MD17G1255900.v1.1

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
31556491 .. 31557690
1200 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1255900.v1.1.491

Sequence Viewer

Length: 1200 bp
ATGTGGAATAATACAGTTGAAATGTCCCAGGTGCGTGAATGTGAAACTCCTGAAGATAAGGTGGTTGAAATCCTGTCCAAGTTGCCGCCCAAGTCTCTGATTAGATTCAAATGCATACGCAAGTCTTGGTGCACTATCATCAATAGTCCAAGTTTTGTGGCCAAACACCTCAGAATTTCCATGGACAACAAACTCTCATCCACCACTTGTATCCTTCTCAACCGTTGTCAGGTTCATGTTTTCCCGGACAGGAGTTGGAAACAAGACGTTTTCTGGTCCATGACTAATCTTTCCATTGATAGTGATGAGCACAACCTTCATTATGATGTTGAGGACCTAAATATACCGTTTCCAATGGAAGATCAAGACAATGTAGAGATTCACGGTTATTGCAATGGGATTGTCTGTGTAATAGTAGGGAAAAATGTTCTTTTATGCAATCCTGCAACGAGAGAATTCAGGCAACTTCCCAATTCATCTCTTCTTCTACCCCTTCCCAAGGGAAGATTCGGATTGGAAACGACCTTTAAAGGAATGGGATTTGGCTATGATTGCAAAACTAAAGAATACAAGGTTGTGCGAATTATAGAAAATTGTGATTGTGAGTATTCAGAAGATGGAGAATCATACTATGAGCGTATTCTTCTTCCTCACACGGCTGAGGTATACACCACAACTGCTAACTCTTGGAAAGAGATTAAGATTGATATATCAATTGAAACTCGTTGGTATTGCATTCCTTATTCTTGTTCAGTGTACTTGAAGGGATTTTGTTATTGGTTTGCATACGATAACGGGGAGTACGTATTTTCATTTGATTTAGGTGATGAGATATTTCATAGAATAGAATTGCCTTCTAGGAGAGAATCCGATTTCAAGTTTTATGGTATTTTTCTGTATAATGAATCCGTCACTTCGTATTGCTATCGTCATGAAGAGGATTGTGAATTATTTGAAATATGGGTAATGGACGACTATGATGGAGTTAAGAGTTCATGGACAAAACAGCTAACGATTGGACCCCTTAAAGACATTGATTATCCATTGACACTTTGGAAATGTGACGAGATTCTTATGCTTGGCTCATATGGAAGAGCCGCCTCTTGTAATTCTAGTACTGGAAATCTCAAGTATCTTCATATTCCCCCTATTATCAATTGGATGATAGATTATGTGAAAAGTATTGTTCCAGTCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

400

Amino Acids

46.61

Weight (kDa)

5.2

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 96 - 345 1.8e-27 F-box associated beta propeller domain
FBA_3 PF08268 98 - 339 1.6e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 666
AciI CCGC 2 cut(s) 86, 1098
AcoI YGGCCR 1 cut(s) 159
AcsI RAATTY 2 cut(s) 174, 455
AcuI CTGAAG 1 cut(s) 72
AfaI GTAC 3 cut(s) 758, 803, 1117
AfiI CCNNNNNNNGG 2 cut(s) 229, 499
AgsI TTSAA 7 cut(s) 20, 68, 109, 719, 763, 877, 956
AjnI CCWGG 1 cut(s) 27
AjuI GAANNNNNNNTTGG 2 cut(s) 491, 523
AluBI AGCT 1 cut(s) 1009
AluI AGCT 1 cut(s) 1009
Alw21I GWGCWC 2 cut(s) 134, 312
Alw26I GTCTC 1 cut(s) 99
Alw44I GTGCAC 1 cut(s) 130
AoxI GGCC 1 cut(s) 159
ApaLI GTGCAC 1 cut(s) 130
ApoI RAATTY 2 cut(s) 174, 455
AspS9I GGNCC 3 cut(s) 276, 334, 1019
AsuC2I CCSGG 1 cut(s) 245
AsuHPI GGTGA 1 cut(s) 836
AvaII GGWCC 3 cut(s) 276, 334, 1019
BaeGI GKGCMC 1 cut(s) 134
BalI TGGCCA 1 cut(s) 161
Bbv12I GWGCWC 2 cut(s) 134, 312
BbvCI CCTCAGC 1 cut(s) 660
BccI CCATC 2 cut(s) 611, 974
BceAI ACGGC 1 cut(s) 672
BciT130I CCWGG 1 cut(s) 29
BciVI GTATCC 1 cut(s) 221
BcnI CCSGG 1 cut(s) 245
BcoDI GTCTC 1 cut(s) 99
BfaI CTAG 2 cut(s) 858, 1113
BfuI GTATCC 1 cut(s) 221
BisI GCNGC 2 cut(s) 86, 1098
BlsI GCNGC 2 cut(s) 87, 1099
BmcAI AGTACT 1 cut(s) 1117
Bme1390I CCNGG 2 cut(s) 29, 245
Bme18I GGWCC 3 cut(s) 276, 334, 1019
BmgT120I GGNCC 3 cut(s) 276, 334, 1019
BmiI GGNNCC 1 cut(s) 1021
BmrFI CCNGG 2 cut(s) 29, 245
Bpu10I CCTNAGC 1 cut(s) 660
BpuEI CTTGAG 1 cut(s) 1112
BpuMI CCSGG 1 cut(s) 245
BsaAI YACGTR 1 cut(s) 805
BsaJI CCNNGG 3 cut(s) 27, 180, 498
Bsc4I CCNNNNNNNGG 2 cut(s) 229, 499
Bse1I ACTGG 2 cut(s) 1123, 1190
Bse3DI GCAATG 1 cut(s) 400
BseBI CCWGG 1 cut(s) 29
BseDI CCNNGG 3 cut(s) 27, 180, 498
BseGI GGATG 2 cut(s) 197, 1167
BseLI CCNNNNNNNGG 2 cut(s) 229, 499
BseMI GCAATG 1 cut(s) 400
BseMII CTCAG 2 cut(s) 184, 651
BseNI ACTGG 2 cut(s) 1123, 1190
BseSI GKGCMC 1 cut(s) 134
BshFI GGCC 1 cut(s) 161
BsiHKAI GWGCWC 2 cut(s) 134, 312
BsiSI CCGG 1 cut(s) 245
BslFI GGGAC 1 cut(s) 10
BslI CCNNNNNNNGG 2 cut(s) 229, 499
BsmAI GTCTC 1 cut(s) 99
BsmFI GGGAC 1 cut(s) 10
BsmI GAATGC 1 cut(s) 735
BsnI GGCC 1 cut(s) 161
Bsp1286I GDGCHC 2 cut(s) 134, 312
Bsp143I GATC 1 cut(s) 361
Bsp19I CCATGG 1 cut(s) 180
BspACI CCGC 2 cut(s) 86, 1098
BspANI GGCC 1 cut(s) 161
BspCNI CTCAG 2 cut(s) 183, 652
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 1 cut(s) 1021
BspQI GCTCTTC 1 cut(s) 1087
BsrDI GCAATG 1 cut(s) 400
BsrI ACTGG 2 cut(s) 1123, 1190
BssECI CCNNGG 3 cut(s) 27, 180, 498
BssMI GATC 1 cut(s) 361
BssNAI GTATAC 1 cut(s) 667
BssT1I CCWWGG 2 cut(s) 180, 498
Bst1107I GTATAC 1 cut(s) 667
Bst2UI CCWGG 1 cut(s) 29
Bst4CI ACNGT 4 cut(s) 16, 224, 348, 386
Bst6I CTCTTC 3 cut(s) 486, 930, 1087
BstBAI YACGTR 1 cut(s) 805
BstDEI CTNAG 2 cut(s) 170, 660
BstDSI CCRYGG 1 cut(s) 180
BstENI CCTNNNNNAGG 1 cut(s) 497
BstF5I GGATG 2 cut(s) 197, 1167
BstKTI GATC 1 cut(s) 364
BstMAI GTCTC 1 cut(s) 99
BstMBI GATC 1 cut(s) 361
BstMWI GCNNNNNNNGC 1 cut(s) 552
BstNI CCWGG 1 cut(s) 29
BstSCI CCNGG 2 cut(s) 27, 243
BstSLI GKGCMC 1 cut(s) 134
BstSNI TACGTA 1 cut(s) 805
BstZ17I GTATAC 1 cut(s) 667
BsuI GTATCC 1 cut(s) 221
BsuRI GGCC 1 cut(s) 161
BtgI CCRYGG 1 cut(s) 180
BtsCI GGATG 2 cut(s) 197, 1167
BtsIMutI CAGTG 1 cut(s) 759
CciI TCATGA 1 cut(s) 931
Cfr13I GGNCC 3 cut(s) 276, 334, 1019
Csp6I GTAC 3 cut(s) 757, 802, 1116
CspCI CAANNNNNGTGG 2 cut(s) 138, 173
CviAII CATG 5 cut(s) 181, 236, 280, 932, 996
CviJI RGCY 6 cut(s) 161, 546, 659, 1009, 1083, 1097
CviKI_1 RGCY 6 cut(s) 161, 546, 659, 1009, 1083, 1097
CviQI GTAC 3 cut(s) 757, 802, 1116
DdeI CTNAG 2 cut(s) 170, 660
DpnI GATC 1 cut(s) 363
DpnII GATC 1 cut(s) 361
DraI TTTAAA 1 cut(s) 529
EaeI YGGCCR 1 cut(s) 159
Eam1104I CTCTTC 3 cut(s) 486, 930, 1087
EarI CTCTTC 3 cut(s) 486, 930, 1087
Eco105I TACGTA 1 cut(s) 805
Eco130I CCWWGG 2 cut(s) 180, 498
Eco47I GGWCC 3 cut(s) 276, 334, 1019
Eco57I CTGAAG 1 cut(s) 72
EcoNI CCTNNNNNAGG 1 cut(s) 497
EcoO109I RGGNCCY 1 cut(s) 334
EcoRI GAATTC 1 cut(s) 455
EcoRII CCWGG 1 cut(s) 27
EcoT14I CCWWGG 2 cut(s) 180, 498
EcoT22I ATGCAT 1 cut(s) 116
ErhI CCWWGG 2 cut(s) 180, 498
FaeI CATG 5 cut(s) 184, 239, 283, 935, 999
FaqI GGGAC 1 cut(s) 10
FatI CATG 5 cut(s) 180, 235, 279, 931, 995
FauNDI CATATG 1 cut(s) 1087
FblI GTMKAC 1 cut(s) 666
Fnu4HI GCNGC 2 cut(s) 86, 1098
FokI GGATG 2 cut(s) 184, 1174
Fsp4HI GCNGC 2 cut(s) 86, 1098
FspBI CTAG 2 cut(s) 858, 1113
GluI GCNGC 2 cut(s) 86, 1098
HaeIII GGCC 1 cut(s) 161
HapII CCGG 1 cut(s) 245
Hin1II CATG 5 cut(s) 184, 239, 283, 935, 999
HinfI GANTC 7 cut(s) 105, 379, 507, 623, 866, 905, 1069
HpaII CCGG 1 cut(s) 245
HphI GGTGA 1 cut(s) 836
Hpy166II GTNNAC 3 cut(s) 132, 667, 757
Hpy188I TCNGA 5 cut(s) 99, 173, 512, 613, 871
Hpy188III TCNNGA 3 cut(s) 50, 365, 932
Hpy8I GTNNAC 3 cut(s) 132, 667, 757
HpyAV CCTTC 5 cut(s) 224, 326, 503, 757, 864
HpyCH4III ACNGT 4 cut(s) 16, 224, 348, 386
HpyCH4IV ACGT 2 cut(s) 267, 804
HpyCH4V TGCA 8 cut(s) 114, 132, 393, 438, 446, 555, 735, 785
HpyF10VI GCNNNNNNNGC 1 cut(s) 552
HpyF3I CTNAG 2 cut(s) 170, 660
HpySE526I ACGT 2 cut(s) 267, 804
Hsp92II CATG 5 cut(s) 184, 239, 283, 935, 999
Kzo9I GATC 1 cut(s) 361
LguI GCTCTTC 1 cut(s) 1087
MaeI CTAG 2 cut(s) 858, 1113
MaeII ACGT 2 cut(s) 267, 804
MaeIII GTNAC 2 cut(s) 910, 1061
MalI GATC 1 cut(s) 363
MboI GATC 1 cut(s) 361
MfeI CAATTG 2 cut(s) 714, 1156
MhlI GDGCHC 2 cut(s) 134, 312
MlsI TGGCCA 1 cut(s) 161
MluNI TGGCCA 1 cut(s) 161
MmeI TCCRAC 1 cut(s) 236
MnlI CCTC 6 cut(s) 179, 325, 655, 660, 931, 1111
Mox20I TGGCCA 1 cut(s) 161
Mph1103I ATGCAT 1 cut(s) 116
MscI TGGCCA 1 cut(s) 161
MseI TTAA 4 cut(s) 528, 699, 987, 1026
MslI CAYNNNNRTG 1 cut(s) 324
Msp20I TGGCCA 1 cut(s) 161
MspI CCGG 1 cut(s) 245
MspR9I CCNGG 2 cut(s) 29, 245
MunI CAATTG 2 cut(s) 714, 1156
Mva1269I GAATGC 1 cut(s) 735
MvaI CCWGG 1 cut(s) 29
MwoI GCNNNNNNNGC 1 cut(s) 552
NciI CCSGG 1 cut(s) 245
NcoI CCATGG 1 cut(s) 180
NdeI CATATG 1 cut(s) 1087
NdeII GATC 1 cut(s) 361
NlaIII CATG 5 cut(s) 184, 239, 283, 935, 999
NlaIV GGNNCC 1 cut(s) 1021
NmuCI GTSAC 2 cut(s) 910, 1061
NsiI ATGCAT 1 cut(s) 116
PagI TCATGA 1 cut(s) 931
PciSI GCTCTTC 1 cut(s) 1087
PcsI WCGNNNNNNNCGW 1 cut(s) 801
PctI GAATGC 1 cut(s) 735
PfeI GAWTC 7 cut(s) 105, 379, 507, 623, 866, 905, 1069
PfoI TCCNGGA 1 cut(s) 243
PkrI GCNGC 2 cut(s) 87, 1099
Ppu21I YACGTR 1 cut(s) 805
PpuMI RGGWCCY 1 cut(s) 334
Psp5II RGGWCCY 1 cut(s) 334
Psp6I CCWGG 1 cut(s) 27
PspGI CCWGG 1 cut(s) 27
PspN4I GGNNCC 1 cut(s) 1021
PspPI GGNCC 3 cut(s) 276, 334, 1019
PspPPI RGGWCCY 1 cut(s) 334
RsaI GTAC 3 cut(s) 758, 803, 1117
RsaNI GTAC 3 cut(s) 757, 802, 1116
RseI CAYNNNNRTG 1 cut(s) 324
SapI GCTCTTC 1 cut(s) 1087
SaqAI TTAA 4 cut(s) 528, 699, 987, 1026
SatI GCNGC 2 cut(s) 86, 1098
Sau3AI GATC 1 cut(s) 361
Sau96I GGNCC 3 cut(s) 276, 334, 1019
ScaI AGTACT 1 cut(s) 1117
ScrFI CCNGG 2 cut(s) 29, 245
SduI GDGCHC 2 cut(s) 134, 312
SinI GGWCC 3 cut(s) 276, 334, 1019
SmiMI CAYNNNNRTG 1 cut(s) 324
SmlI CTYRAG 1 cut(s) 1127
SmoI CTYRAG 1 cut(s) 1127
SnaBI TACGTA 1 cut(s) 805
SsiI CCGC 2 cut(s) 86, 1098
SspMI CTAG 2 cut(s) 858, 1113
StyD4I CCNGG 2 cut(s) 27, 243
StyI CCWWGG 2 cut(s) 180, 498
TaaI ACNGT 4 cut(s) 16, 224, 348, 386
TaiI ACGT 2 cut(s) 270, 807
TatI WGTACW 2 cut(s) 756, 1115
TauI GCSGC 2 cut(s) 88, 1100
TfiI GAWTC 7 cut(s) 105, 379, 507, 623, 866, 905, 1069
Tru1I TTAA 4 cut(s) 528, 699, 987, 1026
Tru9I TTAA 4 cut(s) 528, 699, 987, 1026
TscAI CASTG 1 cut(s) 759
TseFI GTSAC 2 cut(s) 910, 1061
Tsp45I GTSAC 2 cut(s) 910, 1061
TspDTI ATGAA 9 cut(s) 224, 308, 465, 801, 827, 918, 948, 984, 1127
TspGWI ACGGA 1 cut(s) 898
TspRI CASTG 1 cut(s) 759
VneI GTGCAC 1 cut(s) 130
VpaK11BI GGWCC 3 cut(s) 276, 334, 1019
XagI CCTNNNNNAGG 1 cut(s) 497
XapI RAATTY 2 cut(s) 174, 455
XcmI CCANNNNNNNNNTGG 1 cut(s) 1050
XmiI GTMKAC 1 cut(s) 666
XspI CTAG 2 cut(s) 858, 1113
ZrmI AGTACT 1 cut(s) 1117
Zsp2I ATGCAT 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.