pycom04g17600

F-box protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
19922651 .. 19925145
2495 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g17600.2

Sequence Viewer

Length: 1569 bp
ATGACATACTTCTGCAACATCCCAGACGAAATAGGGTTGGAAATCCTAGCAAGGCTGCCTCCCAAATCCCTAATGCGATTCAAATGCGTCCGTAAGTCGTGGTATGCTCTTTTTAACAATCCCCATTTCGTAGCCGAGCACCTCAGTTTATACAACGACCAACCCTCCACCTCCTCCACTTGCATCCTTTTCAAGCGTTTCGTCCTCAGCACTACCGAATTCAACAACGAGGAACTCGTGTTTTCATTCCTTAGTCTTCGCAATGACAAAGACAGCGATGTTGATCATAACCCTAATTGTACTGTTGAGGACCTACATTTTCCGCTTTCTATGGGATTAAAAAGCAGGGGACAATTTATTGAGCTCCCTGGCCAAGAACTTGGTGAATCTGTGAGTATTGTAGGTCATTGTGATGGGATTTTTTGTTTATATCTTTATACCGGAAAACTTGTTTTATACAATCCGGCAATCAAGGAATTTAGGGTTCTTCCCGAGTCATGCTTCGAAGATGCGTTTTCGTGTACGTTGGGATTTGGCTATAATCCGAATCGTAAAGATTACATGCTCATCAGCATCATATCTTATGGTGAGGAAATATTAGAGGATGATCGTCTCATTATTCATCCTCCCCAAGCAGAAATATACACATTGAGTACTAATTCTTGGAAAAAGATCGGGACAGACTACTTGGAAACAGAAAATGCTTATTTTTGGGGTAACGATAATTTGTCGACCTACTTCGAGGGAGTTTTTTATGGGTTGGGATATGAGGAAAAGAAGGAATTTCTGCCATTTTATGACAGACTTGAGGAGGAAAAGAAGCAATTGGTCATTTCTTACGACGCGAGTAATGAAGTTTTTCATGATATATTACTTCCGGATTGTTTCTACGAGTTTCCGACGCATGAGTTCTCGCTTACAGTGTGGAATGAATCTGTTGCTCTTTTTGGCTTTTACCATGGTGAAGATGAAGAACCCTTTGAAATTTGGGTGATGGATGAATTTGATGATGGTTGGACAAAACATTTATCCGTTGTGCCCAAACTGGATCAAGAGGTAGATATTCCATTAATACTTTGGAAGAGGGACGAGGTTCTTTTGGTTGACATAGATGGACGCTTAGCCAGCTACAACTTCAACACCGAAAATCTTACGTATCTTCCTGTTCATGGTGTGTCCCGAGGAGATTTTCAAGCTGTTGTTTGCGTCGATAGTATGGTTTCTGTCAATGGAGATAAAAGGGTCGATGTGTTTGACAACAAGAGTTGGTGGGTAGGTACCGTTACTGAGAAGAGAGGGGAGGACGAATACTGGGTGTACTTTGAAACAACAGCGGATCATACTGCGTATCCTAAGAGCAAACTGATGTTTCATGAGGACTGGATCGATGGAATGTGGGTGAATTACAACAAGAAGAAGAGAGCTTTTCGTGCCGACGGAAAGCCGGTGGAGTGCAAGAAGAGAGCCTGGGTCGATGAAAGGGTTGAAGACTACAAGAAAGTGCGCATCGATGGAAAGTTGCTGGATTGCAAGAACAAGTTAAGAGTCAGCGTTGTAACTCCTGTTTAA

Protein Analysis

523

Amino Acids

60.87

Weight (kDa)

4.82

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1505
Acc65I GGTACC 1 cut(s) 1277
AccB1I GGYRCC 1 cut(s) 1277
AccI GTMKAC 1 cut(s) 731
AccII CGCG 1 cut(s) 845
AccIII TCCGGA 1 cut(s) 877
AciI CCGC 2 cut(s) 323, 1334
AclWI GGATC 3 cut(s) 1056, 1344, 1391
AcoI YGGCCR 1 cut(s) 370
AcsI RAATTY 5 cut(s) 218, 476, 782, 984, 1001
AfaI GTAC 5 cut(s) 301, 523, 655, 1279, 1319
AfiI CCNNNNNNNGG 1 cut(s) 1169
AgsI TTSAA 8 cut(s) 82, 193, 223, 983, 1138, 1193, 1325, 1487
AjnI CCWGG 2 cut(s) 367, 1466
AluBI AGCT 4 cut(s) 364, 1128, 1196, 1424
AluI AGCT 4 cut(s) 364, 1128, 1196, 1424
Alw21I GWGCWC 2 cut(s) 141, 366
Alw26I GTCTC 1 cut(s) 617
AlwI GGATC 3 cut(s) 1056, 1344, 1391
Ama87I CYCGRG 2 cut(s) 491, 1179
Aor13HI TCCGGA 1 cut(s) 877
AoxI GGCC 1 cut(s) 370
ApeKI GCWGC 1 cut(s) 55
ApoI RAATTY 5 cut(s) 218, 476, 782, 984, 1001
AseI ATTAAT 1 cut(s) 1070
Asp700I GAANNNNTTC 1 cut(s) 858
Asp718I GGTACC 1 cut(s) 1277
AspLEI GCGC 1 cut(s) 1506
AspS9I GGNCC 1 cut(s) 310
AsuHPI GGTGA 5 cut(s) 395, 599, 974, 1003, 1411
AsuII TTCGAA 1 cut(s) 504
AvaI CYCGRG 2 cut(s) 491, 1179
AvaII GGWCC 1 cut(s) 310
BaeGI GKGCMC 1 cut(s) 1041
BalI TGGCCA 1 cut(s) 372
BanI GGYRCC 1 cut(s) 1277
BanII GRGCYC 1 cut(s) 366
BauI CACGAG 1 cut(s) 236
BbsI GAAGAC 2 cut(s) 248, 1494
Bbv12I GWGCWC 2 cut(s) 141, 366
BbvCI CCTCAGC 1 cut(s) 206
BbvI GCAGC 1 cut(s) 42
BccI CCATC 6 cut(s) 407, 988, 1004, 1106, 1382, 1505
BcgI CGANNNNNNTGC 2 cut(s) 66, 100
BciT130I CCWGG 2 cut(s) 369, 1468
BciVI GTATCC 1 cut(s) 1359
BclI TGATCA 1 cut(s) 283
BcoDI GTCTC 1 cut(s) 617
BfaI CTAG 1 cut(s) 47
BfuI GTATCC 1 cut(s) 1359
BisI GCNGC 1 cut(s) 56
BlpI GCTNAGC 1 cut(s) 1120
BlsI GCNGC 1 cut(s) 57
BmcAI AGTACT 1 cut(s) 655
Bme1390I CCNGG 2 cut(s) 369, 1468
Bme18I GGWCC 1 cut(s) 310
BmeT110I CYCGRG 2 cut(s) 491, 1179
BmgT120I GGNCC 1 cut(s) 310
BmiI GGNNCC 1 cut(s) 1279
BmrFI CCNGG 2 cut(s) 369, 1468
BmrI ACTGGG 1 cut(s) 1321
BmsI GCATC 4 cut(s) 192, 499, 582, 1515
BmuI ACTGGG 1 cut(s) 1321
BpiI GAAGAC 2 cut(s) 248, 1494
Bpu10I CCTNAGC 1 cut(s) 206
Bpu1102I GCTNAGC 1 cut(s) 1120
Bpu14I TTCGAA 1 cut(s) 504
BpuEI CTTGAG 1 cut(s) 827
Bsa29I ATCGAT 2 cut(s) 1386, 1509
BsaAI YACGTR 1 cut(s) 1155
BsaBI GATNNNNATC 1 cut(s) 282
BsaJI CCNNGG 4 cut(s) 367, 958, 1180, 1467
BsaWI WCCGGW 2 cut(s) 440, 877
BsaXI ACNNNNNCTCC 2 cut(s) 149, 179
Bsc4I CCNNNNNNNGG 1 cut(s) 1169
Bse118I RCCGGY 1 cut(s) 1444
Bse1I ACTGG 3 cut(s) 1050, 1316, 1385
Bse3DI GCAATG 1 cut(s) 268
Bse8I GATNNNNATC 1 cut(s) 282
BseAI TCCGGA 1 cut(s) 877
BseBI CCWGG 2 cut(s) 369, 1468
BseCI ATCGAT 2 cut(s) 1386, 1509
BseDI CCNNGG 4 cut(s) 367, 958, 1180, 1467
BseGI GGATG 5 cut(s) 18, 183, 610, 622, 1003
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 1 cut(s) 1169
BseMI GCAATG 1 cut(s) 268
BseMII CTCAG 3 cut(s) 157, 220, 1278
BseNI ACTGG 3 cut(s) 1050, 1316, 1385
BseRI GAGGAG 3 cut(s) 163, 824, 1197
BseSI GKGCMC 1 cut(s) 1041
BseXI GCAGC 1 cut(s) 42
Bsh1236I CGCG 1 cut(s) 845
BshFI GGCC 1 cut(s) 372
BshNI GGYRCC 1 cut(s) 1277
BshVI ATCGAT 2 cut(s) 1386, 1509
BsiHKAI GWGCWC 2 cut(s) 141, 366
BsiHKCI CYCGRG 2 cut(s) 491, 1179
BsiSI CCGG 4 cut(s) 441, 464, 878, 1445
BslFI GGGAC 4 cut(s) 363, 691, 1100, 1162
BslI CCNNNNNNNGG 1 cut(s) 1169
BsmAI GTCTC 1 cut(s) 617
BsmBI CGTCTC 1 cut(s) 617
BsmFI GGGAC 4 cut(s) 363, 691, 1100, 1162
BsnI GGCC 1 cut(s) 372
BsoBI CYCGRG 2 cut(s) 491, 1179
Bsp119I TTCGAA 1 cut(s) 504
Bsp1286I GDGCHC 3 cut(s) 141, 366, 1041
Bsp13I TCCGGA 1 cut(s) 877
Bsp143I GATC 6 cut(s) 283, 607, 672, 1048, 1336, 1383
Bsp1720I GCTNAGC 1 cut(s) 1120
Bsp19I CCATGG 1 cut(s) 958
BspACI CCGC 2 cut(s) 323, 1334
BspANI GGCC 1 cut(s) 372
BspCNI CTCAG 3 cut(s) 156, 219, 1279
BspDI ATCGAT 2 cut(s) 1386, 1509
BspEI TCCGGA 1 cut(s) 877
BspFNI CGCG 1 cut(s) 845
BspHI TCATGA 2 cut(s) 862, 1372
BspLI GGNNCC 1 cut(s) 1279
BspPI GGATC 3 cut(s) 1056, 1344, 1391
BspT104I TTCGAA 1 cut(s) 504
BspT107I GGYRCC 1 cut(s) 1277
BsrDI GCAATG 1 cut(s) 268
BsrFI RCCGGY 1 cut(s) 1444
BsrI ACTGG 3 cut(s) 1050, 1316, 1385
BssAI RCCGGY 1 cut(s) 1444
BssECI CCNNGG 4 cut(s) 367, 958, 1180, 1467
BssMI GATC 6 cut(s) 283, 607, 672, 1048, 1336, 1383
BssSI CACGAG 1 cut(s) 236
BssT1I CCWWGG 1 cut(s) 958
Bst2BI CACGAG 1 cut(s) 236
Bst2UI CCWGG 2 cut(s) 369, 1468
Bst4CI ACNGT 3 cut(s) 304, 922, 1282
Bst6I CTCTTC 4 cut(s) 1076, 1286, 1412, 1454
BstBAI YACGTR 1 cut(s) 1155
BstBI TTCGAA 1 cut(s) 504
BstC8I GCNNGC 1 cut(s) 1126
BstDEI CTNAG 6 cut(s) 143, 206, 251, 1120, 1287, 1353
BstDSI CCRYGG 1 cut(s) 958
BstF5I GGATG 5 cut(s) 18, 183, 610, 622, 1003
BstFNI CGCG 1 cut(s) 845
BstHHI GCGC 1 cut(s) 1506
BstKTI GATC 6 cut(s) 286, 610, 675, 1051, 1339, 1386
BstMAI GTCTC 1 cut(s) 617
BstMBI GATC 6 cut(s) 283, 607, 672, 1048, 1336, 1383
BstMWI GCNNNNNNNGC 2 cut(s) 1125, 1430
BstNI CCWGG 2 cut(s) 369, 1468
BstNSI RCATGY 1 cut(s) 565
BstSCI CCNGG 2 cut(s) 367, 1466
BstSLI GKGCMC 1 cut(s) 1041
BstSNI TACGTA 1 cut(s) 1155
BstUI CGCG 1 cut(s) 845
BstV1I GCAGC 1 cut(s) 42
BstV2I GAAGAC 2 cut(s) 248, 1494
BstXI CCANNNNNNTGG 1 cut(s) 380
Bsu15I ATCGAT 2 cut(s) 1386, 1509
BsuI GTATCC 1 cut(s) 1359
BsuRI GGCC 1 cut(s) 372
BsuTUI ATCGAT 2 cut(s) 1386, 1509
BtgI CCRYGG 1 cut(s) 958
BtgZI GCGATG 1 cut(s) 291
BtsCI GGATG 5 cut(s) 18, 183, 610, 622, 1003
BtsIMutI CAGTG 1 cut(s) 927
Cac8I GCNNGC 1 cut(s) 1126
CciI TCATGA 2 cut(s) 862, 1372
CfoI GCGC 1 cut(s) 1506
Cfr10I RCCGGY 1 cut(s) 1444
Cfr13I GGNCC 1 cut(s) 310
ClaI ATCGAT 2 cut(s) 1386, 1509
CseI GACGC 5 cut(s) 76, 851, 910, 1125, 1195
Csp6I GTAC 5 cut(s) 300, 522, 654, 1278, 1318
CviAII CATG 7 cut(s) 498, 562, 863, 905, 959, 1169, 1373
CviQI GTAC 5 cut(s) 300, 522, 654, 1278, 1318
DdeI CTNAG 6 cut(s) 143, 206, 251, 1120, 1287, 1353
DpnI GATC 6 cut(s) 285, 609, 674, 1050, 1338, 1385
DpnII GATC 6 cut(s) 283, 607, 672, 1048, 1336, 1383
EaeI YGGCCR 1 cut(s) 370
Eam1104I CTCTTC 4 cut(s) 1076, 1286, 1412, 1454
EarI CTCTTC 4 cut(s) 1076, 1286, 1412, 1454
Ecl136II GAGCTC 1 cut(s) 364
Eco105I TACGTA 1 cut(s) 1155
Eco130I CCWWGG 1 cut(s) 958
Eco24I GRGCYC 1 cut(s) 366
Eco47I GGWCC 1 cut(s) 310
Eco53kI GAGCTC 1 cut(s) 364
Eco88I CYCGRG 2 cut(s) 491, 1179
EcoICRI GAGCTC 1 cut(s) 364
EcoO109I RGGNCCY 1 cut(s) 310
EcoRI GAATTC 1 cut(s) 218
EcoRII CCWGG 2 cut(s) 367, 1466
EcoT14I CCWWGG 1 cut(s) 958
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 1 cut(s) 958
Esp3I CGTCTC 1 cut(s) 617
FaeI CATG 7 cut(s) 501, 565, 866, 908, 962, 1172, 1376
FaqI GGGAC 4 cut(s) 363, 691, 1100, 1162
FatI CATG 7 cut(s) 497, 561, 862, 904, 958, 1168, 1372
FbaI TGATCA 1 cut(s) 283
FblI GTMKAC 1 cut(s) 731
Fnu4HI GCNGC 1 cut(s) 56
FokI GGATG 5 cut(s) 5, 170, 609, 617, 1010
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 1 cut(s) 56
FspAI RTGCGCAY 1 cut(s) 1505
FspBI CTAG 1 cut(s) 47
FspI TGCGCA 1 cut(s) 1505
GlaI GCGC 1 cut(s) 1505
GluI GCNGC 1 cut(s) 56
HaeIII GGCC 1 cut(s) 372
HapII CCGG 4 cut(s) 441, 464, 878, 1445
HgaI GACGC 5 cut(s) 76, 851, 910, 1125, 1195
HhaI GCGC 1 cut(s) 1506
Hin1II CATG 7 cut(s) 501, 565, 866, 908, 962, 1172, 1376
Hin6I GCGC 1 cut(s) 1504
HinP1I GCGC 1 cut(s) 1504
HincII GTYRAC 2 cut(s) 732, 1105
HindII GTYRAC 2 cut(s) 732, 1105
HinfI GANTC 6 cut(s) 78, 386, 494, 547, 932, 1545
HpaII CCGG 4 cut(s) 441, 464, 878, 1445
HphI GGTGA 5 cut(s) 395, 599, 974, 1003, 1411
Hpy166II GTNNAC 4 cut(s) 522, 732, 1105, 1318
Hpy188I TCNGA 2 cut(s) 546, 900
Hpy188III TCNNGA 7 cut(s) 491, 676, 863, 878, 1052, 1179, 1373
Hpy8I GTNNAC 4 cut(s) 522, 732, 1105, 1318
Hpy99I CGWCG 4 cut(s) 845, 904, 1211, 1439
HpyAV CCTTC 1 cut(s) 772
HpyCH4III ACNGT 3 cut(s) 304, 922, 1282
HpyCH4IV ACGT 2 cut(s) 524, 1154
HpyCH4V TGCA 4 cut(s) 15, 183, 1455, 1530
HpyF10VI GCNNNNNNNGC 2 cut(s) 1125, 1430
HpyF3I CTNAG 6 cut(s) 143, 206, 251, 1120, 1287, 1353
HpySE526I ACGT 2 cut(s) 524, 1154
Hsp92II CATG 7 cut(s) 501, 565, 866, 908, 962, 1172, 1376
HspAI GCGC 1 cut(s) 1504
Kpn2I TCCGGA 1 cut(s) 877
KpnI GGTACC 1 cut(s) 1281
Ksp22I TGATCA 1 cut(s) 283
Kzo9I GATC 6 cut(s) 283, 607, 672, 1048, 1336, 1383
LmnI GCTCC 1 cut(s) 369
Lsp1109I GCAGC 1 cut(s) 42
LweI GCATC 4 cut(s) 192, 499, 582, 1515
MaeI CTAG 1 cut(s) 47
MaeII ACGT 2 cut(s) 524, 1154
MaeIII GTNAC 3 cut(s) 716, 1282, 1555
MalI GATC 6 cut(s) 285, 609, 674, 1050, 1338, 1385
MboI GATC 6 cut(s) 283, 607, 672, 1048, 1336, 1383
MfeI CAATTG 1 cut(s) 824
MhlI GDGCHC 3 cut(s) 141, 366, 1041
MlsI TGGCCA 1 cut(s) 372
MluNI TGGCCA 1 cut(s) 372
MlyI GAGTC 2 cut(s) 503, 1554
MmeI TCCRAC 3 cut(s) 18, 923, 995
Mox20I TGGCCA 1 cut(s) 372
MroI TCCGGA 1 cut(s) 877
MroXI GAANNNNTTC 1 cut(s) 858
MscI TGGCCA 1 cut(s) 372
MseI TTAA 5 cut(s) 114, 338, 1070, 1541, 1567
MslI CAYNNNNRTG 1 cut(s) 411
Msp20I TGGCCA 1 cut(s) 372
MspA1I CMGCKG 1 cut(s) 1334
MspI CCGG 4 cut(s) 441, 464, 878, 1445
MspR9I CCNGG 2 cut(s) 369, 1468
MunI CAATTG 1 cut(s) 824
MvaI CCWGG 2 cut(s) 369, 1468
MvnI CGCG 1 cut(s) 845
MwoI GCNNNNNNNGC 2 cut(s) 1125, 1430
NcoI CCATGG 1 cut(s) 958
NdeII GATC 6 cut(s) 283, 607, 672, 1048, 1336, 1383
NlaIII CATG 7 cut(s) 501, 565, 866, 908, 962, 1172, 1376
NlaIV GGNNCC 1 cut(s) 1279
NmeAIII GCCGAG 1 cut(s) 160
NsbI TGCGCA 1 cut(s) 1505
NspI RCATGY 1 cut(s) 565
NspV TTCGAA 1 cut(s) 504
PagI TCATGA 2 cut(s) 862, 1372
PcsI WCGNNNNNNNCGW 1 cut(s) 234
PdmI GAANNNNTTC 1 cut(s) 858
PfeI GAWTC 4 cut(s) 78, 386, 547, 932
PkrI GCNGC 1 cut(s) 57
PleI GAGTC 2 cut(s) 502, 1553
PpsI GAGTC 2 cut(s) 502, 1553
Ppu21I YACGTR 1 cut(s) 1155
PpuMI RGGWCCY 1 cut(s) 310
PshBI ATTAAT 1 cut(s) 1070
Psp124BI GAGCTC 1 cut(s) 366
Psp5II RGGWCCY 1 cut(s) 310
Psp6I CCWGG 2 cut(s) 367, 1466
PspGI CCWGG 2 cut(s) 367, 1466
PspN4I GGNNCC 1 cut(s) 1279
PspPI GGNCC 1 cut(s) 310
PspPPI RGGWCCY 1 cut(s) 310
RsaI GTAC 5 cut(s) 301, 523, 655, 1279, 1319
RsaNI GTAC 5 cut(s) 300, 522, 654, 1278, 1318
RseI CAYNNNNRTG 1 cut(s) 411
SacI GAGCTC 1 cut(s) 366
SalI GTCGAC 1 cut(s) 730
SaqAI TTAA 5 cut(s) 114, 338, 1070, 1541, 1567
SatI GCNGC 1 cut(s) 56
Sau3AI GATC 6 cut(s) 283, 607, 672, 1048, 1336, 1383
Sau96I GGNCC 1 cut(s) 310
ScaI AGTACT 1 cut(s) 655
SchI GAGTC 2 cut(s) 503, 1554
ScrFI CCNGG 2 cut(s) 369, 1468
SduI GDGCHC 3 cut(s) 141, 366, 1041
SfaNI GCATC 4 cut(s) 192, 499, 582, 1515
SfuI TTCGAA 1 cut(s) 504
SinI GGWCC 1 cut(s) 310
SmiMI CAYNNNNRTG 1 cut(s) 411
SmlI CTYRAG 1 cut(s) 806
SmoI CTYRAG 1 cut(s) 806
SnaBI TACGTA 1 cut(s) 1155
SsiI CCGC 2 cut(s) 323, 1334
SspI AATATT 1 cut(s) 597
SspMI CTAG 1 cut(s) 47
SstI GAGCTC 1 cut(s) 366
StyD4I CCNGG 2 cut(s) 367, 1466
StyI CCWWGG 1 cut(s) 958
TaaI ACNGT 3 cut(s) 304, 922, 1282
TaiI ACGT 2 cut(s) 527, 1157
TaqI TCGA 8 cut(s) 504, 731, 741, 1209, 1245, 1386, 1473, 1509
TatI WGTACW 3 cut(s) 299, 653, 1317
TfiI GAWTC 4 cut(s) 78, 386, 547, 932
Tru1I TTAA 5 cut(s) 114, 338, 1070, 1541, 1567
Tru9I TTAA 5 cut(s) 114, 338, 1070, 1541, 1567
TscAI CASTG 1 cut(s) 927
TseI GCWGC 1 cut(s) 55
TspGWI ACGGA 3 cut(s) 80, 1021, 1452
TspRI CASTG 1 cut(s) 927
VpaK11BI GGWCC 1 cut(s) 310
VspI ATTAAT 1 cut(s) 1070
XapI RAATTY 5 cut(s) 218, 476, 782, 984, 1001
XceI RCATGY 1 cut(s) 565
XcmI CCANNNNNNNNNTGG 1 cut(s) 1074
XmiI GTMKAC 1 cut(s) 731
XmnI GAANNNNTTC 1 cut(s) 858
XspI CTAG 1 cut(s) 47
ZrmI AGTACT 1 cut(s) 655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.