FvH4_6g06840

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
4132119 .. 4134015
1897 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g06840.t2

Sequence Viewer

Length: 1239 bp
ATGACAGAGTTCTGCAAGATACCAGAAGCCATGGCATTGCAAATCCTATCAGGGCTGCCACCTAAATCTCTGATGCGATTCAAGTGCGTTCATAAGTCGTGGCATGCTTTGATGAAGGATCCCAACTTCGTGGCCAAGCATCTTTCCAATTCCATGCTCAACAATCTCTACAGTACTACCGGTGTGCTTTTCAAGCGTGAACATTTCAAGGTTCCCAACGCTGCCGAGAAGGGAACCGAAAGTTTTTCATTGATTAGTATCTCCAATGATAATGGGGATAGTGAGCATGATACTCATTGTCTTGTCGAAGATATTACGGAGGGACGTCAGTTTAGTGGGATCGAGGTTCTGGAGTCTGCAAGGATTATAGGGCATTGTCATGGGATTATCTGTCTGCGAAATGCCACTAAGGTAATTCTATGGAACCCAGCAATAAGGGAAGTCAAGATCACAACTCCATATGTTCCGGATGAGAACTTGGGTAATTTGGGAATAGGCTATGACCCTAAATCCAACAATTACAAAGTTGTTCACATTTCATATGGCACTCAGGAAGAACATGGTGATGGACATTTCCTTTTCGATCGACCGAAAGGAGAAGTATACACCATAGGTACTGATTCTTGGAGACAGATCATGACGGGTAGTTCAGAAACGGCAACTACTAAATTTTGGTTTCAGGATTTCCACATGTACTTCAATGGAGTTTGTTATTGGAATGGGCGAGAGCAACTTAAAGACTTTCACGATTTCTATGATGCTCAAGAGGAGTTTTATATTAGGCCAGTGATCATTTCGTTTGATATGGGTGATGAGGTATTTCATAAAATGTTGCTTCCAGATTTTGTATATGGGGACTATATGTGGTGTTATGTTTTGCGTCTTATGGCGTGGAATGAATCTGTAGCTATATTTGGCCTTGATCACGGTATAACTGATCATGAATCCTGGGGACTATGGGTGATGGGGGACTCTGGTGGAGTAACGGGGTCTTGGATAAAGCAATTTAGCTTTGTGAGCACAGTGGGATTCTTGAATACACCATTGCAATTTTGGAAGAGCGATGAGATTCTTATTGTTTCGGAAGAAAGGCGTCTCGTCTCATACAACCTCTATACTGAACAGTTTAAGCATCTACCCATTCATTTTGAAGCTGTTGTTTACATGAAAGATCATTTTGAAGCTGTTGTTTACATGAATAGTATAGTTTCGGTCAATGGTAACAACCCGCTCGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

413

Amino Acids

47.36

Weight (kDa)

5.52

Isoelectric Point (pI)

35.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 43 1.7e-06 F-box domain
F-box-like PF12937 5 - 45 6.4e-06 F-box-like
FBA_3 PF08268 118 - 335 1.9e-16 F-box associated beta propeller domain
FBA_1 PF07734 121 - 370 1.5e-24 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 328
AccBSI CCGCTC 1 cut(s) 1231
AccI GTMKAC 1 cut(s) 603
AccIII TCCGGA 1 cut(s) 466
AciI CCGC 1 cut(s) 1229
AclWI GGATC 3 cut(s) 113, 126, 347
AcoI YGGCCR 1 cut(s) 132
AcsI RAATTY 1 cut(s) 668
AcyI GRCGYC 2 cut(s) 325, 1093
AfaI GTAC 3 cut(s) 175, 616, 695
AflIII ACRYGT 1 cut(s) 690
AgeI ACCGGT 1 cut(s) 179
AgsI TTSAA 7 cut(s) 82, 193, 208, 700, 1036, 1151, 1181
AjnI CCWGG 1 cut(s) 947
AluBI AGCT 4 cut(s) 908, 1011, 1154, 1184
AluI AGCT 4 cut(s) 908, 1011, 1154, 1184
Alw21I GWGCWC 1 cut(s) 1022
Alw26I GTCTC 3 cut(s) 622, 1100, 1105
AlwI GGATC 3 cut(s) 113, 126, 347
Aor13HI TCCGGA 1 cut(s) 466
AoxI GGCC 3 cut(s) 132, 782, 916
ApeKI GCWGC 2 cut(s) 55, 221
ApoI RAATTY 1 cut(s) 668
AsiGI ACCGGT 1 cut(s) 179
AsuHPI GGTGA 3 cut(s) 575, 821, 973
BalI TGGCCA 1 cut(s) 134
BamHI GGATCC 1 cut(s) 118
Bbv12I GWGCWC 1 cut(s) 1022
BbvI GCAGC 2 cut(s) 42, 208
BccI CCATC 2 cut(s) 560, 958
BceAI ACGGC 1 cut(s) 672
BcgI CGANNNNNNTGC 2 cut(s) 66, 100
BciT130I CCWGG 1 cut(s) 949
BclI TGATCA 3 cut(s) 789, 922, 937
BcoDI GTCTC 3 cut(s) 622, 1100, 1105
BfaI CTAG 1 cut(s) 1237
BfmI CTRYAG 2 cut(s) 169, 903
BisI GCNGC 2 cut(s) 56, 222
BlsI GCNGC 2 cut(s) 57, 223
BmcAI AGTACT 1 cut(s) 175
Bme1390I CCNGG 1 cut(s) 949
BmiI GGNNCC 4 cut(s) 120, 213, 235, 425
BmrFI CCNGG 1 cut(s) 949
BmsI GCATC 4 cut(s) 63, 148, 748, 1141
BpmI CTGGAG 1 cut(s) 371
BpuEI CTTGAG 1 cut(s) 747
BsaBI GATNNNNATC 1 cut(s) 257
BsaHI GRCGYC 2 cut(s) 325, 1093
BsaJI CCNNGG 2 cut(s) 30, 948
BsaWI WCCGGW 2 cut(s) 179, 466
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 1 cut(s) 785
Bse3DI GCAATG 2 cut(s) 35, 1043
Bse8I GATNNNNATC 1 cut(s) 257
BseAI TCCGGA 1 cut(s) 466
BseBI CCWGG 1 cut(s) 949
BseDI CCNNGG 2 cut(s) 30, 948
BseGI GGATG 1 cut(s) 475
BseJI GATNNNNATC 1 cut(s) 257
BseMI GCAATG 2 cut(s) 35, 1043
BseMII CTCAG 1 cut(s) 563
BseNI ACTGG 1 cut(s) 785
BseRI GAGGAG 1 cut(s) 782
BseXI GCAGC 2 cut(s) 42, 208
BseYI CCCAGC 1 cut(s) 427
Bsh1285I CGRYCG 2 cut(s) 586, 590
BshFI GGCC 3 cut(s) 134, 784, 918
BshTI ACCGGT 1 cut(s) 179
BsiEI CGRYCG 2 cut(s) 586, 590
BsiHKAI GWGCWC 1 cut(s) 1022
BsiSI CCGG 2 cut(s) 180, 467
BslFI GGGAC 4 cut(s) 336, 869, 966, 983
BsmAI GTCTC 3 cut(s) 622, 1100, 1105
BsmBI CGTCTC 2 cut(s) 1100, 1105
BsmFI GGGAC 4 cut(s) 336, 869, 966, 983
BsnI GGCC 3 cut(s) 134, 784, 918
Bsp1286I GDGCHC 1 cut(s) 1022
Bsp13I TCCGGA 1 cut(s) 466
Bsp143I GATC 9 cut(s) 118, 339, 447, 583, 633, 789, 922, 937, 1171
Bsp19I CCATGG 1 cut(s) 30
BspACI CCGC 1 cut(s) 1229
BspANI GGCC 3 cut(s) 134, 784, 918
BspCNI CTCAG 1 cut(s) 562
BspEI TCCGGA 1 cut(s) 466
BspHI TCATGA 2 cut(s) 636, 940
BspLI GGNNCC 4 cut(s) 120, 213, 235, 425
BspPI GGATC 3 cut(s) 113, 126, 347
BspQI GCTCTTC 1 cut(s) 1052
BsrBI CCGCTC 1 cut(s) 1231
BsrDI GCAATG 2 cut(s) 35, 1043
BsrFI RCCGGY 1 cut(s) 179
BsrI ACTGG 1 cut(s) 785
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 2 cut(s) 30, 948
BssMI GATC 9 cut(s) 118, 339, 447, 583, 633, 789, 922, 937, 1171
BssNAI GTATAC 1 cut(s) 604
BssNI GRCGYC 2 cut(s) 325, 1093
BssT1I CCWWGG 1 cut(s) 30
Bst1107I GTATAC 1 cut(s) 604
Bst2UI CCWGG 1 cut(s) 949
Bst4CI ACNGT 4 cut(s) 173, 929, 1024, 1125
Bst6I CTCTTC 1 cut(s) 1052
BstACI GRCGYC 2 cut(s) 325, 1093
BstC8I GCNNGC 1 cut(s) 105
BstDEI CTNAG 2 cut(s) 408, 549
BstDSI CCRYGG 1 cut(s) 30
BstF5I GGATG 1 cut(s) 475
BstKTI GATC 9 cut(s) 121, 342, 450, 586, 636, 792, 925, 940, 1174
BstMAI GTCTC 3 cut(s) 622, 1100, 1105
BstMBI GATC 9 cut(s) 118, 339, 447, 583, 633, 789, 922, 937, 1171
BstMCI CGRYCG 2 cut(s) 586, 590
BstMWI GCNNNNNNNGC 2 cut(s) 193, 1017
BstNI CCWGG 1 cut(s) 949
BstNSI RCATGY 2 cut(s) 107, 694
BstSCI CCNGG 1 cut(s) 947
BstSFI CTRYAG 2 cut(s) 169, 903
BstV1I GCAGC 2 cut(s) 42, 208
BstX2I RGATCY 1 cut(s) 118
BstXI CCANNNNNNTGG 1 cut(s) 130
BstYI RGATCY 1 cut(s) 118
BstZ17I GTATAC 1 cut(s) 604
BsuRI GGCC 3 cut(s) 134, 784, 918
BtgI CCRYGG 1 cut(s) 30
BtgZI GCGATG 1 cut(s) 1077
BtsCI GGATG 1 cut(s) 475
BtsIMutI CAGTG 2 cut(s) 792, 1029
Cac8I GCNNGC 1 cut(s) 105
CciI TCATGA 2 cut(s) 636, 940
Cfr10I RCCGGY 1 cut(s) 179
CseI GACGC 2 cut(s) 869, 1082
Csp6I GTAC 3 cut(s) 174, 615, 694
CspAI ACCGGT 1 cut(s) 179
CviQI GTAC 3 cut(s) 174, 615, 694
DdeI CTNAG 2 cut(s) 408, 549
DpnI GATC 9 cut(s) 120, 341, 449, 585, 635, 791, 924, 939, 1173
DpnII GATC 9 cut(s) 118, 339, 447, 583, 633, 789, 922, 937, 1171
EaeI YGGCCR 1 cut(s) 132
Eam1104I CTCTTC 1 cut(s) 1052
EarI CTCTTC 1 cut(s) 1052
Eco130I CCWWGG 1 cut(s) 30
EcoRII CCWGG 1 cut(s) 947
EcoT14I CCWWGG 1 cut(s) 30
ErhI CCWWGG 1 cut(s) 30
Esp3I CGTCTC 2 cut(s) 1100, 1105
FaqI GGGAC 4 cut(s) 336, 869, 966, 983
FauI CCCGC 1 cut(s) 1236
FauNDI CATATG 2 cut(s) 460, 541
FbaI TGATCA 3 cut(s) 789, 922, 937
FblI GTMKAC 1 cut(s) 603
Fnu4HI GCNGC 2 cut(s) 56, 222
FokI GGATG 1 cut(s) 482
Fsp4HI GCNGC 2 cut(s) 56, 222
FspBI CTAG 1 cut(s) 1237
GluI GCNGC 2 cut(s) 56, 222
GsaI CCCAGC 1 cut(s) 431
GsuI CTGGAG 1 cut(s) 371
HaeIII GGCC 3 cut(s) 134, 784, 918
HapII CCGG 2 cut(s) 180, 467
HgaI GACGC 2 cut(s) 869, 1082
Hin1I GRCGYC 2 cut(s) 325, 1093
HinfI GANTC 8 cut(s) 78, 353, 620, 899, 944, 971, 1029, 1069
HpaII CCGG 2 cut(s) 180, 467
HphI GGTGA 3 cut(s) 575, 821, 973
Hpy166II GTNNAC 5 cut(s) 200, 532, 604, 1162, 1192
Hpy188I TCNGA 3 cut(s) 72, 652, 1084
Hpy8I GTNNAC 5 cut(s) 200, 532, 604, 1162, 1192
HpyAV CCTTC 2 cut(s) 109, 223
HpyCH4III ACNGT 4 cut(s) 173, 929, 1024, 1125
HpyCH4IV ACGT 1 cut(s) 325
HpyCH4V TGCA 4 cut(s) 15, 40, 359, 1048
HpyF10VI GCNNNNNNNGC 2 cut(s) 193, 1017
HpyF3I CTNAG 2 cut(s) 408, 549
HpySE526I ACGT 1 cut(s) 325
Hsp92I GRCGYC 2 cut(s) 325, 1093
Kpn2I TCCGGA 1 cut(s) 466
Ksp22I TGATCA 3 cut(s) 789, 922, 937
Kzo9I GATC 9 cut(s) 118, 339, 447, 583, 633, 789, 922, 937, 1171
LguI GCTCTTC 1 cut(s) 1052
Lsp1109I GCAGC 2 cut(s) 42, 208
LweI GCATC 4 cut(s) 63, 148, 748, 1141
MaeI CTAG 1 cut(s) 1237
MaeII ACGT 1 cut(s) 325
MaeIII GTNAC 2 cut(s) 982, 1220
MalI GATC 9 cut(s) 120, 341, 449, 585, 635, 791, 924, 939, 1173
MbiI CCGCTC 1 cut(s) 1231
MboI GATC 9 cut(s) 118, 339, 447, 583, 633, 789, 922, 937, 1171
MboII GAAGA 4 cut(s) 320, 566, 1069, 1097
MflI RGATCY 1 cut(s) 118
MhlI GDGCHC 1 cut(s) 1022
MlsI TGGCCA 1 cut(s) 134
MluCI AATT 7 cut(s) 148, 414, 484, 517, 668, 1004, 1049
MluNI TGGCCA 1 cut(s) 134
MlyI GAGTC 2 cut(s) 362, 965
MmeI TCCRAC 1 cut(s) 537
MnlI CCTC 5 cut(s) 313, 337, 760, 808, 1121
Mox20I TGGCCA 1 cut(s) 134
MroI TCCGGA 1 cut(s) 466
MscI TGGCCA 1 cut(s) 134
MseI TTAA 2 cut(s) 735, 1128
MslI CAYNNNNRTG 2 cut(s) 378, 564
Msp20I TGGCCA 1 cut(s) 134
MspI CCGG 2 cut(s) 180, 467
MspR9I CCNGG 1 cut(s) 949
MvaI CCWGG 1 cut(s) 949
MwoI GCNNNNNNNGC 2 cut(s) 193, 1017
NcoI CCATGG 1 cut(s) 30
NdeI CATATG 2 cut(s) 460, 541
NdeII GATC 9 cut(s) 118, 339, 447, 583, 633, 789, 922, 937, 1171
NlaIV GGNNCC 4 cut(s) 120, 213, 235, 425
NmeAIII GCCGAG 1 cut(s) 250
NspI RCATGY 2 cut(s) 107, 694
PaeI GCATGC 1 cut(s) 107
PagI TCATGA 2 cut(s) 636, 940
PciI ACATGT 1 cut(s) 690
PciSI GCTCTTC 1 cut(s) 1052
PfeI GAWTC 6 cut(s) 78, 620, 899, 944, 1029, 1069
PinAI ACCGGT 1 cut(s) 179
PkrI GCNGC 2 cut(s) 57, 223
Ple19I CGATCG 1 cut(s) 586
PleI GAGTC 2 cut(s) 361, 965
PpsI GAGTC 2 cut(s) 361, 965
PscI ACATGT 1 cut(s) 690
Psp6I CCWGG 1 cut(s) 947
PspFI CCCAGC 1 cut(s) 427
PspGI CCWGG 1 cut(s) 947
PspN4I GGNNCC 4 cut(s) 120, 213, 235, 425
PsuI RGATCY 1 cut(s) 118
PvuI CGATCG 1 cut(s) 586
RsaI GTAC 3 cut(s) 175, 616, 695
RsaNI GTAC 3 cut(s) 174, 615, 694
RseI CAYNNNNRTG 2 cut(s) 378, 564
SapI GCTCTTC 1 cut(s) 1052
SaqAI TTAA 2 cut(s) 735, 1128
SatI GCNGC 2 cut(s) 56, 222
Sau3AI GATC 9 cut(s) 118, 339, 447, 583, 633, 789, 922, 937, 1171
ScaI AGTACT 1 cut(s) 175
SchI GAGTC 2 cut(s) 362, 965
ScrFI CCNGG 1 cut(s) 949
SduI GDGCHC 1 cut(s) 1022
SfaNI GCATC 4 cut(s) 63, 148, 748, 1141
SfcI CTRYAG 2 cut(s) 169, 903
SmiMI CAYNNNNRTG 2 cut(s) 378, 564
SmlI CTYRAG 1 cut(s) 762
SmoI CTYRAG 1 cut(s) 762
SphI GCATGC 1 cut(s) 107
Sse9I AATT 7 cut(s) 148, 414, 484, 517, 668, 1004, 1049
SsiI CCGC 1 cut(s) 1229
SspMI CTAG 1 cut(s) 1237
StyD4I CCNGG 1 cut(s) 947
StyI CCWWGG 1 cut(s) 30
TaaI ACNGT 4 cut(s) 173, 929, 1024, 1125
TaiI ACGT 1 cut(s) 328
TaqI TCGA 4 cut(s) 306, 342, 582, 586
TaqII GACCGA 2 cut(s) 604, 1201
TasI AATT 7 cut(s) 148, 414, 484, 517, 668, 1004, 1049
TatI WGTACW 2 cut(s) 173, 693
TfiI GAWTC 6 cut(s) 78, 620, 899, 944, 1029, 1069
Tru1I TTAA 2 cut(s) 735, 1128
Tru9I TTAA 2 cut(s) 735, 1128
TscAI CASTG 2 cut(s) 792, 1029
TseI GCWGC 2 cut(s) 55, 221
TspGWI ACGGA 1 cut(s) 332
TspRI CASTG 2 cut(s) 792, 1029
XapI RAATTY 1 cut(s) 668
XceI RCATGY 2 cut(s) 107, 694
XcmI CCANNNNNNNNNTGG 1 cut(s) 1050
XmiI GTMKAC 1 cut(s) 603
XspI CTAG 1 cut(s) 1237
ZraI GACGTC 1 cut(s) 326
ZrmI AGTACT 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.