MD17G1252200.v1.1

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
30458136 .. 30459335
1200 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1252200.v1.1.491

Sequence Viewer

Length: 1200 bp
ATGTCTCAGGTGTATGAAAGTGAAACTCCTAATAGCGTGGTCGAAACACTGTCTAGGTTGCCGCCCAAATCTCTGATGCGATTCAAATGCATACGCAAGTCTTGGTGCACTCTCATCAATAGTCTAAGTTTTGTGGCCAAACACCTCAACAATTCTGTGGACAACAAACTATCATCCTCCACTTGCATCCTTCTCAACCGTTCTCAGGCTCATGTTTTCCCGGATAACAGTTGGAAACCAGAAGTTTTCTGGTCCATCATTAATCTTTACATTGATAGTGATGAGCACAACCTTCATTATGATGTTGAGGACCTAAATATACCGTTTCCATTGGAAGGTCATGATTTTGTAGAGATTGACGGCTATTGCAATGGGATTGTCTGTGTAATAGCAGGGAAAAATCTTCATTTGATAAATGTTCTTTTATGCAATCCTGCAACGGGGGAATTCAGGCAACTTCCGCATTCATGCCTTCTTTTACCTTCCCGTCCTAAGGGAAAATTCGAATTGGAGACGATCTTTGGAGCATTAGGATTTGGTTATGATTGCAAAACTGAAGAATACAAGGTTGTGCAAATTATAGAAAATTGTGAGTATTCAGATGATCAGCAATACTATTATCATCGTATTGCTCTTCCTCACACGGCTGAGGTATATACTATGGTTGCTAACTCTTGGAGAGAGATCAAGATTGATATATCAAGTGAAACCTATCATTATTCTTTTTCAGTGTACTTGAAGGGATTTTGTTATTGGTTTGCAACCGATGGCGAGAAATACATACTTTCATTTGATTTAGGTGATGAGATATTTCATAGAATACAATTGCCTTCTAGAAGAGAATCCAATTTTGAGTTTTCTAATATTTTTCTATGTGATAAATCGATTGCTTCTTTTTGCTCTTGTTGCGATCCAAGTGATGCGGATTCTACATTATGTGAAGTATGGGTACTAGATGATTATGATGGAGTTAAGAGTTCATGGACGAAACTCCTAACCTTTGGACCCTTAAAAGGCATTGAGAATCCATTTACATTTTGGAAAACTAATGAACTTCTTATGGTAGCCTCCGGTGGAAGAGCCACTTCTTATAATTCCAGTACCAGAAATCTCAACTATCTTCATATTCCTCCTATTCTCAATGAAGTTAGAGATTTCCAAGCTCTTATTTATGTGGAAAGTATTGTTCCAGTCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

400

Amino Acids

45.81

Weight (kDa)

5.19

Isoelectric Point (pI)

42.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 102 - 331 8.2e-18 F-box associated beta propeller domain
FBA_1 PF07734 117 - 354 2.9e-24 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1092
AciI CCGC 3 cut(s) 62, 461, 923
AclWI GGATC 1 cut(s) 905
AcoI YGGCCR 1 cut(s) 135
AcsI RAATTY 2 cut(s) 446, 500
AcuI CTGAAG 1 cut(s) 576
AfaI GTAC 3 cut(s) 734, 951, 1102
AfiI CCNNNNNNNGG 5 cut(s) 205, 335, 440, 493, 1013
AgsI TTSAA 2 cut(s) 85, 739
AluBI AGCT 1 cut(s) 1163
AluI AGCT 1 cut(s) 1163
Alw21I GWGCWC 2 cut(s) 110, 288
Alw26I GTCTC 2 cut(s) 9, 506
Alw44I GTGCAC 1 cut(s) 106
AlwI GGATC 1 cut(s) 905
AoxI GGCC 1 cut(s) 135
ApaLI GTGCAC 1 cut(s) 106
ApoI RAATTY 2 cut(s) 446, 500
AseI ATTAAT 1 cut(s) 261
AspS9I GGNCC 3 cut(s) 252, 310, 1004
AsuC2I CCSGG 1 cut(s) 221
AsuHPI GGTGA 1 cut(s) 812
AsuII TTCGAA 1 cut(s) 504
AvaII GGWCC 3 cut(s) 252, 310, 1004
AxyI CCTNAGG 1 cut(s) 492
BaeGI GKGCMC 1 cut(s) 110
BalI TGGCCA 1 cut(s) 137
BarI GAAGNNNNNNTAC 2 cut(s) 933, 965
Bbv12I GWGCWC 2 cut(s) 110, 288
BbvCI CCTCAGC 1 cut(s) 648
BccI CCATC 3 cut(s) 263, 761, 959
BceAI ACGGC 2 cut(s) 376, 660
BcgI CGANNNNNNTGC 2 cut(s) 69, 103
BclI TGATCA 1 cut(s) 604
BcnI CCSGG 1 cut(s) 221
BcoDI GTCTC 2 cut(s) 9, 506
BfaI CTAG 3 cut(s) 54, 834, 953
BisI GCNGC 1 cut(s) 62
BlsI GCNGC 1 cut(s) 63
Bme1390I CCNGG 1 cut(s) 221
Bme18I GGWCC 3 cut(s) 252, 310, 1004
BmgT120I GGNCC 3 cut(s) 252, 310, 1004
BmiI GGNNCC 1 cut(s) 1006
BmrFI CCNGG 1 cut(s) 221
BmsI GCATC 3 cut(s) 66, 195, 910
Bpu10I CCTNAGC 1 cut(s) 648
Bpu14I TTCGAA 1 cut(s) 504
BpuMI CCSGG 1 cut(s) 221
Bsa29I ATCGAT 1 cut(s) 884
BsaWI WCCGGW 1 cut(s) 1070
Bsc4I CCNNNNNNNGG 5 cut(s) 205, 335, 440, 493, 1013
Bse1I ACTGG 2 cut(s) 1098, 1190
Bse21I CCTNAGG 1 cut(s) 492
Bse3DI GCAATG 1 cut(s) 376
BseCI ATCGAT 1 cut(s) 884
BseGI GGATG 2 cut(s) 173, 186
BseLI CCNNNNNNNGG 5 cut(s) 205, 335, 440, 493, 1013
BseMI GCAATG 1 cut(s) 376
BseMII CTCAG 3 cut(s) 20, 218, 639
BseNI ACTGG 2 cut(s) 1098, 1190
BseSI GKGCMC 1 cut(s) 110
BshFI GGCC 1 cut(s) 137
BshVI ATCGAT 1 cut(s) 884
BsiHKAI GWGCWC 2 cut(s) 110, 288
BsiSI CCGG 2 cut(s) 221, 1071
BslI CCNNNNNNNGG 5 cut(s) 205, 335, 440, 493, 1013
BsmAI GTCTC 2 cut(s) 9, 506
BsmBI CGTCTC 1 cut(s) 506
BsmI GAATGC 1 cut(s) 463
BsnI GGCC 1 cut(s) 137
Bsp119I TTCGAA 1 cut(s) 504
Bsp1286I GDGCHC 2 cut(s) 110, 288
Bsp143I GATC 4 cut(s) 516, 604, 684, 910
BspACI CCGC 3 cut(s) 62, 461, 923
BspANI GGCC 1 cut(s) 137
BspCNI CTCAG 3 cut(s) 19, 217, 640
BspDI ATCGAT 1 cut(s) 884
BspHI TCATGA 1 cut(s) 340
BspLI GGNNCC 1 cut(s) 1006
BspPI GGATC 1 cut(s) 905
BspQI GCTCTTC 2 cut(s) 639, 1072
BspT104I TTCGAA 1 cut(s) 504
BsrDI GCAATG 1 cut(s) 376
BsrI ACTGG 2 cut(s) 1098, 1190
BssMI GATC 4 cut(s) 516, 604, 684, 910
Bst4CI ACNGT 4 cut(s) 51, 200, 230, 324
Bst6I CTCTTC 3 cut(s) 639, 832, 1072
BstBI TTCGAA 1 cut(s) 504
BstDEI CTNAG 5 cut(s) 6, 125, 204, 492, 648
BstF5I GGATG 2 cut(s) 173, 186
BstKTI GATC 4 cut(s) 519, 607, 687, 913
BstMAI GTCTC 2 cut(s) 9, 506
BstMBI GATC 4 cut(s) 516, 604, 684, 910
BstMWI GCNNNNNNNGC 2 cut(s) 460, 906
BstSCI CCNGG 1 cut(s) 219
BstSLI GKGCMC 1 cut(s) 110
Bsu15I ATCGAT 1 cut(s) 884
Bsu36I CCTNAGG 1 cut(s) 492
BsuRI GGCC 1 cut(s) 137
BsuTUI ATCGAT 1 cut(s) 884
BtsCI GGATG 2 cut(s) 173, 186
BtsIMutI CAGTG 2 cut(s) 47, 735
CciI TCATGA 1 cut(s) 340
Cfr13I GGNCC 3 cut(s) 252, 310, 1004
ClaI ATCGAT 1 cut(s) 884
Csp6I GTAC 3 cut(s) 733, 950, 1101
CviAII CATG 4 cut(s) 212, 341, 468, 981
CviJI RGCY 7 cut(s) 137, 209, 363, 647, 1067, 1082, 1163
CviKI_1 RGCY 7 cut(s) 137, 209, 363, 647, 1067, 1082, 1163
CviQI GTAC 3 cut(s) 733, 950, 1101
DdeI CTNAG 5 cut(s) 6, 125, 204, 492, 648
DpnI GATC 4 cut(s) 518, 606, 686, 912
DpnII GATC 4 cut(s) 516, 604, 684, 910
EaeI YGGCCR 1 cut(s) 135
Eam1104I CTCTTC 3 cut(s) 639, 832, 1072
EarI CTCTTC 3 cut(s) 639, 832, 1072
Eco47I GGWCC 3 cut(s) 252, 310, 1004
Eco57I CTGAAG 1 cut(s) 576
Eco81I CCTNAGG 1 cut(s) 492
EcoO109I RGGNCCY 1 cut(s) 310
EcoRI GAATTC 1 cut(s) 446
EcoT22I ATGCAT 1 cut(s) 92
Esp3I CGTCTC 1 cut(s) 506
FaeI CATG 4 cut(s) 215, 344, 471, 984
FalI AAGNNNNNCTT 2 cut(s) 1069, 1101
FatI CATG 4 cut(s) 211, 340, 467, 980
FbaI TGATCA 1 cut(s) 604
Fnu4HI GCNGC 1 cut(s) 62
FokI GGATG 2 cut(s) 160, 173
Fsp4HI GCNGC 1 cut(s) 62
FspBI CTAG 3 cut(s) 54, 834, 953
GluI GCNGC 1 cut(s) 62
HaeIII GGCC 1 cut(s) 137
HapII CCGG 2 cut(s) 221, 1071
Hin1II CATG 4 cut(s) 215, 344, 471, 984
HinfI GANTC 4 cut(s) 81, 842, 926, 1024
HpaII CCGG 2 cut(s) 221, 1071
HphI GGTGA 1 cut(s) 812
Hpy166II GTNNAC 3 cut(s) 108, 160, 733
Hpy188I TCNGA 2 cut(s) 75, 601
Hpy188III TCNNGA 3 cut(s) 341, 688, 834
Hpy8I GTNNAC 3 cut(s) 108, 160, 733
HpyAV CCTTC 7 cut(s) 200, 302, 329, 482, 492, 733, 840
HpyCH4III ACNGT 4 cut(s) 51, 200, 230, 324
HpyCH4V TGCA 9 cut(s) 90, 108, 186, 369, 429, 437, 549, 574, 761
HpyF10VI GCNNNNNNNGC 2 cut(s) 460, 906
HpyF3I CTNAG 5 cut(s) 6, 125, 204, 492, 648
Hsp92II CATG 4 cut(s) 215, 344, 471, 984
Ksp22I TGATCA 1 cut(s) 604
Kzo9I GATC 4 cut(s) 516, 604, 684, 910
LguI GCTCTTC 2 cut(s) 639, 1072
LmnI GCTCC 1 cut(s) 524
LweI GCATC 3 cut(s) 66, 195, 910
MaeI CTAG 3 cut(s) 54, 834, 953
MalI GATC 4 cut(s) 518, 606, 686, 912
MboI GATC 4 cut(s) 516, 604, 684, 910
MboII GAAGA 6 cut(s) 395, 569, 626, 849, 1089, 1112
MfeI CAATTG 1 cut(s) 824
MhlI GDGCHC 2 cut(s) 110, 288
MlsI TGGCCA 1 cut(s) 137
MluCI AATT 9 cut(s) 151, 446, 500, 506, 576, 586, 824, 847, 1093
MluNI TGGCCA 1 cut(s) 137
MmeI TCCRAC 1 cut(s) 212
MnlI CCTC 7 cut(s) 155, 187, 301, 643, 648, 1078, 1140
Mox20I TGGCCA 1 cut(s) 137
Mph1103I ATGCAT 1 cut(s) 92
MscI TGGCCA 1 cut(s) 137
MseI TTAA 3 cut(s) 261, 972, 1010
MslI CAYNNNNRTG 1 cut(s) 300
Msp20I TGGCCA 1 cut(s) 137
MspI CCGG 2 cut(s) 221, 1071
MspR9I CCNGG 1 cut(s) 221
MunI CAATTG 1 cut(s) 824
Mva1269I GAATGC 1 cut(s) 463
MwoI GCNNNNNNNGC 2 cut(s) 460, 906
NciI CCSGG 1 cut(s) 221
NdeII GATC 4 cut(s) 516, 604, 684, 910
NlaIII CATG 4 cut(s) 215, 344, 471, 984
NlaIV GGNNCC 1 cut(s) 1006
NsiI ATGCAT 1 cut(s) 92
NspV TTCGAA 1 cut(s) 504
PagI TCATGA 1 cut(s) 340
PciSI GCTCTTC 2 cut(s) 639, 1072
PctI GAATGC 1 cut(s) 463
PfeI GAWTC 4 cut(s) 81, 842, 926, 1024
PfoI TCCNGGA 1 cut(s) 219
PkrI GCNGC 1 cut(s) 63
PpuMI RGGWCCY 1 cut(s) 310
PshBI ATTAAT 1 cut(s) 261
PsiI TTATAA 1 cut(s) 1092
Psp5II RGGWCCY 1 cut(s) 310
PspN4I GGNNCC 1 cut(s) 1006
PspPI GGNCC 3 cut(s) 252, 310, 1004
PspPPI RGGWCCY 1 cut(s) 310
RsaI GTAC 3 cut(s) 734, 951, 1102
RsaNI GTAC 3 cut(s) 733, 950, 1101
RseI CAYNNNNRTG 1 cut(s) 300
SapI GCTCTTC 2 cut(s) 639, 1072
SaqAI TTAA 3 cut(s) 261, 972, 1010
SatI GCNGC 1 cut(s) 62
Sau3AI GATC 4 cut(s) 516, 604, 684, 910
Sau96I GGNCC 3 cut(s) 252, 310, 1004
ScrFI CCNGG 1 cut(s) 221
SduI GDGCHC 2 cut(s) 110, 288
SfaNI GCATC 3 cut(s) 66, 195, 910
SfuI TTCGAA 1 cut(s) 504
SinI GGWCC 3 cut(s) 252, 310, 1004
SmiMI CAYNNNNRTG 1 cut(s) 300
Sse9I AATT 9 cut(s) 151, 446, 500, 506, 576, 586, 824, 847, 1093
SsiI CCGC 3 cut(s) 62, 461, 923
SspI AATATT 1 cut(s) 865
SspMI CTAG 3 cut(s) 54, 834, 953
StyD4I CCNGG 1 cut(s) 219
TaaI ACNGT 4 cut(s) 51, 200, 230, 324
TaqI TCGA 3 cut(s) 42, 504, 884
TasI AATT 9 cut(s) 151, 446, 500, 506, 576, 586, 824, 847, 1093
TatI WGTACW 1 cut(s) 732
TauI GCSGC 1 cut(s) 64
TfiI GAWTC 4 cut(s) 81, 842, 926, 1024
Tru1I TTAA 3 cut(s) 261, 972, 1010
Tru9I TTAA 3 cut(s) 261, 972, 1010
TscAI CASTG 2 cut(s) 54, 735
TspRI CASTG 2 cut(s) 54, 735
VneI GTGCAC 1 cut(s) 106
VpaK11BI GGWCC 3 cut(s) 252, 310, 1004
VspI ATTAAT 1 cut(s) 261
XapI RAATTY 2 cut(s) 446, 500
XbaI TCTAGA 1 cut(s) 833
XcmI CCANNNNNNNNNTGG 2 cut(s) 246, 1035
XspI CTAG 3 cut(s) 54, 834, 953
Zsp2I ATGCAT 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.