Rw3G006080

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
5414435 .. 5415703
1269 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G006080.1

Sequence Viewer

Length: 1269 bp
ATGGATGAAAATAATATTGGAATAGAAACAAGGTACAAGACGAAGAAGAAGGAGATGGGAGGAAAAACAAGAGGGTTTTCCAAAATGTCAGAAGAGATGGTGGTGCCAATTCTACTAAGGTTGTGTCCTGAAACTCTGATGCGATTCAAGTGCGTTCGTAAGTCATGGAATACTATGATCAGCAACCCCAGCTTTGTAGCCAAGCATCTTTCAAATATCTCTACCGAAAAGAAGCACTCCACCTTCGTTTTGTGCAAGCGTTTTGTCCCCAGGGATAATGACGAGAGGGAAGCTGTATGTTCATTGATTACATTATTTCATGGCAATGATGCTGCTGATCATGAGAATCTCCCTCAGACTGTTGTCAAGGACATTGAATTTCCACTTTCTATGGATTTAATCACGAGGAGCACATTTCCTGAAAATGAGATTCTTGGAGCTGTAGGAATAAGAGGACATTGTAATGGGATCATTTGTCTAGTTGATGGTCATAACACTGTCTTATGGAATCCAGCAATCAGGGAATTCAAGATTCTTCCCCAGGCATGCATTCTAGAGAGAACCTTGGATTCTGTCGGATTTGGCTATGACACCATATATAACGATTACAAAGTCTTTAGTATTGTAACGCATGATGAGGGTGGGACACCAAAAGTAGAAGTCTACAGCCTGAGTACGGACTCTTGGGCAGAGATAAACAATGATCATTTAGAAACAGAAACAACGAACTTTTACCCTCAGTTTTTCCAAATGTACTTCAATGGAATCTGTTACTGGACCGGATGTGAGCAACAAAAGGAATTCATGAACTATTTAGATGAACAAGACGAGGAATGGATTAGGCAGCTAATCATTGTCTTTGATCTGAGGGATGGAGTATTTGGTAACATACTATTTCCGTATAGTTTATACGAGCCAATAAGTCCTTATTTAGAAATGCAAGTTATTGTCTGGAATGAATCTGTCGCTCTTTTTGGTCAATATCGTTTTGATGTTTCTGATGCTGCTTTTGGATTATGGATAATGGATGATGTAGTCGAGGGTTCTTGGACAAAACACCTAACCCTAGATGCCATATTAGGTATTTGGAAGAATTTGAAATTTTGGAAGAGCGACGAGATTCTTATGATTGCCAATGACAAACGTATACTCTCTTACAACGTCATTAGTCAAGAGATTGAATATCTTCCGATTGAGAGTCTGTATCCAGATCATTCCGAAGCTGCAGTCTATGTAAAGAGTATAGTTTCTATTATACATGGGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

422

Amino Acids

48.76

Weight (kDa)

5.0

Isoelectric Point (pI)

39.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 149 - 355 2.2e-18 F-box associated beta propeller domain
FBA_1 PF07734 153 - 384 2.5e-22 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 103
AccI GTMKAC 2 cut(s) 663, 1147
AclWI GGATC 1 cut(s) 476
AcsI RAATTY 5 cut(s) 377, 524, 800, 1093, 1100
AfaI GTAC 3 cut(s) 35, 676, 755
AfiI CCNNNNNNNGG 1 cut(s) 676
AgsI TTSAA 7 cut(s) 148, 213, 377, 529, 760, 1099, 1181
AjnI CCWGG 2 cut(s) 269, 540
AjuI GAANNNNNNNTTGG 1 cut(s) 32
AluBI AGCT 5 cut(s) 192, 293, 440, 847, 1223
AluI AGCT 5 cut(s) 192, 293, 440, 847, 1223
Alw21I GWGCWC 1 cut(s) 413
AlwI GGATC 1 cut(s) 476
ApeKI GCWGC 4 cut(s) 332, 844, 1004, 1223
ApoI RAATTY 5 cut(s) 377, 524, 800, 1093, 1100
ArsI GACNNNNNNTTYG 2 cut(s) 1212, 1244
Asp700I GAANNNNTTC 1 cut(s) 1185
AspS9I GGNCC 1 cut(s) 777
AvaII GGWCC 1 cut(s) 777
BanI GGYRCC 1 cut(s) 103
BauI CACGAG 1 cut(s) 403
Bbv12I GWGCWC 1 cut(s) 413
BbvI GCAGC 4 cut(s) 319, 856, 991, 1210
BccI CCATC 4 cut(s) 49, 91, 479, 866
BcgI CGANNNNNNTGC 2 cut(s) 132, 166
BciT130I CCWGG 2 cut(s) 271, 542
BciVI GTATCC 1 cut(s) 1215
BclI TGATCA 3 cut(s) 177, 337, 703
BfaI CTAG 3 cut(s) 479, 554, 1067
BfmI CTRYAG 3 cut(s) 441, 664, 1224
BfuI GTATCC 1 cut(s) 1215
BisI GCNGC 4 cut(s) 333, 845, 1005, 1224
BlsI GCNGC 4 cut(s) 334, 846, 1006, 1225
Bme1390I CCNGG 2 cut(s) 271, 542
Bme18I GGWCC 1 cut(s) 777
BmgT120I GGNCC 1 cut(s) 777
BmiI GGNNCC 1 cut(s) 105
BmrFI CCNGG 2 cut(s) 271, 542
BmsI GCATC 5 cut(s) 129, 214, 319, 991, 1060
BoxI GACNNNNGTC 1 cut(s) 362
BsaJI CCNNGG 4 cut(s) 269, 270, 540, 564
BsaWI WCCGGW 1 cut(s) 779
Bsc4I CCNNNNNNNGG 1 cut(s) 676
Bse1I ACTGG 1 cut(s) 779
Bse3DI GCAATG 1 cut(s) 331
BseBI CCWGG 2 cut(s) 271, 542
BseDI CCNNGG 4 cut(s) 269, 270, 540, 564
BseGI GGATG 4 cut(s) 10, 788, 877, 1033
BseLI CCNNNNNNNGG 1 cut(s) 676
BseMI GCAATG 1 cut(s) 331
BseMII CTCAG 4 cut(s) 368, 662, 752, 857
BseNI ACTGG 1 cut(s) 779
BseRI GAGGAG 1 cut(s) 421
BseXI GCAGC 4 cut(s) 319, 856, 991, 1210
BseYI CCCAGC 1 cut(s) 188
BshNI GGYRCC 1 cut(s) 103
BsiHKAI GWGCWC 1 cut(s) 413
BsiSI CCGG 1 cut(s) 780
BslFI GGGAC 2 cut(s) 251, 658
BslI CCNNNNNNNGG 1 cut(s) 676
BsmFI GGGAC 2 cut(s) 251, 658
BsmI GAATGC 1 cut(s) 549
Bsp1286I GDGCHC 1 cut(s) 413
Bsp143I GATC 6 cut(s) 177, 337, 468, 703, 862, 1210
BspCNI CTCAG 4 cut(s) 367, 663, 751, 858
BspHI TCATGA 2 cut(s) 340, 804
BspLI GGNNCC 1 cut(s) 105
BspMAI CTGCAG 1 cut(s) 1228
BspPI GGATC 1 cut(s) 476
BspQI GCTCTTC 1 cut(s) 1103
BspT107I GGYRCC 1 cut(s) 103
BsrDI GCAATG 1 cut(s) 331
BsrI ACTGG 1 cut(s) 779
BssECI CCNNGG 4 cut(s) 269, 270, 540, 564
BssMI GATC 6 cut(s) 177, 337, 468, 703, 862, 1210
BssNAI GTATAC 1 cut(s) 1148
BssSI CACGAG 1 cut(s) 403
BssT1I CCWWGG 1 cut(s) 564
Bst1107I GTATAC 1 cut(s) 1148
Bst2BI CACGAG 1 cut(s) 403
Bst2UI CCWGG 2 cut(s) 271, 542
Bst4CI ACNGT 2 cut(s) 361, 499
Bst6I CTCTTC 2 cut(s) 87, 1103
BstC8I GCNNGC 2 cut(s) 257, 547
BstDEI CTNAG 5 cut(s) 116, 354, 671, 738, 866
BstF5I GGATG 4 cut(s) 10, 788, 877, 1033
BstKTI GATC 6 cut(s) 180, 340, 471, 706, 865, 1213
BstMBI GATC 6 cut(s) 177, 337, 468, 703, 862, 1210
BstMWI GCNNNNNNNGC 1 cut(s) 189
BstNI CCWGG 2 cut(s) 271, 542
BstNSI RCATGY 1 cut(s) 549
BstPAI GACNNNNGTC 1 cut(s) 362
BstSCI CCNGG 2 cut(s) 269, 540
BstSFI CTRYAG 3 cut(s) 441, 664, 1224
BstV1I GCAGC 4 cut(s) 319, 856, 991, 1210
BstZ17I GTATAC 1 cut(s) 1148
BsuI GTATCC 1 cut(s) 1215
BtsCI GGATG 4 cut(s) 10, 788, 877, 1033
BtsIMutI CAGTG 1 cut(s) 495
Cac8I GCNNGC 2 cut(s) 257, 547
CciI TCATGA 2 cut(s) 340, 804
Cfr13I GGNCC 1 cut(s) 777
Csp6I GTAC 3 cut(s) 34, 675, 754
CviAII CATG 7 cut(s) 165, 320, 341, 546, 632, 805, 1259
CviJI RGCY 9 cut(s) 192, 200, 293, 440, 585, 669, 847, 916, 1223
CviKI_1 RGCY 9 cut(s) 192, 200, 293, 440, 585, 669, 847, 916, 1223
CviQI GTAC 3 cut(s) 34, 675, 754
DdeI CTNAG 5 cut(s) 116, 354, 671, 738, 866
DpnI GATC 6 cut(s) 179, 339, 470, 705, 864, 1212
DpnII GATC 6 cut(s) 177, 337, 468, 703, 862, 1210
Eam1104I CTCTTC 2 cut(s) 87, 1103
EarI CTCTTC 2 cut(s) 87, 1103
Eco130I CCWWGG 1 cut(s) 564
Eco47I GGWCC 1 cut(s) 777
EcoRI GAATTC 2 cut(s) 524, 800
EcoRII CCWGG 2 cut(s) 269, 540
EcoT14I CCWWGG 1 cut(s) 564
EcoT22I ATGCAT 1 cut(s) 551
ErhI CCWWGG 1 cut(s) 564
FaeI CATG 7 cut(s) 168, 323, 344, 549, 635, 808, 1262
FaqI GGGAC 2 cut(s) 251, 658
FatI CATG 7 cut(s) 164, 319, 340, 545, 631, 804, 1258
FbaI TGATCA 3 cut(s) 177, 337, 703
FblI GTMKAC 2 cut(s) 663, 1147
Fnu4HI GCNGC 4 cut(s) 333, 845, 1005, 1224
FokI GGATG 4 cut(s) 17, 795, 884, 1040
Fsp4HI GCNGC 4 cut(s) 333, 845, 1005, 1224
FspBI CTAG 3 cut(s) 479, 554, 1067
GluI GCNGC 4 cut(s) 333, 845, 1005, 1224
GsaI CCCAGC 1 cut(s) 192
HapII CCGG 1 cut(s) 780
Hin1II CATG 7 cut(s) 168, 323, 344, 549, 635, 808, 1262
HpaII CCGG 1 cut(s) 780
Hpy166II GTNNAC 2 cut(s) 664, 1148
Hpy188I TCNGA 8 cut(s) 91, 138, 357, 578, 867, 1000, 1191, 1219
Hpy8I GTNNAC 2 cut(s) 664, 1148
Hpy99I CGWCG 1 cut(s) 1118
HpyAV CCTTC 2 cut(s) 43, 253
HpyCH4III ACNGT 2 cut(s) 361, 499
HpyCH4IV ACGT 2 cut(s) 1144, 1161
HpyCH4V TGCA 4 cut(s) 255, 549, 940, 1226
HpyF10VI GCNNNNNNNGC 1 cut(s) 189
HpyF3I CTNAG 5 cut(s) 116, 354, 671, 738, 866
HpySE526I ACGT 2 cut(s) 1144, 1161
Hsp92II CATG 7 cut(s) 168, 323, 344, 549, 635, 808, 1262
Ksp22I TGATCA 3 cut(s) 177, 337, 703
Kzo9I GATC 6 cut(s) 177, 337, 468, 703, 862, 1210
LguI GCTCTTC 1 cut(s) 1103
LmnI GCTCC 2 cut(s) 408, 437
Lsp1109I GCAGC 4 cut(s) 319, 856, 991, 1210
LweI GCATC 5 cut(s) 129, 214, 319, 991, 1060
MaeI CTAG 3 cut(s) 479, 554, 1067
MaeII ACGT 2 cut(s) 1144, 1161
MaeIII GTNAC 3 cut(s) 625, 770, 884
MalI GATC 6 cut(s) 179, 339, 470, 705, 864, 1212
MboI GATC 6 cut(s) 177, 337, 468, 703, 862, 1210
MboII GAAGA 7 cut(s) 55, 58, 104, 527, 1102, 1120, 1178
MhlI GDGCHC 1 cut(s) 413
MluCI AATT 6 cut(s) 108, 377, 524, 800, 1093, 1100
MlyI GAGTC 2 cut(s) 674, 1207
MmeI TCCRAC 1 cut(s) 556
Mph1103I ATGCAT 1 cut(s) 551
MroXI GAANNNNTTC 1 cut(s) 1185
MseI TTAA 1 cut(s) 398
MslI CAYNNNNRTG 2 cut(s) 324, 462
MspI CCGG 1 cut(s) 780
MspR9I CCNGG 2 cut(s) 271, 542
Mva1269I GAATGC 1 cut(s) 549
MvaI CCWGG 2 cut(s) 271, 542
MwoI GCNNNNNNNGC 1 cut(s) 189
NdeII GATC 6 cut(s) 177, 337, 468, 703, 862, 1210
NlaIII CATG 7 cut(s) 168, 323, 344, 549, 635, 808, 1262
NlaIV GGNNCC 1 cut(s) 105
NsiI ATGCAT 1 cut(s) 551
NspI RCATGY 1 cut(s) 549
PaeI GCATGC 1 cut(s) 549
PagI TCATGA 2 cut(s) 340, 804
PasI CCCWGGG 1 cut(s) 270
PciSI GCTCTTC 1 cut(s) 1103
PctI GAATGC 1 cut(s) 549
PdmI GAANNNNTTC 1 cut(s) 1185
PfeI GAWTC 9 cut(s) 144, 346, 430, 508, 532, 569, 765, 959, 1120
PkrI GCNGC 4 cut(s) 334, 846, 1006, 1225
PleI GAGTC 2 cut(s) 674, 1206
PpsI GAGTC 2 cut(s) 674, 1206
PshAI GACNNNNGTC 1 cut(s) 362
Psp6I CCWGG 2 cut(s) 269, 540
PspFI CCCAGC 1 cut(s) 188
PspGI CCWGG 2 cut(s) 269, 540
PspN4I GGNNCC 1 cut(s) 105
PspPI GGNCC 1 cut(s) 777
PstI CTGCAG 1 cut(s) 1228
RsaI GTAC 3 cut(s) 35, 676, 755
RsaNI GTAC 3 cut(s) 34, 675, 754
RseI CAYNNNNRTG 2 cut(s) 324, 462
SapI GCTCTTC 1 cut(s) 1103
SaqAI TTAA 1 cut(s) 398
SatI GCNGC 4 cut(s) 333, 845, 1005, 1224
Sau3AI GATC 6 cut(s) 177, 337, 468, 703, 862, 1210
Sau96I GGNCC 1 cut(s) 777
SchI GAGTC 2 cut(s) 674, 1207
ScrFI CCNGG 2 cut(s) 271, 542
SduI GDGCHC 1 cut(s) 413
SfaNI GCATC 5 cut(s) 129, 214, 319, 991, 1060
SfcI CTRYAG 3 cut(s) 441, 664, 1224
SinI GGWCC 1 cut(s) 777
SmiMI CAYNNNNRTG 2 cut(s) 324, 462
SphI GCATGC 1 cut(s) 549
Sse9I AATT 6 cut(s) 108, 377, 524, 800, 1093, 1100
SspI AATATT 1 cut(s) 16
SspMI CTAG 3 cut(s) 479, 554, 1067
StyD4I CCNGG 2 cut(s) 269, 540
StyI CCWWGG 1 cut(s) 564
TaaI ACNGT 2 cut(s) 361, 499
TaiI ACGT 2 cut(s) 1147, 1164
TaqI TCGA 1 cut(s) 1038
TasI AATT 6 cut(s) 108, 377, 524, 800, 1093, 1100
TatI WGTACW 1 cut(s) 753
TfiI GAWTC 9 cut(s) 144, 346, 430, 508, 532, 569, 765, 959, 1120
Tru1I TTAA 1 cut(s) 398
Tru9I TTAA 1 cut(s) 398
TscAI CASTG 1 cut(s) 502
TseI GCWGC 4 cut(s) 332, 844, 1004, 1223
TspDTI ATGAA 7 cut(s) 21, 291, 308, 793, 821, 834, 972
TspGWI ACGGA 2 cut(s) 692, 888
TspRI CASTG 1 cut(s) 502
VpaK11BI GGWCC 1 cut(s) 777
XapI RAATTY 5 cut(s) 377, 524, 800, 1093, 1100
XbaI TCTAGA 1 cut(s) 553
XceI RCATGY 1 cut(s) 549
XmiI GTMKAC 2 cut(s) 663, 1147
XmnI GAANNNNTTC 1 cut(s) 1185
XspI CTAG 3 cut(s) 479, 554, 1067
Zsp2I ATGCAT 1 cut(s) 551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.