Rorug03G0012500

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
986661 .. 989190
2530 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0012500.1

Sequence Viewer

Length: 1638 bp
ATGGGTATAGGCACCTGTGGCCTTTATGTCCCTTTTGGAAAGAAAAAGAACATTGTAGGTCATGAGCATTTGAGCCCCAATCCTCAGAAATATGTTTCTGATAGTTTTGAGTCTTCTCCTTCTCATTCAAATACTAATATGTTGTGTTCTAAATCCCCAAGTGACAGAAATTTGGTCACTGAGAAGGAGTTTTGTCATCGAAGAAGTTCTTCAGTAGGTAACATACATAAACCCCCTCGAAATATTTTGACCTCGGGGAGGTCATCTGATGCAAGTCAAGCTGTAAAGCGGGCAAGTCAAGCTGACAGAGATTTGGTCACCGAGAAGAAGTTTCATCACCAAAGAAGTTTTTCACAAGGTAACTGTTATGAAACCCCTCAAAATAATTTAGTCCCGAGAAGGGTATCTGATGCAAATCAAGCTGCGAAGCAGTGTTTAAGTCCTACCAGATGTCAGTATTACGGCCATGGAAATATCATAAAGGGGTTAAATAGCGTAACAAAACCCCAAAACCCTGAAAGTGTGGAAGAGATCAACAATTTGGGCAACATGAAATATAGAAATGGGTACTTTAAGGAGGCAATACCCTTATATGATAAGGCCATTGCCTTGTGCCCTCAAAATGCTGCTTTCCATTCCAATAAGGCTGCAGCATTGATCAGCCTTGGTAGATTAACTGAAGCTGTGGAAGAGTGCCTAAAGGCAATCAAATGTGAACCATCGTGTTCTCGTGCCCATTATAGGCTTGGAACTCTTTATACTAGGTTTGGTCAAGTTGATGATGCAAGTTGGCATTTCGAGTTATCTGGGAAGAATATTGGCTCAGAAATTAGACAGCGTCTATTACGTATTGAAGCTCACTACGTAAATACTAACAAGGCCAGGAAGGTTAAAGATTGGGATGGGGTTTTGAGAGAAAGCACTTTATGTATTGAAGCTGGAGTAGATGCATCAAACCAGTTGGTTGCTTTAAAAGCTGAGGCTCTATTTAAGCTTGGAAGGGTAGATGAAGCTTTTGAATTAGTAAATGCTGAAAGTCATTCAGAAGAAAGTAGAGTCACAAAACCTTGCAAGGGGACAGCATGCTTGCTGATAATTGAAACTAAACTCAATTTGTATCTTGGAAGGTTTGAGAAAGGAGTTAAGTCTGCAGAAAGAGCTGTGGACATGGATTCAACCCGGAAGTCTTTAAAGTGGCTGAAGAAAGCTAGGGGTGCCGCAGATGGTAGGAAATGTGGAAATTCTTTCTACAAGGATCAAAAATACTTGGAGGCATGCACAATGTTTGGCCATGGTCTGCAGTATGTTCCTACAAACAATGTCTTACTTTGTGATCGAGCCGCTTGCAGGTCTAAGCTTGGACAGTGGGAAATGGCCATTGAAGATTGCAATGCAGCTCTAAGAGAACGGCCTAATTTCCACAAAGCTCTTCTATGGCGTGCTCACTCTTATGCTAGACTTAGAAGATGGGAGGATTCTTTAAAGGACTATTCTGCATTGAGCAAGGAGTTTCCTGGAGATGAATTTATTGCCAGTTCTCTTGATCAAGTACAAATGGAATTGAAGGCTCAAACTGGTAGATTCTCAAGCCTTGAGCCAATAGTGGAAACAAATGGAATTGAAGGCTCAAGCTGGTAG

Protein Analysis

545

Amino Acids

61.09

Weight (kDa)

9.07

Isoelectric Point (pI)

49.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_12 PF13424 179 - 237 6.6e-06 Tetratricopeptide repeat
TPR_16 PF13432 181 - 238 7.5e-06 Tetratricopeptide repeat
TPR_11 PF13414 182 - 219 2e-06 TPR repeat
TPR_19 PF14559 189 - 246 5e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1338
AccB1I GGYRCC 2 cut(s) 11, 1214
AciI CCGC 3 cut(s) 289, 1218, 1341
AclWI GGATC 1 cut(s) 1263
AcoI YGGCCR 3 cut(s) 463, 1288, 1374
AcsI RAATTY 3 cut(s) 169, 1240, 1523
AcuI CTGAAG 3 cut(s) 195, 699, 1220
AfaI GTAC 2 cut(s) 569, 1551
AfiI CCNNNNNNNGG 5 cut(s) 258, 400, 741, 1073, 1347
AgsI TTSAA 9 cut(s) 129, 854, 935, 1019, 1100, 1176, 1382, 1564, 1622
AjnI CCWGG 2 cut(s) 881, 1513
Alw21I GWGCWC 1 cut(s) 1444
AlwI GGATC 1 cut(s) 1263
Ama87I CYCGRG 2 cut(s) 253, 394
AoxI GGCC 7 cut(s) 19, 463, 600, 879, 1288, 1374, 1409
ApeKI GCWGC 5 cut(s) 422, 626, 647, 650, 1394
ApoI RAATTY 3 cut(s) 169, 1240, 1523
Asp700I GAANNNNTTC 3 cut(s) 205, 208, 349
AsuC2I CCSGG 1 cut(s) 1180
AsuHPI GGTGA 2 cut(s) 310, 329
AvaI CYCGRG 2 cut(s) 253, 394
BaeGI GKGCMC 2 cut(s) 617, 736
BalI TGGCCA 2 cut(s) 1290, 1376
BanI GGYRCC 2 cut(s) 11, 1214
BanII GRGCYC 1 cut(s) 77
BauI CACGAG 1 cut(s) 729
BbsI GAAGAC 1 cut(s) 105
Bbv12I GWGCWC 1 cut(s) 1444
BbvCI CCTCAGC 1 cut(s) 978
BbvI GCAGC 5 cut(s) 409, 613, 634, 662, 1406
BccI CCATC 4 cut(s) 727, 896, 1217, 1461
BceAI ACGGC 2 cut(s) 478, 1424
BcgI CGANNNNNNTGC 2 cut(s) 1326, 1360
BciT130I CCWGG 2 cut(s) 883, 1515
BclI TGATCA 2 cut(s) 657, 1543
BcnI CCSGG 1 cut(s) 1180
BfaI CTAG 3 cut(s) 762, 1209, 1455
BfmI CTRYAG 3 cut(s) 648, 1149, 1298
BfuAI ACCTGC 1 cut(s) 1338
BisI GCNGC 7 cut(s) 423, 627, 648, 651, 1218, 1341, 1395
BlsI GCNGC 7 cut(s) 424, 628, 649, 652, 1219, 1342, 1396
Bme1390I CCNGG 3 cut(s) 883, 1180, 1515
BmeT110I CYCGRG 2 cut(s) 253, 394
BmiI GGNNCC 2 cut(s) 13, 1216
BmrFI CCNGG 3 cut(s) 883, 1180, 1515
BmsI GCATC 5 cut(s) 259, 400, 772, 937, 959
BpiI GAAGAC 1 cut(s) 105
BpmI CTGGAG 2 cut(s) 960, 1536
Bpu10I CCTNAGC 1 cut(s) 978
BpuEI CTTGAG 3 cut(s) 1570, 1612, 1613
BpuMI CCSGG 1 cut(s) 1180
BsaAI YACGTR 2 cut(s) 848, 865
BsaBI GATNNNNATC 1 cut(s) 414
BsaJI CCNNGG 4 cut(s) 252, 466, 664, 1291
Bsc4I CCNNNNNNNGG 5 cut(s) 258, 400, 741, 1073, 1347
Bse1I ACTGG 3 cut(s) 958, 1533, 1579
Bse3DI GCAATG 2 cut(s) 603, 1396
Bse8I GATNNNNATC 1 cut(s) 414
BseBI CCWGG 2 cut(s) 883, 1515
BseDI CCNNGG 4 cut(s) 252, 466, 664, 1291
BseGI GGATG 1 cut(s) 907
BseJI GATNNNNATC 1 cut(s) 414
BseLI CCNNNNNNNGG 5 cut(s) 258, 400, 741, 1073, 1347
BseMI GCAATG 2 cut(s) 603, 1396
BseMII CTCAG 4 cut(s) 98, 171, 837, 969
BseNI ACTGG 3 cut(s) 958, 1533, 1579
BseSI GKGCMC 2 cut(s) 617, 736
BseXI GCAGC 5 cut(s) 409, 613, 634, 662, 1406
BshFI GGCC 7 cut(s) 21, 465, 602, 881, 1290, 1376, 1411
BshNI GGYRCC 2 cut(s) 11, 1214
BsiHKAI GWGCWC 1 cut(s) 1444
BsiHKCI CYCGRG 2 cut(s) 253, 394
BsiSI CCGG 1 cut(s) 1180
BslFI GGGAC 3 cut(s) 14, 377, 1090
BslI CCNNNNNNNGG 5 cut(s) 258, 400, 741, 1073, 1347
BsmFI GGGAC 3 cut(s) 14, 377, 1090
BsnI GGCC 7 cut(s) 21, 465, 602, 881, 1290, 1376, 1411
BsoBI CYCGRG 2 cut(s) 253, 394
Bsp1286I GDGCHC 4 cut(s) 77, 617, 736, 1444
Bsp143I GATC 5 cut(s) 531, 657, 1255, 1333, 1543
Bsp19I CCATGG 2 cut(s) 466, 1291
BspACI CCGC 3 cut(s) 289, 1218, 1341
BspANI GGCC 7 cut(s) 21, 465, 602, 881, 1290, 1376, 1411
BspCNI CTCAG 4 cut(s) 97, 172, 836, 970
BspHI TCATGA 1 cut(s) 61
BspLI GGNNCC 2 cut(s) 13, 1216
BspMAI CTGCAG 3 cut(s) 652, 1153, 1302
BspMI ACCTGC 1 cut(s) 1338
BspPI GGATC 1 cut(s) 1263
BspQI GCTCTTC 1 cut(s) 1434
BspT107I GGYRCC 2 cut(s) 11, 1214
BsrDI GCAATG 2 cut(s) 603, 1396
BsrI ACTGG 3 cut(s) 958, 1533, 1579
BssECI CCNNGG 4 cut(s) 252, 466, 664, 1291
BssMI GATC 5 cut(s) 531, 657, 1255, 1333, 1543
BssSI CACGAG 1 cut(s) 729
BssT1I CCWWGG 3 cut(s) 466, 664, 1291
Bst2BI CACGAG 1 cut(s) 729
Bst2UI CCWGG 2 cut(s) 883, 1515
Bst4CI ACNGT 2 cut(s) 365, 1365
Bst6I CTCTTC 3 cut(s) 522, 684, 1434
BstBAI YACGTR 2 cut(s) 848, 865
BstC8I GCNNGC 6 cut(s) 291, 1084, 1088, 1276, 1345, 1440
BstDEI CTNAG 7 cut(s) 84, 180, 823, 978, 1353, 1400, 1460
BstDSI CCRYGG 2 cut(s) 466, 1291
BstEII GGTNACC 1 cut(s) 316
BstENI CCTNNNNNAGG 1 cut(s) 256
BstF5I GGATG 1 cut(s) 907
BstKTI GATC 5 cut(s) 534, 660, 1258, 1336, 1546
BstMBI GATC 5 cut(s) 531, 657, 1255, 1333, 1543
BstMWI GCNNNNNNNGC 7 cut(s) 18, 278, 299, 419, 974, 1157, 1214
BstNI CCWGG 2 cut(s) 883, 1515
BstNSI RCATGY 2 cut(s) 1086, 1278
BstPI GGTNACC 1 cut(s) 316
BstSCI CCNGG 3 cut(s) 881, 1178, 1513
BstSFI CTRYAG 3 cut(s) 648, 1149, 1298
BstSLI GKGCMC 2 cut(s) 617, 736
BstSNI TACGTA 2 cut(s) 848, 865
BstV1I GCAGC 5 cut(s) 409, 613, 634, 662, 1406
BstV2I GAAGAC 1 cut(s) 105
BsuRI GGCC 7 cut(s) 21, 465, 602, 881, 1290, 1376, 1411
BtgI CCRYGG 2 cut(s) 466, 1291
BtsCI GGATG 1 cut(s) 907
BtsI GCAGTG 1 cut(s) 437
BtsIMutI CAGTG 3 cut(s) 177, 437, 1370
BveI ACCTGC 1 cut(s) 1338
Cac8I GCNNGC 6 cut(s) 291, 1084, 1088, 1276, 1345, 1440
CciI TCATGA 1 cut(s) 61
CseI GACGC 1 cut(s) 827
Csp6I GTAC 2 cut(s) 568, 1550
CviAII CATG 7 cut(s) 62, 467, 550, 1083, 1168, 1275, 1292
CviQI GTAC 2 cut(s) 568, 1550
DdeI CTNAG 7 cut(s) 84, 180, 823, 978, 1353, 1400, 1460
DpnI GATC 5 cut(s) 533, 659, 1257, 1335, 1545
DpnII GATC 5 cut(s) 531, 657, 1255, 1333, 1543
DraI TTTAAA 3 cut(s) 972, 1191, 1482
EaeI YGGCCR 3 cut(s) 463, 1288, 1374
Eam1104I CTCTTC 3 cut(s) 522, 684, 1434
EarI CTCTTC 3 cut(s) 522, 684, 1434
Eco105I TACGTA 2 cut(s) 848, 865
Eco130I CCWWGG 3 cut(s) 466, 664, 1291
Eco24I GRGCYC 1 cut(s) 77
Eco57I CTGAAG 3 cut(s) 195, 699, 1220
Eco88I CYCGRG 2 cut(s) 253, 394
Eco91I GGTNACC 1 cut(s) 316
EcoNI CCTNNNNNAGG 1 cut(s) 256
EcoO65I GGTNACC 1 cut(s) 316
EcoRII CCWGG 2 cut(s) 881, 1513
EcoT14I CCWWGG 3 cut(s) 466, 664, 1291
EcoT22I ATGCAT 1 cut(s) 952
EcoT38I GRGCYC 1 cut(s) 77
ErhI CCWWGG 3 cut(s) 466, 664, 1291
FaeI CATG 7 cut(s) 65, 470, 553, 1086, 1171, 1278, 1295
FalI AAGNNNNNCTT 2 cut(s) 193, 225
FaqI GGGAC 3 cut(s) 14, 377, 1090
FatI CATG 7 cut(s) 61, 466, 549, 1082, 1167, 1274, 1291
FauI CCCGC 1 cut(s) 282
FbaI TGATCA 2 cut(s) 657, 1543
Fnu4HI GCNGC 7 cut(s) 423, 627, 648, 651, 1218, 1341, 1395
FokI GGATG 1 cut(s) 914
FriOI GRGCYC 1 cut(s) 77
Fsp4HI GCNGC 7 cut(s) 423, 627, 648, 651, 1218, 1341, 1395
FspBI CTAG 3 cut(s) 762, 1209, 1455
GluI GCNGC 7 cut(s) 423, 627, 648, 651, 1218, 1341, 1395
GsuI CTGGAG 2 cut(s) 960, 1536
HaeIII GGCC 7 cut(s) 21, 465, 602, 881, 1290, 1376, 1411
HapII CCGG 1 cut(s) 1180
HgaI GACGC 1 cut(s) 827
Hin1II CATG 7 cut(s) 65, 470, 553, 1086, 1171, 1278, 1295
HindIII AAGCTT 3 cut(s) 992, 1011, 1355
HinfI GANTC 5 cut(s) 110, 1056, 1172, 1475, 1581
HpaII CCGG 1 cut(s) 1180
HphI GGTGA 2 cut(s) 310, 329
Hpy166II GTNNAC 2 cut(s) 716, 1165
Hpy188I TCNGA 6 cut(s) 87, 100, 268, 409, 826, 1045
Hpy188III TCNNGA 3 cut(s) 62, 394, 1541
Hpy8I GTNNAC 2 cut(s) 716, 1165
HpyAV CCTTC 8 cut(s) 129, 178, 393, 880, 993, 1119, 1558, 1616
HpyCH4III ACNGT 2 cut(s) 365, 1365
HpyCH4IV ACGT 2 cut(s) 847, 864
HpyF10VI GCNNNNNNNGC 7 cut(s) 18, 278, 299, 419, 974, 1157, 1214
HpyF3I CTNAG 7 cut(s) 84, 180, 823, 978, 1353, 1400, 1460
HpySE526I ACGT 2 cut(s) 847, 864
Hsp92II CATG 7 cut(s) 65, 470, 553, 1086, 1171, 1278, 1295
Ksp22I TGATCA 2 cut(s) 657, 1543
Kzo9I GATC 5 cut(s) 531, 657, 1255, 1333, 1543
LguI GCTCTTC 1 cut(s) 1434
Lsp1109I GCAGC 5 cut(s) 409, 613, 634, 662, 1406
LweI GCATC 5 cut(s) 259, 400, 772, 937, 959
MaeI CTAG 3 cut(s) 762, 1209, 1455
MaeII ACGT 2 cut(s) 847, 864
MaeIII GTNAC 7 cut(s) 161, 175, 218, 316, 359, 496, 1057
MalI GATC 5 cut(s) 533, 659, 1257, 1335, 1545
MboI GATC 5 cut(s) 531, 657, 1255, 1333, 1543
MhlI GDGCHC 4 cut(s) 77, 617, 736, 1444
MlsI TGGCCA 2 cut(s) 1290, 1376
MluNI TGGCCA 2 cut(s) 1290, 1376
MlyI GAGTC 2 cut(s) 119, 1065
Mox20I TGGCCA 2 cut(s) 1290, 1376
Mph1103I ATGCAT 1 cut(s) 952
MroXI GAANNNNTTC 3 cut(s) 205, 208, 349
MscI TGGCCA 2 cut(s) 1290, 1376
MslI CAYNNNNRTG 1 cut(s) 1449
Msp20I TGGCCA 2 cut(s) 1290, 1376
MspI CCGG 1 cut(s) 1180
MspR9I CCNGG 3 cut(s) 883, 1180, 1515
MvaI CCWGG 2 cut(s) 883, 1515
MwoI GCNNNNNNNGC 7 cut(s) 18, 278, 299, 419, 974, 1157, 1214
NciI CCSGG 1 cut(s) 1180
NcoI CCATGG 2 cut(s) 466, 1291
NdeII GATC 5 cut(s) 531, 657, 1255, 1333, 1543
NlaIII CATG 7 cut(s) 65, 470, 553, 1086, 1171, 1278, 1295
NlaIV GGNNCC 2 cut(s) 13, 1216
NmuCI GTSAC 4 cut(s) 161, 175, 316, 1057
NsiI ATGCAT 1 cut(s) 952
NspI RCATGY 2 cut(s) 1086, 1278
PaeI GCATGC 2 cut(s) 1086, 1278
PagI TCATGA 1 cut(s) 61
PciSI GCTCTTC 1 cut(s) 1434
PdmI GAANNNNTTC 3 cut(s) 205, 208, 349
PfeI GAWTC 3 cut(s) 1172, 1475, 1581
PflFI GACNNNGTC 1 cut(s) 837
PfoI TCCNGGA 1 cut(s) 1513
PkrI GCNGC 7 cut(s) 424, 628, 649, 652, 1219, 1342, 1396
PleI GAGTC 2 cut(s) 118, 1064
PpsI GAGTC 2 cut(s) 118, 1064
Ppu21I YACGTR 2 cut(s) 848, 865
Psp6I CCWGG 2 cut(s) 881, 1513
PspEI GGTNACC 1 cut(s) 316
PspGI CCWGG 2 cut(s) 881, 1513
PspN4I GGNNCC 2 cut(s) 13, 1216
PsrI GAACNNNNNNTAC 2 cut(s) 742, 774
PstI CTGCAG 3 cut(s) 652, 1153, 1302
PsyI GACNNNGTC 1 cut(s) 837
RsaI GTAC 2 cut(s) 569, 1551
RsaNI GTAC 2 cut(s) 568, 1550
RseI CAYNNNNRTG 1 cut(s) 1449
SapI GCTCTTC 1 cut(s) 1434
SatI GCNGC 7 cut(s) 423, 627, 648, 651, 1218, 1341, 1395
Sau3AI GATC 5 cut(s) 531, 657, 1255, 1333, 1543
SchI GAGTC 2 cut(s) 119, 1065
ScrFI CCNGG 3 cut(s) 883, 1180, 1515
SduI GDGCHC 4 cut(s) 77, 617, 736, 1444
SfaNI GCATC 5 cut(s) 259, 400, 772, 937, 959
SfcI CTRYAG 3 cut(s) 648, 1149, 1298
SmiMI CAYNNNNRTG 1 cut(s) 1449
SmlI CTYRAG 3 cut(s) 1585, 1592, 1627
SmoI CTYRAG 3 cut(s) 1585, 1592, 1627
SnaBI TACGTA 2 cut(s) 848, 865
SphI GCATGC 2 cut(s) 1086, 1278
SsiI CCGC 3 cut(s) 289, 1218, 1341
SspI AATATT 2 cut(s) 244, 817
SspMI CTAG 3 cut(s) 762, 1209, 1455
StyD4I CCNGG 3 cut(s) 881, 1178, 1513
StyI CCWWGG 3 cut(s) 466, 664, 1291
TaaI ACNGT 2 cut(s) 365, 1365
TaiI ACGT 2 cut(s) 850, 867
TaqI TCGA 4 cut(s) 199, 238, 798, 1336
TatI WGTACW 1 cut(s) 1549
TauI GCSGC 2 cut(s) 1220, 1343
TfiI GAWTC 3 cut(s) 1172, 1475, 1581
TscAI CASTG 3 cut(s) 184, 437, 1370
TseFI GTSAC 4 cut(s) 161, 175, 316, 1057
TseI GCWGC 5 cut(s) 422, 626, 647, 650, 1394
Tsp45I GTSAC 4 cut(s) 161, 175, 316, 1057
TspDTI ATGAA 5 cut(s) 323, 384, 566, 1023, 1536
TspRI CASTG 3 cut(s) 184, 437, 1370
Tth111I GACNNNGTC 1 cut(s) 837
XagI CCTNNNNNAGG 1 cut(s) 256
XapI RAATTY 3 cut(s) 169, 1240, 1523
XceI RCATGY 2 cut(s) 1086, 1278
XcmI CCANNNNNNNNNTGG 1 cut(s) 743
XmnI GAANNNNTTC 3 cut(s) 205, 208, 349
XspI CTAG 3 cut(s) 762, 1209, 1455
Zsp2I ATGCAT 1 cut(s) 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.