Cyclic phosphodiesterase-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 75 |
| AciI | CCGC | 1 cut(s) | 526 |
| AclWI | GGATC | 3 cut(s) | 235, 357, 366 |
| AcsI | RAATTY | 1 cut(s) | 272 |
| AfaI | GTAC | 1 cut(s) | 107 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 223, 224, 387 |
| AgsI | TTSAA | 1 cut(s) | 374 |
| AjnI | CCWGG | 1 cut(s) | 177 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 198, 230 |
| AluBI | AGCT | 5 cut(s) | 19, 93, 393, 476, 516 |
| AluI | AGCT | 5 cut(s) | 19, 93, 393, 476, 516 |
| Alw26I | GTCTC | 1 cut(s) | 440 |
| AlwI | GGATC | 3 cut(s) | 235, 357, 366 |
| AoxI | GGCC | 3 cut(s) | 123, 172, 194 |
| ApeKI | GCWGC | 2 cut(s) | 9, 93 |
| ApoI | RAATTY | 1 cut(s) | 272 |
| AspS9I | GGNCC | 4 cut(s) | 123, 172, 194, 585 |
| AsuHPI | GGTGA | 1 cut(s) | 175 |
| AvaII | GGWCC | 1 cut(s) | 585 |
| BbvI | GCAGC | 2 cut(s) | 21, 80 |
| BccI | CCATC | 4 cut(s) | 58, 160, 227, 349 |
| BciT130I | CCWGG | 1 cut(s) | 179 |
| BcoDI | GTCTC | 1 cut(s) | 440 |
| BfaI | CTAG | 1 cut(s) | 513 |
| BglII | AGATCT | 1 cut(s) | 569 |
| BisI | GCNGC | 2 cut(s) | 10, 94 |
| BlsI | GCNGC | 2 cut(s) | 11, 95 |
| Bme1390I | CCNGG | 1 cut(s) | 179 |
| Bme18I | GGWCC | 1 cut(s) | 585 |
| BmgT120I | GGNCC | 4 cut(s) | 123, 172, 194, 585 |
| BmrFI | CCNGG | 1 cut(s) | 179 |
| BmsI | GCATC | 2 cut(s) | 49, 244 |
| BpmI | CTGGAG | 2 cut(s) | 161, 498 |
| Bsa29I | ATCGAT | 1 cut(s) | 361 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 471, 501 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 223, 224, 387 |
| Bse118I | RCCGGY | 1 cut(s) | 133 |
| BseBI | CCWGG | 1 cut(s) | 179 |
| BseCI | ATCGAT | 1 cut(s) | 361 |
| BseGI | GGATG | 3 cut(s) | 213, 259, 292 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 223, 224, 387 |
| BseMII | CTCAG | 1 cut(s) | 57 |
| BseRI | GAGGAG | 1 cut(s) | 428 |
| BseXI | GCAGC | 2 cut(s) | 21, 80 |
| Bsh1285I | CGRYCG | 1 cut(s) | 607 |
| BshFI | GGCC | 3 cut(s) | 125, 174, 196 |
| BshVI | ATCGAT | 1 cut(s) | 361 |
| BsiEI | CGRYCG | 1 cut(s) | 607 |
| BsiSI | CCGG | 3 cut(s) | 97, 134, 197 |
| BslFI | GGGAC | 1 cut(s) | 18 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 223, 224, 387 |
| BsmAI | GTCTC | 1 cut(s) | 440 |
| BsmFI | GGGAC | 1 cut(s) | 18 |
| BsnI | GGCC | 3 cut(s) | 125, 174, 196 |
| Bsp143I | GATC | 6 cut(s) | 201, 227, 307, 358, 362, 569 |
| BspACI | CCGC | 1 cut(s) | 526 |
| BspANI | GGCC | 3 cut(s) | 125, 174, 196 |
| BspCNI | CTCAG | 1 cut(s) | 56 |
| BspDI | ATCGAT | 1 cut(s) | 361 |
| BspPI | GGATC | 3 cut(s) | 235, 357, 366 |
| BsrFI | RCCGGY | 1 cut(s) | 133 |
| BssAI | RCCGGY | 1 cut(s) | 133 |
| BssMI | GATC | 6 cut(s) | 201, 227, 307, 358, 362, 569 |
| Bst2UI | CCWGG | 1 cut(s) | 179 |
| Bst4CI | ACNGT | 1 cut(s) | 416 |
| Bst6I | CTCTTC | 1 cut(s) | 77 |
| BstDEI | CTNAG | 2 cut(s) | 43, 321 |
| BstF5I | GGATG | 3 cut(s) | 213, 259, 292 |
| BstKTI | GATC | 6 cut(s) | 204, 230, 310, 361, 365, 572 |
| BstMAI | GTCTC | 1 cut(s) | 440 |
| BstMBI | GATC | 6 cut(s) | 201, 227, 307, 358, 362, 569 |
| BstMCI | CGRYCG | 1 cut(s) | 607 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 513 |
| BstNI | CCWGG | 1 cut(s) | 179 |
| BstSCI | CCNGG | 1 cut(s) | 177 |
| BstV1I | GCAGC | 2 cut(s) | 21, 80 |
| BstX2I | RGATCY | 2 cut(s) | 227, 569 |
| BstYI | RGATCY | 2 cut(s) | 227, 569 |
| Bsu15I | ATCGAT | 1 cut(s) | 361 |
| BsuRI | GGCC | 3 cut(s) | 125, 174, 196 |
| BsuTUI | ATCGAT | 1 cut(s) | 361 |
| BtgZI | GCGATG | 1 cut(s) | 77 |
| BtsCI | GGATG | 3 cut(s) | 213, 259, 292 |
| BtsIMutI | CAGTG | 1 cut(s) | 344 |
| Cfr10I | RCCGGY | 1 cut(s) | 133 |
| Cfr13I | GGNCC | 4 cut(s) | 123, 172, 194, 585 |
| ClaI | ATCGAT | 1 cut(s) | 361 |
| CseI | GACGC | 1 cut(s) | 15 |
| Csp6I | GTAC | 1 cut(s) | 106 |
| CviQI | GTAC | 1 cut(s) | 106 |
| DdeI | CTNAG | 2 cut(s) | 43, 321 |
| DpnI | GATC | 6 cut(s) | 203, 229, 309, 360, 364, 571 |
| DpnII | GATC | 6 cut(s) | 201, 227, 307, 358, 362, 569 |
| DraI | TTTAAA | 1 cut(s) | 271 |
| Eam1104I | CTCTTC | 1 cut(s) | 77 |
| EarI | CTCTTC | 1 cut(s) | 77 |
| Eco47I | GGWCC | 1 cut(s) | 585 |
| EcoO109I | RGGNCCY | 1 cut(s) | 172 |
| EcoRII | CCWGG | 1 cut(s) | 177 |
| FaiI | YATR | 7 cut(s) | 29, 150, 284, 422, 427, 530, 549 |
| FaqI | GGGAC | 1 cut(s) | 18 |
| FblI | GTMKAC | 1 cut(s) | 75 |
| Fnu4HI | GCNGC | 2 cut(s) | 10, 94 |
| FokI | GGATG | 3 cut(s) | 200, 266, 299 |
| Fsp4HI | GCNGC | 2 cut(s) | 10, 94 |
| FspBI | CTAG | 1 cut(s) | 513 |
| GluI | GCNGC | 2 cut(s) | 10, 94 |
| GsuI | CTGGAG | 2 cut(s) | 161, 498 |
| HaeIII | GGCC | 3 cut(s) | 125, 174, 196 |
| HapII | CCGG | 3 cut(s) | 97, 134, 197 |
| HgaI | GACGC | 1 cut(s) | 15 |
| HincII | GTYRAC | 1 cut(s) | 453 |
| HindII | GTYRAC | 1 cut(s) | 453 |
| HindIII | AAGCTT | 1 cut(s) | 17 |
| HinfI | GANTC | 3 cut(s) | 153, 244, 433 |
| HpaII | CCGG | 3 cut(s) | 97, 134, 197 |
| HphI | GGTGA | 1 cut(s) | 175 |
| Hpy166II | GTNNAC | 2 cut(s) | 76, 453 |
| Hpy188I | TCNGA | 2 cut(s) | 46, 576 |
| Hpy188III | TCNNGA | 4 cut(s) | 157, 235, 248, 497 |
| Hpy8I | GTNNAC | 2 cut(s) | 76, 453 |
| Hpy99I | CGWCG | 1 cut(s) | 503 |
| HpyAV | CCTTC | 2 cut(s) | 154, 532 |
| HpyCH4III | ACNGT | 1 cut(s) | 416 |
| HpyCH4V | TGCA | 1 cut(s) | 542 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 513 |
| HpyF3I | CTNAG | 2 cut(s) | 43, 321 |
| Kzo9I | GATC | 6 cut(s) | 201, 227, 307, 358, 362, 569 |
| LmnI | GCTCC | 2 cut(s) | 283, 390 |
| LpnPI | CCDG | 7 cut(s) | 110, 147, 164, 191, 210, 248, 462 |
| Lsp1109I | GCAGC | 2 cut(s) | 21, 80 |
| LweI | GCATC | 2 cut(s) | 49, 244 |
| MaeI | CTAG | 1 cut(s) | 513 |
| MaeIII | GTNAC | 1 cut(s) | 316 |
| MalI | GATC | 6 cut(s) | 203, 229, 309, 360, 364, 571 |
| MboI | GATC | 6 cut(s) | 201, 227, 307, 358, 362, 569 |
| MboII | GAAGA | 4 cut(s) | 68, 94, 470, 473 |
| MflI | RGATCY | 2 cut(s) | 227, 569 |
| MluCI | AATT | 4 cut(s) | 272, 325, 483, 552 |
| MlyI | GAGTC | 2 cut(s) | 253, 442 |
| MmeI | TCCRAC | 1 cut(s) | 368 |
| MnlI | CCTC | 7 cut(s) | 78, 93, 163, 185, 219, 244, 449 |
| MseI | TTAA | 4 cut(s) | 261, 270, 300, 489 |
| MslI | CAYNNNNRTG | 1 cut(s) | 339 |
| MspI | CCGG | 3 cut(s) | 97, 134, 197 |
| MspR9I | CCNGG | 1 cut(s) | 179 |
| MvaI | CCWGG | 1 cut(s) | 179 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 513 |
| NdeII | GATC | 6 cut(s) | 201, 227, 307, 358, 362, 569 |
| PfeI | GAWTC | 1 cut(s) | 153 |
| PkrI | GCNGC | 2 cut(s) | 11, 95 |
| PleI | GAGTC | 2 cut(s) | 252, 441 |
| PpsI | GAGTC | 2 cut(s) | 252, 441 |
| Psp6I | CCWGG | 1 cut(s) | 177 |
| PspGI | CCWGG | 1 cut(s) | 177 |
| PspPI | GGNCC | 4 cut(s) | 123, 172, 194, 585 |
| PsuI | RGATCY | 2 cut(s) | 227, 569 |
| RsaI | GTAC | 1 cut(s) | 107 |
| RsaNI | GTAC | 1 cut(s) | 106 |
| RseI | CAYNNNNRTG | 1 cut(s) | 339 |
| SaqAI | TTAA | 4 cut(s) | 261, 270, 300, 489 |
| SatI | GCNGC | 2 cut(s) | 10, 94 |
| Sau3AI | GATC | 6 cut(s) | 201, 227, 307, 358, 362, 569 |
| Sau96I | GGNCC | 4 cut(s) | 123, 172, 194, 585 |
| SchI | GAGTC | 2 cut(s) | 253, 442 |
| ScrFI | CCNGG | 1 cut(s) | 179 |
| SetI | ASST | 9 cut(s) | 21, 95, 104, 165, 211, 395, 478, 518, 524 |
| SfaNI | GCATC | 2 cut(s) | 49, 244 |
| SinI | GGWCC | 1 cut(s) | 585 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 339 |
| Sse9I | AATT | 4 cut(s) | 272, 325, 483, 552 |
| SsiI | CCGC | 1 cut(s) | 526 |
| SspI | AATATT | 1 cut(s) | 493 |
| SspMI | CTAG | 1 cut(s) | 513 |
| StyD4I | CCNGG | 1 cut(s) | 177 |
| TaaI | ACNGT | 1 cut(s) | 416 |
| TaqI | TCGA | 3 cut(s) | 204, 361, 498 |
| TaqII | GACCGA | 1 cut(s) | 593 |
| TasI | AATT | 4 cut(s) | 272, 325, 483, 552 |
| TfiI | GAWTC | 1 cut(s) | 153 |
| Tru1I | TTAA | 4 cut(s) | 261, 270, 300, 489 |
| Tru9I | TTAA | 4 cut(s) | 261, 270, 300, 489 |
| TscAI | CASTG | 1 cut(s) | 344 |
| TseI | GCWGC | 2 cut(s) | 9, 93 |
| TspDTI | ATGAA | 2 cut(s) | 69, 564 |
| TspGWI | ACGGA | 1 cut(s) | 470 |
| TspRI | CASTG | 1 cut(s) | 344 |
| VpaK11BI | GGWCC | 1 cut(s) | 585 |
| XapI | RAATTY | 1 cut(s) | 272 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 185 |
| XmiI | GTMKAC | 1 cut(s) | 75 |
| XspI | CTAG | 1 cut(s) | 513 |