTNAG | 1 cut(s) | 62 |
| BstF5I | GGATG | 2 cut(s) | 169, 281 |
| BstKTI | GATC | 3 cut(s) | 69, 185, 240 |
| BstMAI | GTCTC | 2 cut(s) | 63, 198 |
| BstMBI | GATC | 3 cut(s) | 66, 182, 237 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 320 |
| BstNSI | RCATGY | 1 cut(s) | 161 |
| BstV1I | GCAGC | 1 cut(s) | 358 |
| BstX2I | RGATCY | 1 cut(s) | 182 |
| BstYI | RGATCY | 1 cut(s) | 182 |
| BsuRI | GGCC | 2 cut(s) | 87, 109 |
| BtsCI | GGATG | 2 cut(s) | 169, 281 |
| BtsIMutI | CAGTG | 1 cut(s) | 263 |
| Cfr13I | GGNCC | 2 cut(s) | 85, 107 |
| Csp6I | GTAC | 1 cut(s) | 382 |
| CviAII | CATG | 2 cut(s) | 79, 158 |
| CviJI | RGCY | 5 cut(s) | 87, 109, 121, 218, 323 |
| CviKI_1 | RGCY | 5 cut(s) | 87, 109, 121, 218, 323 |
| CviQI | GTAC | 1 cut(s) | 382 |
| DdeI | CTNAG | 1 cut(s) | 62 |
| DpnI | GATC | 3 cut(s) | 68, 184, 239 |
| DpnII | GATC | 3 cut(s) | 66, 182, 237 |
| Eco88I | CYCGRG | 1 cut(s) | 318 |
| EcoO109I | RGGNCCY | 1 cut(s) | 85 |
| FaeI | CATG | 2 cut(s) | 82, 161 |
| FaiI | YATR | 6 cut(s) | 34, 80, 159, 307, 332, 334 |
| FatI | CATG | 2 cut(s) | 78, 157 |
| FbaI | TGATCA | 1 cut(s) | 237 |
| Fnu4HI | GCNGC | 2 cut(s) | 122, 372 |
| FokI | GGATG | 2 cut(s) | 176, 268 |
| Fsp4HI | GCNGC | 2 cut(s) | 122, 372 |
| FspBI | CTAG | 1 cut(s) | 359 |
| GluI | GCNGC | 2 cut(s) | 122, 372 |
| GsuI | CTGGAG | 1 cut(s) | 173 |
| HaeIII | GGCC | 2 cut(s) | 87, 109 |
| HapII | CCGG | 1 cut(s) | 91 |
| Hin1II | CATG | 2 cut(s) | 82, 161 |
| HinfI | GANTC | 2 cut(s) | 278, 293 |
| HpaII | CCGG | 1 cut(s) | 91 |
| HphI | GGTGA | 1 cut(s) | 247 |
| Hpy188I | TCNGA | 1 cut(s) | 97 |
| Hpy188III | TCNNGA | 2 cut(s) | 70, 241 |
| HpyAV | CCTTC | 1 cut(s) | 67 |
| HpyCH4III | ACNGT | 2 cut(s) | 133, 381 |
| HpyCH4V | TGCA | 1 cut(s) | 374 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 320 |
| HpyF3I | CTNAG | 1 cut(s) | 62 |
| Hsp92II | CATG | 2 cut(s) | 82, 161 |
| Ksp22I | TGATCA | 1 cut(s) | 237 |
| Kzo9I | GATC | 3 cut(s) | 66, 182, 237 |
| LpnPI | CCDG | 9 cut(s) | 60, 104, 123, 203, 215, 220, 226, 269, 337 |
| Lsp1109I | GCAGC | 1 cut(s) | 358 |
| LweI | GCATC | 1 cut(s) | 383 |
| MaeI | CTAG | 1 cut(s) | 359 |
| MaeIII | GTNAC | 2 cut(s) | 199, 209 |
| MalI | GATC | 3 cut(s) | 68, 184, 239 |
| MboI | GATC | 3 cut(s) | 66, 182, 237 |
| MflI | RGATCY | 1 cut(s) | 182 |
| MhlI | GDGCHC | 1 cut(s) | 171 |
| MlyI | GAGTC | 1 cut(s) | 302 |
| MnlI | CCTC | 4 cut(s) | 76, 98, 278, 399 |
| MseI | TTAA | 1 cut(s) | 225 |
| MslI | CAYNNNNRTG | 1 cut(s) | 162 |
| MspI | CCGG | 1 cut(s) | 91 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 320 |
| NdeII | GATC | 3 cut(s) | 66, 182, 237 |
| NlaIII | CATG | 2 cut(s) | 82, 161 |
| NspI | RCATGY | 1 cut(s) | 161 |
| NspV | TTCGAA | 2 cut(s) | 148, 345 |
| PaeR7I | CTCGAG | 1 cut(s) | 318 |
| PciI | ACATGT | 1 cut(s) | 157 |
| PfeI | GAWTC | 1 cut(s) | 278 |
| PkrI | GCNGC | 2 cut(s) | 123, 373 |
| PleI | GAGTC | 1 cut(s) | 301 |
| PpsI | GAGTC | 1 cut(s) | 301 |
| PscI | ACATGT | 1 cut(s) | 157 |
| PspPI | GGNCC | 2 cut(s) | 85, 107 |
| PspXI | VCTCGAGB | 1 cut(s) | 318 |
| PsuI | RGATCY | 1 cut(s) | 182 |
| RsaI | GTAC | 1 cut(s) | 383 |
| RsaNI | GTAC | 1 cut(s) | 382 |
| RseI | CAYNNNNRTG | 1 cut(s) | 162 |
| SaqAI | TTAA | 1 cut(s) | 225 |
| SatI | GCNGC | 2 cut(s) | 122, 372 |
| Sau3AI | GATC | 3 cut(s) | 66, 182, 237 |
| Sau96I | GGNCC | 2 cut(s) | 85, 107 |
| ScaI | AGTACT | 1 cut(s) | 383 |
| SchI | GAGTC | 1 cut(s) | 302 |
| SduI | GDGCHC | 1 cut(s) | 171 |
| SetI | ASST | 3 cut(s) | 78, 220, 234 |
| SfaNI | GCATC | 1 cut(s) | 383 |
| Sfr274I | CTCGAG | 1 cut(s) | 318 |
| SfuI | TTCGAA | 2 cut(s) | 148, 345 |
| SlaI | CTCGAG | 1 cut(s) | 318 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 162 |
| SmlI | CTYRAG | 1 cut(s) | 318 |
| SmoI | CTYRAG | 1 cut(s) | 318 |
| SsiI | CCGC | 1 cut(s) | 122 |
| SspMI | CTAG | 1 cut(s) | 359 |
| TaaI | ACNGT | 2 cut(s) | 133, 381 |
| TaqI | TCGA | 3 cut(s) | 148, 319, 345 |
| TatI | WGTACW | 1 cut(s) | 381 |
| TauI | GCSGC | 1 cut(s) | 124 |
| TfiI | GAWTC | 1 cut(s) | 278 |
| Tru1I | TTAA | 1 cut(s) | 225 |
| Tru9I | TTAA | 1 cut(s) | 225 |
| TscAI | CASTG | 1 cut(s) | 263 |
| TseI | GCWGC | 1 cut(s) | 371 |
| TspDTI | ATGAA | 2 cut(s) | 27, 270 |
| TspGWI | ACGGA | 1 cut(s) | 356 |
| TspRI | CASTG | 1 cut(s) | 263 |
| XceI | RCATGY | 1 cut(s) | 161 |
| XhoI | CTCGAG | 1 cut(s) | 318 |
| XspI | CTAG | 1 cut(s) | 359 |
| ZrmI | AGTACT | 1 cut(s) | 383 |