Rroxscaffold_6G00422850

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
43638097 .. 43639341
1245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00422850.1

Sequence Viewer

Length: 1245 bp
ATGGTGGAAATCCTGTCAAGGCTCCCTCCAAAATCTCTGATGCGATTCAAGTGCGTCCGTAAATCCTGGCAATGTTTGATCAATAACTCCGACTTCGCAGCCAGACACCTCTCCATTACCAAGAACAACAAACATCCATCCTCCATTACAATAGCTTTCACCCGTCGTGTCCTTGAAGACATCAACTCTAGCAAGAAGAGAATTTTATTGTCGTTATTCGATGTTTCCCATTGTAATGATGGTGATGATGAACTTGATCCTATTGTCGAGGATATCCACAGTCCGGTATCTGCCGGTTTGGTAGATTGGCAACGTTTCCGTGTAAATATTTCAACTCATTGTGATGGAATACTATGTCTAACTGATGGTGGAAAATACATTGTTTTATGCAATCCAGCAATCAAGGAGTTCAAGCTTTTGCCCGTGCCTTCTTCGAAATCTATTTCATATGGTGAGGGATTTGGTTATGATCTCAAATCGAAAGATTACAAAGTTGTTCGAATTTTATATAATGGGCGGGAAGAGTATATGGATGGTATGCATAAGCGTGTTGTTATTCGTCCTCCCACAGTAGAAGTATACAGCCTCCTTACAAATTCTTGGAAAGAAATCAAGATTGATAATTTAATAACGAAAACTACCATCTATTGGCCCCAGTCATATGTTTCCGTATACCACAAGGGTATTCTTTATTGGTGTGGACATGAAGAACTCCGACGAAAGAATTTCATTGTCAGCGACTATTCAGAAGATGAAGAGGATGATGAAAGTGAGATGAAAGATAGCATTATTTCGTTTGATATAGGGGACGAGGCATTTTATGTTTTATCGTTCCCAGGTGATTGTCGTTTATATGGTTGTGGGCTTGGATTATGGAAAGAATCAATTGCTCTTTGTACTTCTGGTCCTCGGAGTCCTGATCCATCAACGAAGGAGACTCTGGAGATATGGTTGATGGATGACCTTGGTGGTGGTGAGGGTTCTTGGACAAAATACTTGACCTTTGAGCCGGTAGTAGCTCACATTATAGGTCAATTGGGATTATTTTGGGACAATAAGCAATTAATTACTATTTTCAAGAACAACTGTGCAGTGATCTTTTATGAAGTTTGTACCAACAAGTTTAAATGTCTTCCTCTGAACACCGAGATTCTGGATTATTCTCAAGCTGTTGAATGTACGAGAAGTATAGTTTCCATCAAAGGAGGTACTAGGCTTGATAGCCATGATGAGGCAGCGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

414

Amino Acids

47.16

Weight (kDa)

5.66

Isoelectric Point (pI)

51.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 86 - 381 3.6e-27 F-box associated beta propeller domain
FBA_3 PF08268 90 - 377 1.6e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 648
AccI GTMKAC 2 cut(s) 579, 672
AciI CCGC 1 cut(s) 517
AclI AACGTT 1 cut(s) 313
AclWI GGATC 2 cut(s) 251, 914
AcsI RAATTY 4 cut(s) 201, 501, 595, 724
AfaI GTAC 4 cut(s) 898, 1114, 1180, 1210
AfiI CCNNNNNNNGG 3 cut(s) 283, 648, 1231
AgsI TTSAA 6 cut(s) 49, 176, 333, 412, 1078, 1175
AjnI CCWGG 2 cut(s) 65, 835
AluBI AGCT 4 cut(s) 155, 415, 1019, 1169
AluI AGCT 4 cut(s) 155, 415, 1019, 1169
Alw26I GTCTC 1 cut(s) 929
AlwI GGATC 2 cut(s) 251, 914
AoxI GGCC 1 cut(s) 650
ApeKI GCWGC 2 cut(s) 98, 1235
ApoI RAATTY 4 cut(s) 201, 501, 595, 724
AseI ATTAAT 1 cut(s) 1064
AspS9I GGNCC 2 cut(s) 651, 905
AsuHPI GGTGA 5 cut(s) 151, 254, 464, 851, 986
AsuII TTCGAA 2 cut(s) 434, 499
AvaII GGWCC 1 cut(s) 905
BbsI GAAGAC 2 cut(s) 183, 1124
BbvI GCAGC 1 cut(s) 110
BccI CCATC 9 cut(s) 145, 233, 338, 359, 527, 650, 931, 949, 1205
BcgI CGANNNNNNTGC 2 cut(s) 33, 67
BciT130I CCWGG 2 cut(s) 67, 837
BclI TGATCA 1 cut(s) 78
BcoDI GTCTC 1 cut(s) 929
BfaI CTAG 2 cut(s) 189, 1212
BisI GCNGC 2 cut(s) 99, 1236
BlsI GCNGC 2 cut(s) 100, 1237
Bme1390I CCNGG 2 cut(s) 67, 837
Bme18I GGWCC 1 cut(s) 905
BmgT120I GGNCC 2 cut(s) 651, 905
BmiI GGNNCC 2 cut(s) 23, 653
BmrFI CCNGG 2 cut(s) 67, 837
BmrI ACTGGG 1 cut(s) 649
BmsI GCATC 1 cut(s) 30
BmuI ACTGGG 1 cut(s) 649
BpiI GAAGAC 2 cut(s) 183, 1124
BpmI CTGGAG 1 cut(s) 962
Bpu14I TTCGAA 2 cut(s) 434, 499
BpuEI CTTGAG 1 cut(s) 1149
BsaJI CCNNGG 3 cut(s) 835, 908, 964
BsaWI WCCGGW 1 cut(s) 283
BsaXI ACNNNNNCTCC 2 cut(s) 935, 965
Bsc4I CCNNNNNNNGG 3 cut(s) 283, 648, 1231
Bse118I RCCGGY 2 cut(s) 293, 1009
Bse1I ACTGG 1 cut(s) 655
Bse3DI GCAATG 1 cut(s) 77
BseBI CCWGG 2 cut(s) 67, 837
BseDI CCNNGG 3 cut(s) 835, 908, 964
BseGI GGATG 5 cut(s) 133, 137, 538, 766, 964
BseLI CCNNNNNNNGG 3 cut(s) 283, 648, 1231
BseMI GCAATG 1 cut(s) 77
BseNI ACTGG 1 cut(s) 655
BseXI GCAGC 1 cut(s) 110
BsgI GTGCAG 1 cut(s) 1110
BshFI GGCC 1 cut(s) 652
BsiSI CCGG 3 cut(s) 284, 294, 1010
BslFI GGGAC 2 cut(s) 821, 1064
BslI CCNNNNNNNGG 3 cut(s) 283, 648, 1231
BsmAI GTCTC 1 cut(s) 929
BsmFI GGGAC 2 cut(s) 821, 1064
BsnI GGCC 1 cut(s) 652
Bsp119I TTCGAA 2 cut(s) 434, 499
Bsp143I GATC 5 cut(s) 78, 256, 469, 919, 1095
BspACI CCGC 1 cut(s) 517
BspANI GGCC 1 cut(s) 652
BspLI GGNNCC 2 cut(s) 23, 653
BspPI GGATC 2 cut(s) 251, 914
BspT104I TTCGAA 2 cut(s) 434, 499
BsrDI GCAATG 1 cut(s) 77
BsrFI RCCGGY 2 cut(s) 293, 1009
BsrI ACTGG 1 cut(s) 655
BssAI RCCGGY 2 cut(s) 293, 1009
BssECI CCNNGG 3 cut(s) 835, 908, 964
BssMI GATC 5 cut(s) 78, 256, 469, 919, 1095
BssNAI GTATAC 2 cut(s) 580, 673
BssT1I CCWWGG 1 cut(s) 964
Bst1107I GTATAC 2 cut(s) 580, 673
Bst2UI CCWGG 2 cut(s) 67, 837
Bst4CI ACNGT 3 cut(s) 281, 571, 1088
Bst6I CTCTTC 3 cut(s) 191, 516, 750
BstBI TTCGAA 2 cut(s) 434, 499
BstF5I GGATG 5 cut(s) 133, 137, 538, 766, 964
BstKTI GATC 5 cut(s) 81, 259, 472, 922, 1098
BstMAI GTCTC 1 cut(s) 929
BstMBI GATC 5 cut(s) 78, 256, 469, 919, 1095
BstNI CCWGG 2 cut(s) 67, 837
BstSCI CCNGG 2 cut(s) 65, 835
BstV1I GCAGC 1 cut(s) 110
BstV2I GAAGAC 2 cut(s) 183, 1124
BstZ17I GTATAC 2 cut(s) 580, 673
BsuRI GGCC 1 cut(s) 652
BtsCI GGATG 5 cut(s) 133, 137, 538, 766, 964
BtsI GCAGTG 1 cut(s) 1098
BtsIMutI CAGTG 1 cut(s) 1098
Cfr10I RCCGGY 2 cut(s) 293, 1009
Cfr13I GGNCC 2 cut(s) 651, 905
CseI GACGC 1 cut(s) 43
Csp6I GTAC 4 cut(s) 897, 1113, 1179, 1209
CviAII CATG 2 cut(s) 704, 1226
CviQI GTAC 4 cut(s) 897, 1113, 1179, 1209
DpnI GATC 5 cut(s) 80, 258, 471, 921, 1097
DpnII GATC 5 cut(s) 78, 256, 469, 919, 1095
DraI TTTAAA 1 cut(s) 1126
Eam1104I CTCTTC 3 cut(s) 191, 516, 750
EarI CTCTTC 3 cut(s) 191, 516, 750
Eco130I CCWWGG 1 cut(s) 964
Eco32I GATATC 1 cut(s) 274
Eco47I GGWCC 1 cut(s) 905
EcoRII CCWGG 2 cut(s) 65, 835
EcoRV GATATC 1 cut(s) 274
EcoT14I CCWWGG 1 cut(s) 964
EcoT22I ATGCAT 1 cut(s) 543
ErhI CCWWGG 1 cut(s) 964
FaeI CATG 2 cut(s) 707, 1229
FaqI GGGAC 2 cut(s) 821, 1064
FatI CATG 2 cut(s) 703, 1225
FauI CCCGC 1 cut(s) 510
FauNDI CATATG 2 cut(s) 448, 661
FbaI TGATCA 1 cut(s) 78
FblI GTMKAC 2 cut(s) 579, 672
Fnu4HI GCNGC 2 cut(s) 99, 1236
FokI GGATG 5 cut(s) 120, 124, 545, 773, 971
Fsp4HI GCNGC 2 cut(s) 99, 1236
FspBI CTAG 2 cut(s) 189, 1212
GluI GCNGC 2 cut(s) 99, 1236
GsuI CTGGAG 1 cut(s) 962
HaeIII GGCC 1 cut(s) 652
HapII CCGG 3 cut(s) 284, 294, 1010
HgaI GACGC 1 cut(s) 43
Hin1II CATG 2 cut(s) 707, 1229
HindIII AAGCTT 1 cut(s) 413
HinfI GANTC 5 cut(s) 45, 881, 913, 937, 1150
HpaII CCGG 3 cut(s) 284, 294, 1010
HphI GGTGA 5 cut(s) 151, 254, 464, 851, 986
Hpy166II GTNNAC 3 cut(s) 580, 673, 701
Hpy188I TCNGA 6 cut(s) 39, 91, 716, 748, 912, 1140
Hpy188III TCNNGA 5 cut(s) 613, 917, 941, 1078, 1154
Hpy8I GTNNAC 3 cut(s) 580, 673, 701
Hpy99I CGWCG 2 cut(s) 168, 720
HpyAV CCTTC 2 cut(s) 438, 925
HpyCH4III ACNGT 3 cut(s) 281, 571, 1088
HpyCH4IV ACGT 1 cut(s) 313
HpyCH4V TGCA 3 cut(s) 390, 541, 1091
HpySE526I ACGT 1 cut(s) 313
Hsp92II CATG 2 cut(s) 707, 1229
Ksp22I TGATCA 1 cut(s) 78
Kzo9I GATC 5 cut(s) 78, 256, 469, 919, 1095
LmnI GCTCC 1 cut(s) 27
Lsp1109I GCAGC 1 cut(s) 110
LweI GCATC 1 cut(s) 30
MaeI CTAG 2 cut(s) 189, 1212
MaeII ACGT 1 cut(s) 313
MalI GATC 5 cut(s) 80, 258, 471, 921, 1097
MboI GATC 5 cut(s) 78, 256, 469, 919, 1095
MboII GAAGA 8 cut(s) 188, 208, 423, 533, 719, 761, 767, 1124
MfeI CAATTG 2 cut(s) 885, 1034
MluCI AATT 9 cut(s) 201, 501, 595, 622, 724, 885, 1034, 1061, 1065
MlyI GAGTC 2 cut(s) 922, 931
MmeI TCCRAC 2 cut(s) 114, 739
Mph1103I ATGCAT 1 cut(s) 543
MseI TTAA 3 cut(s) 626, 1064, 1125
MslI CAYNNNNRTG 3 cut(s) 234, 342, 546
MspI CCGG 3 cut(s) 284, 294, 1010
MspR9I CCNGG 2 cut(s) 67, 837
MunI CAATTG 2 cut(s) 885, 1034
MvaI CCWGG 2 cut(s) 67, 837
NdeI CATATG 2 cut(s) 448, 661
NdeII GATC 5 cut(s) 78, 256, 469, 919, 1095
NlaIII CATG 2 cut(s) 707, 1229
NlaIV GGNNCC 2 cut(s) 23, 653
NsiI ATGCAT 1 cut(s) 543
NspV TTCGAA 2 cut(s) 434, 499
PfeI GAWTC 3 cut(s) 45, 881, 1150
PflMI CCANNNNNTGG 1 cut(s) 648
PkrI GCNGC 2 cut(s) 100, 1237
PleI GAGTC 2 cut(s) 921, 931
PpsI GAGTC 2 cut(s) 921, 931
PshBI ATTAAT 1 cut(s) 1064
Psp1406I AACGTT 1 cut(s) 313
Psp6I CCWGG 2 cut(s) 65, 835
PspGI CCWGG 2 cut(s) 65, 835
PspN4I GGNNCC 2 cut(s) 23, 653
PspPI GGNCC 2 cut(s) 651, 905
RsaI GTAC 4 cut(s) 898, 1114, 1180, 1210
RsaNI GTAC 4 cut(s) 897, 1113, 1179, 1209
RseI CAYNNNNRTG 3 cut(s) 234, 342, 546
SaqAI TTAA 3 cut(s) 626, 1064, 1125
SatI GCNGC 2 cut(s) 99, 1236
Sau3AI GATC 5 cut(s) 78, 256, 469, 919, 1095
Sau96I GGNCC 2 cut(s) 651, 905
SchI GAGTC 2 cut(s) 922, 931
ScrFI CCNGG 2 cut(s) 67, 837
SfaNI GCATC 1 cut(s) 30
SfuI TTCGAA 2 cut(s) 434, 499
SinI GGWCC 1 cut(s) 905
SmiMI CAYNNNNRTG 3 cut(s) 234, 342, 546
SmlI CTYRAG 1 cut(s) 1164
SmoI CTYRAG 1 cut(s) 1164
Sse9I AATT 9 cut(s) 201, 501, 595, 622, 724, 885, 1034, 1061, 1065
SsiI CCGC 1 cut(s) 517
SspI AATATT 1 cut(s) 328
SspMI CTAG 2 cut(s) 189, 1212
StyD4I CCNGG 2 cut(s) 65, 835
StyI CCWWGG 1 cut(s) 964
TaaI ACNGT 3 cut(s) 281, 571, 1088
TaiI ACGT 1 cut(s) 316
TaqI TCGA 5 cut(s) 219, 267, 434, 479, 499
TasI AATT 9 cut(s) 201, 501, 595, 622, 724, 885, 1034, 1061, 1065
TatI WGTACW 1 cut(s) 896
TfiI GAWTC 3 cut(s) 45, 881, 1150
Tru1I TTAA 3 cut(s) 626, 1064, 1125
Tru9I TTAA 3 cut(s) 626, 1064, 1125
TscAI CASTG 1 cut(s) 1098
TseI GCWGC 2 cut(s) 98, 1235
TspDTI ATGAA 8 cut(s) 264, 435, 718, 720, 768, 780, 791, 1119
TspGWI ACGGA 3 cut(s) 47, 308, 658
TspRI CASTG 1 cut(s) 1098
Van91I CCANNNNNTGG 1 cut(s) 648
VpaK11BI GGWCC 1 cut(s) 905
VspI ATTAAT 1 cut(s) 1064
XapI RAATTY 4 cut(s) 201, 501, 595, 724
XcmI CCANNNNNNNNNTGG 1 cut(s) 236
XmiI GTMKAC 2 cut(s) 579, 672
XspI CTAG 2 cut(s) 189, 1212
Zsp2I ATGCAT 1 cut(s) 543
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.