FvH4_6g07720

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000046
Physical Location & Seq
Forward (+)
4641913 .. 4643733
1821 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g07720.t1

Sequence Viewer

Length: 1314 bp
ATGCGGTTCAAGTGCGTTTCGAAATGGTGGCACGATCTCATCACCAGTCCCAGGTTCGTAGCCAAGCACCTCTCCATTGCCAAACAAAACGGACCCTCAACTTGTATTCTTTTCAAGCGTTTAGTCTGCAAGGACGCAGAAACCGAAAAGCCTGGTATCATCTTCTCATTCCTCAATTTTACCTATGAAAGTGATAATGACGGTGGTGGTGAGCTTAGCACTAATCTTTCTAGTGTGGAAGACCTTACTATCCTCAACAGGTTAGTCGAATCACTGAGTATTATAGGCCATTGTGATGGGATTGTTTGTTTAGCTTTATTTGATACTAATTCTCCGGCGCCAGCTAAAGCTAGTGAAGTGTGTCTGTGGAATCCTGCAATTCAGGAATTTAAGTTTCTTCCTGAGGAGCCATTCCTTCATGATTGGTCTAAGGTACCCCCCAGCAGTATTGAAGAAAATCCTTACCTGCGTCCAATATGTCACTTTTCCGAATCCATGGGGTTTGGCTATGATGCTAGATCTAAAGATTACAAAGTTATTGACATTGGATTTTCAGGTTCCAAATATTATGGTGATCCAGAATATTATGGTGGACATGTGATTGTGTATCCTCCAAAAGCTGTAGTATACAGCCTCCGATCTGATTCTTGGAGAGAAATCAAGACTTTGTCTTTGGAAAGGGAAACTAGTTACCTTTGGCCTAATATTTTCCAGCTATACTTCAAGGGTATGTTTTATTGGTCGGGATATGAGACACAAAAGGAATTCGTCACTGTCTTTGAGACTCAACAAGATGAGAACGAACGCATTGGGCAAGCGATCATTTCGTTTGATACAAGTGATGAGGTTTTTCATGAAGTTTTGTTACCCTATGAACTACTGGAAGTTAATGGTCCTGTCCCTAGATTGCATCTTACAGTGTGGAATGAGTCTGTTGCTCTTTTCGGCTCGAATCTTGGCTCGATTACTGTGGAATGGCACAAAGCCAAAGCTACAATGTGGGTGATGAATGATTGTGCCAATACTAAAGCTGCTTGGACAAAACACTTGACCTTTGAATATGAAGAGTTCTTTCCTGACCGCTTTCCTCGAAGGGTATTGGCATTTTGGAAGAGCAACGAAATTCTTGGGGTTGGAGAAAATGGAATTCTTGTCTGCTATAACCTCATAACCAAAACGGTCAGGTATCTTCCTATTCAAAGTGTTCCCCATTCTCTTCCATTCATTAGTGGCTATTTTTTTTATCCTTTTTGTGGTACTGATTATGTTCATAGTGTTGTTCCGATCATGAATCATGTAAGGCGTCACATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

438

Amino Acids

50.28

Weight (kDa)

5.64

Isoelectric Point (pI)

43.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 90 - 392 2.1e-19 F-box associated beta propeller domain
FBA_3 PF08268 111 - 421 4.1e-09 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 474
Acc65I GGTACC 1 cut(s) 433
AccB1I GGYRCC 2 cut(s) 337, 433
AccI GTMKAC 1 cut(s) 627
AciI CCGC 2 cut(s) 4, 1081
AclWI GGATC 1 cut(s) 569
AcsI RAATTY 4 cut(s) 386, 764, 1122, 1146
AcyI GRCGYC 2 cut(s) 338, 1303
AfaI GTAC 2 cut(s) 435, 1258
AfiI CCNNNNNNNGG 2 cut(s) 51, 1253
AflIII ACRYGT 1 cut(s) 595
AgsI TTSAA 6 cut(s) 10, 115, 452, 724, 1058, 1199
AhlI ACTAGT 1 cut(s) 686
AjnI CCWGG 2 cut(s) 50, 151
AluBI AGCT 8 cut(s) 214, 314, 344, 350, 620, 715, 992, 1031
AluI AGCT 8 cut(s) 214, 314, 344, 350, 620, 715, 992, 1031
Alw26I GTCTC 2 cut(s) 746, 776
AlwI GGATC 1 cut(s) 569
AoxI GGCC 2 cut(s) 286, 698
ApeKI GCWGC 1 cut(s) 1031
ApoI RAATTY 4 cut(s) 386, 764, 1122, 1146
ArsI GACNNNNNNTTYG 2 cut(s) 655, 687
Asp718I GGTACC 1 cut(s) 433
AspLEI GCGC 1 cut(s) 340
AspS9I GGNCC 2 cut(s) 92, 893
AsuHPI GGTGA 4 cut(s) 34, 221, 584, 1015
AsuII TTCGAA 1 cut(s) 20
AvaII GGWCC 2 cut(s) 92, 893
AxyI CCTNAGG 1 cut(s) 402
BanI GGYRCC 2 cut(s) 337, 433
BarI GAAGNNNNNNTAC 2 cut(s) 849, 881
BbsI GAAGAC 1 cut(s) 246
BbvI GCAGC 1 cut(s) 1018
BccI CCATC 1 cut(s) 290
BciT130I CCWGG 2 cut(s) 52, 153
BciVI GTATCC 1 cut(s) 618
BcoDI GTCTC 2 cut(s) 746, 776
BcuI ACTAGT 1 cut(s) 686
BfaI CTAG 5 cut(s) 231, 351, 516, 687, 903
BfmI CTRYAG 1 cut(s) 621
BfoI RGCGCY 1 cut(s) 341
BfuAI ACCTGC 1 cut(s) 474
BfuI GTATCC 1 cut(s) 618
BglII AGATCT 1 cut(s) 518
BisI GCNGC 1 cut(s) 1032
BlpI GCTNAGC 1 cut(s) 215
BlsI GCNGC 1 cut(s) 1033
Bme1390I CCNGG 2 cut(s) 52, 153
Bme18I GGWCC 2 cut(s) 92, 893
BmgT120I GGNCC 2 cut(s) 92, 893
BmiI GGNNCC 5 cut(s) 94, 339, 408, 435, 559
BmrFI CCNGG 2 cut(s) 52, 153
BmsI GCATC 2 cut(s) 502, 919
BpiI GAAGAC 1 cut(s) 246
Bpu1102I GCTNAGC 1 cut(s) 215
Bpu14I TTCGAA 1 cut(s) 20
BsaHI GRCGYC 2 cut(s) 338, 1303
BsaJI CCNNGG 2 cut(s) 50, 495
BsaXI ACNNNNNCTCC 2 cut(s) 316, 346
Bsc4I CCNNNNNNNGG 2 cut(s) 51, 1253
Bse1I ACTGG 2 cut(s) 45, 885
Bse21I CCTNAGG 1 cut(s) 402
Bse3DI GCAATG 1 cut(s) 75
BseBI CCWGG 2 cut(s) 52, 153
BseDI CCNNGG 2 cut(s) 50, 495
BseLI CCNNNNNNNGG 2 cut(s) 51, 1253
BseMI GCAATG 1 cut(s) 75
BseMII CTCAG 2 cut(s) 266, 393
BseNI ACTGG 2 cut(s) 45, 885
BseRI GAGGAG 1 cut(s) 419
BseXI GCAGC 1 cut(s) 1018
BseYI CCCAGC 1 cut(s) 440
BshFI GGCC 2 cut(s) 288, 700
BshNI GGYRCC 2 cut(s) 337, 433
BsiSI CCGG 1 cut(s) 335
BslFI GGGAC 2 cut(s) 33, 884
BslI CCNNNNNNNGG 2 cut(s) 51, 1253
BsmAI GTCTC 2 cut(s) 746, 776
BsmFI GGGAC 2 cut(s) 33, 884
BsnI GGCC 2 cut(s) 288, 700
Bsp119I TTCGAA 1 cut(s) 20
Bsp143I GATC 6 cut(s) 34, 518, 574, 638, 819, 1284
Bsp1720I GCTNAGC 1 cut(s) 215
Bsp19I CCATGG 1 cut(s) 495
BspACI CCGC 2 cut(s) 4, 1081
BspANI GGCC 2 cut(s) 288, 700
BspCNI CTCAG 2 cut(s) 267, 394
BspHI TCATGA 3 cut(s) 418, 853, 1287
BspLI GGNNCC 5 cut(s) 94, 339, 408, 435, 559
BspMI ACCTGC 1 cut(s) 474
BspPI GGATC 1 cut(s) 569
BspQI GCTCTTC 1 cut(s) 1106
BspT104I TTCGAA 1 cut(s) 20
BspT107I GGYRCC 2 cut(s) 337, 433
BsrDI GCAATG 1 cut(s) 75
BsrI ACTGG 2 cut(s) 45, 885
BssECI CCNNGG 2 cut(s) 50, 495
BssMI GATC 6 cut(s) 34, 518, 574, 638, 819, 1284
BssNAI GTATAC 1 cut(s) 628
BssNI GRCGYC 2 cut(s) 338, 1303
BssT1I CCWWGG 1 cut(s) 495
Bst1107I GTATAC 1 cut(s) 628
Bst2UI CCWGG 2 cut(s) 52, 153
Bst4CI ACNGT 5 cut(s) 203, 775, 919, 970, 1180
Bst6I CTCTTC 3 cut(s) 1059, 1106, 1221
BstACI GRCGYC 2 cut(s) 338, 1303
BstBI TTCGAA 1 cut(s) 20
BstC8I GCNNGC 2 cut(s) 342, 816
BstDEI CTNAG 4 cut(s) 215, 275, 402, 429
BstDSI CCRYGG 1 cut(s) 495
BstH2I RGCGCY 1 cut(s) 341
BstHHI GCGC 1 cut(s) 340
BstKTI GATC 6 cut(s) 37, 521, 577, 641, 822, 1287
BstMAI GTCTC 2 cut(s) 746, 776
BstMBI GATC 6 cut(s) 34, 518, 574, 638, 819, 1284
BstNI CCWGG 2 cut(s) 52, 153
BstNSI RCATGY 1 cut(s) 599
BstSCI CCNGG 2 cut(s) 50, 151
BstSFI CTRYAG 1 cut(s) 621
BstV1I GCAGC 1 cut(s) 1018
BstV2I GAAGAC 1 cut(s) 246
BstX2I RGATCY 1 cut(s) 518
BstXI CCANNNNNNTGG 1 cut(s) 296
BstYI RGATCY 1 cut(s) 518
BstZ17I GTATAC 1 cut(s) 628
Bsu36I CCTNAGG 1 cut(s) 402
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 2 cut(s) 288, 700
BtgI CCRYGG 1 cut(s) 495
BtsIMutI CAGTG 3 cut(s) 272, 771, 924
BveI ACCTGC 1 cut(s) 474
Cac8I GCNNGC 2 cut(s) 342, 816
CciI TCATGA 3 cut(s) 418, 853, 1287
CfoI GCGC 1 cut(s) 340
Cfr13I GGNCC 2 cut(s) 92, 893
CseI GACGC 3 cut(s) 143, 458, 1292
Csp6I GTAC 2 cut(s) 434, 1257
CviAII CATG 6 cut(s) 419, 496, 596, 854, 1288, 1295
CviQI GTAC 2 cut(s) 434, 1257
DdeI CTNAG 4 cut(s) 215, 275, 402, 429
DinI GGCGCC 1 cut(s) 339
DpnI GATC 6 cut(s) 36, 520, 576, 640, 821, 1286
DpnII GATC 6 cut(s) 34, 518, 574, 638, 819, 1284
Eam1104I CTCTTC 3 cut(s) 1059, 1106, 1221
EarI CTCTTC 3 cut(s) 1059, 1106, 1221
Eco130I CCWWGG 1 cut(s) 495
Eco47I GGWCC 2 cut(s) 92, 893
Eco81I CCTNAGG 1 cut(s) 402
EcoRI GAATTC 2 cut(s) 764, 1146
EcoRII CCWGG 2 cut(s) 50, 151
EcoT14I CCWWGG 1 cut(s) 495
EgeI GGCGCC 1 cut(s) 339
EheI GGCGCC 1 cut(s) 339
ErhI CCWWGG 1 cut(s) 495
FaeI CATG 6 cut(s) 422, 499, 599, 857, 1291, 1298
FaqI GGGAC 2 cut(s) 33, 884
FatI CATG 6 cut(s) 418, 495, 595, 853, 1287, 1294
FblI GTMKAC 1 cut(s) 627
Fnu4HI GCNGC 1 cut(s) 1032
Fsp4HI GCNGC 1 cut(s) 1032
FspBI CTAG 5 cut(s) 231, 351, 516, 687, 903
GlaI GCGC 1 cut(s) 339
GluI GCNGC 1 cut(s) 1032
GsaI CCCAGC 1 cut(s) 444
HaeII RGCGCY 1 cut(s) 341
HaeIII GGCC 2 cut(s) 288, 700
HapII CCGG 1 cut(s) 335
HgaI GACGC 3 cut(s) 143, 458, 1292
HhaI GCGC 1 cut(s) 340
Hin1I GRCGYC 2 cut(s) 338, 1303
Hin1II CATG 6 cut(s) 422, 499, 599, 857, 1291, 1298
Hin6I GCGC 1 cut(s) 338
HinP1I GCGC 1 cut(s) 338
HinfI GANTC 8 cut(s) 269, 370, 491, 644, 784, 929, 952, 1291
HpaII CCGG 1 cut(s) 335
HphI GGTGA 4 cut(s) 34, 221, 584, 1015
Hpy166II GTNNAC 2 cut(s) 593, 628
Hpy188I TCNGA 4 cut(s) 490, 638, 643, 1284
Hpy188III TCNNGA 9 cut(s) 383, 401, 419, 578, 661, 744, 854, 1076, 1288
Hpy8I GTNNAC 2 cut(s) 593, 628
HpyAV CCTTC 2 cut(s) 425, 1086
HpyCH4III ACNGT 5 cut(s) 203, 775, 919, 970, 1180
HpyCH4V TGCA 3 cut(s) 129, 377, 910
HpyF3I CTNAG 4 cut(s) 215, 275, 402, 429
Hsp92I GRCGYC 2 cut(s) 338, 1303
Hsp92II CATG 6 cut(s) 422, 499, 599, 857, 1291, 1298
HspAI GCGC 1 cut(s) 338
KasI GGCGCC 1 cut(s) 337
KpnI GGTACC 1 cut(s) 437
Kzo9I GATC 6 cut(s) 34, 518, 574, 638, 819, 1284
LguI GCTCTTC 1 cut(s) 1106
LmnI GCTCC 1 cut(s) 406
Lsp1109I GCAGC 1 cut(s) 1018
LweI GCATC 2 cut(s) 502, 919
MaeI CTAG 5 cut(s) 231, 351, 516, 687, 903
MaeIII GTNAC 5 cut(s) 479, 689, 769, 864, 1304
MalI GATC 6 cut(s) 36, 520, 576, 640, 821, 1286
MboI GATC 6 cut(s) 34, 518, 574, 638, 819, 1284
MboII GAAGA 8 cut(s) 154, 251, 389, 464, 1076, 1123, 1181, 1208
MflI RGATCY 1 cut(s) 518
MluCI AATT 7 cut(s) 175, 328, 378, 386, 764, 1122, 1146
Mly113I GGCGCC 1 cut(s) 338
MlyI GAGTC 2 cut(s) 778, 938
MmeI TCCRAC 1 cut(s) 1114
MseI TTAA 2 cut(s) 390, 888
MslI CAYNNNNRTG 1 cut(s) 294
MspI CCGG 1 cut(s) 335
MspR9I CCNGG 2 cut(s) 52, 153
MvaI CCWGG 2 cut(s) 52, 153
NarI GGCGCC 1 cut(s) 338
NcoI CCATGG 1 cut(s) 495
NdeII GATC 6 cut(s) 34, 518, 574, 638, 819, 1284
NlaIII CATG 6 cut(s) 422, 499, 599, 857, 1291, 1298
NlaIV GGNNCC 5 cut(s) 94, 339, 408, 435, 559
NmuCI GTSAC 3 cut(s) 479, 769, 1304
NspI RCATGY 1 cut(s) 599
NspV TTCGAA 1 cut(s) 20
PagI TCATGA 3 cut(s) 418, 853, 1287
PciI ACATGT 1 cut(s) 595
PciSI GCTCTTC 1 cut(s) 1106
PcsI WCGNNNNNNNCGW 1 cut(s) 141
PfeI GAWTC 6 cut(s) 269, 370, 491, 644, 952, 1291
PflFI GACNNNGTC 1 cut(s) 667
PkrI GCNGC 1 cut(s) 1033
PleI GAGTC 2 cut(s) 778, 937
PluTI GGCGCC 1 cut(s) 341
PpsI GAGTC 2 cut(s) 778, 937
PscI ACATGT 1 cut(s) 595
Psp6I CCWGG 2 cut(s) 50, 151
PspFI CCCAGC 1 cut(s) 440
PspGI CCWGG 2 cut(s) 50, 151
PspN4I GGNNCC 5 cut(s) 94, 339, 408, 435, 559
PspPI GGNCC 2 cut(s) 92, 893
PsuI RGATCY 1 cut(s) 518
PsyI GACNNNGTC 1 cut(s) 667
RsaI GTAC 2 cut(s) 435, 1258
RsaNI GTAC 2 cut(s) 434, 1257
RseI CAYNNNNRTG 1 cut(s) 294
SapI GCTCTTC 1 cut(s) 1106
SaqAI TTAA 2 cut(s) 390, 888
SatI GCNGC 1 cut(s) 1032
Sau3AI GATC 6 cut(s) 34, 518, 574, 638, 819, 1284
Sau96I GGNCC 2 cut(s) 92, 893
SchI GAGTC 2 cut(s) 778, 938
ScrFI CCNGG 2 cut(s) 52, 153
SfaNI GCATC 2 cut(s) 502, 919
SfcI CTRYAG 1 cut(s) 621
SfoI GGCGCC 1 cut(s) 339
SfuI TTCGAA 1 cut(s) 20
SinI GGWCC 2 cut(s) 92, 893
SmiMI CAYNNNNRTG 1 cut(s) 294
SpeI ACTAGT 1 cut(s) 686
Sse9I AATT 7 cut(s) 175, 328, 378, 386, 764, 1122, 1146
SsiI CCGC 2 cut(s) 4, 1081
SspDI GGCGCC 1 cut(s) 337
SspI AATATT 3 cut(s) 566, 584, 706
SspMI CTAG 5 cut(s) 231, 351, 516, 687, 903
StyD4I CCNGG 2 cut(s) 50, 151
StyI CCWWGG 1 cut(s) 495
TaaI ACNGT 5 cut(s) 203, 775, 919, 970, 1180
TaqI TCGA 5 cut(s) 20, 267, 950, 962, 1090
TasI AATT 7 cut(s) 175, 328, 378, 386, 764, 1122, 1146
TfiI GAWTC 6 cut(s) 269, 370, 491, 644, 952, 1291
Tru1I TTAA 2 cut(s) 390, 888
Tru9I TTAA 2 cut(s) 390, 888
TscAI CASTG 3 cut(s) 279, 778, 924
TseFI GTSAC 3 cut(s) 479, 769, 1304
TseI GCWGC 1 cut(s) 1031
Tsp45I GTSAC 3 cut(s) 479, 769, 1304
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 3 cut(s) 279, 778, 924
Tth111I GACNNNGTC 1 cut(s) 667
VpaK11BI GGWCC 2 cut(s) 92, 893
XapI RAATTY 4 cut(s) 386, 764, 1122, 1146
XceI RCATGY 1 cut(s) 599
XmiI GTMKAC 1 cut(s) 627
XspI CTAG 5 cut(s) 231, 351, 516, 687, 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.