Class S F-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FBA_3 | PF08268 | 110 - 270 | 3.7e-12 | F-box associated beta propeller domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 398 |
| AciI | CCGC | 1 cut(s) | 23 |
| AcsI | RAATTY | 5 cut(s) | 164, 237, 279, 479, 786 |
| AcvI | CACGTG | 1 cut(s) | 180 |
| AfaI | GTAC | 6 cut(s) | 39, 104, 692, 735, 745, 776 |
| AgsI | TTSAA | 5 cut(s) | 82, 471, 484, 678, 781 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 778, 810 |
| AluBI | AGCT | 3 cut(s) | 334, 611, 810 |
| AluI | AGCT | 3 cut(s) | 334, 611, 810 |
| ApeKI | GCWGC | 1 cut(s) | 274 |
| ApoI | RAATTY | 5 cut(s) | 164, 237, 279, 479, 786 |
| AsuHPI | GGTGA | 2 cut(s) | 160, 332 |
| AxyI | CCTNAGG | 1 cut(s) | 697 |
| BbrPI | CACGTG | 1 cut(s) | 180 |
| BbsI | GAAGAC | 1 cut(s) | 497 |
| BbvI | GCAGC | 1 cut(s) | 286 |
| BccI | CCATC | 1 cut(s) | 413 |
| BceAI | ACGGC | 1 cut(s) | 853 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 434, 468 |
| BclI | TGATCA | 1 cut(s) | 325 |
| BfaI | CTAG | 1 cut(s) | 822 |
| BfuAI | ACCTGC | 1 cut(s) | 398 |
| BisI | GCNGC | 1 cut(s) | 275 |
| BlsI | GCNGC | 1 cut(s) | 276 |
| BmcAI | AGTACT | 1 cut(s) | 745 |
| BmrI | ACTGGG | 1 cut(s) | 535 |
| BmsI | GCATC | 3 cut(s) | 63, 192, 790 |
| BmuI | ACTGGG | 1 cut(s) | 535 |
| BpiI | GAAGAC | 1 cut(s) | 497 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 43, 75 |
| BpuEI | CTTGAG | 1 cut(s) | 191 |
| BsaAI | YACGTR | 2 cut(s) | 180, 255 |
| Bse1I | ACTGG | 2 cut(s) | 530, 640 |
| Bse21I | CCTNAGG | 1 cut(s) | 697 |
| BseGI | GGATG | 4 cut(s) | 183, 535, 670, 805 |
| BseMII | CTCAG | 1 cut(s) | 149 |
| BseNI | ACTGG | 2 cut(s) | 530, 640 |
| BseXI | GCAGC | 1 cut(s) | 286 |
| Bsp1407I | TGTACA | 1 cut(s) | 690 |
| Bsp143I | GATC | 3 cut(s) | 310, 325, 720 |
| BspACI | CCGC | 1 cut(s) | 23 |
| BspCNI | CTCAG | 1 cut(s) | 148 |
| BspMI | ACCTGC | 1 cut(s) | 398 |
| BsrGI | TGTACA | 1 cut(s) | 690 |
| BsrI | ACTGG | 2 cut(s) | 530, 640 |
| BssMI | GATC | 3 cut(s) | 310, 325, 720 |
| Bst4CI | ACNGT | 5 cut(s) | 202, 215, 288, 748, 828 |
| Bst6I | CTCTTC | 2 cut(s) | 21, 178 |
| BstAUI | TGTACA | 1 cut(s) | 690 |
| BstBAI | YACGTR | 2 cut(s) | 180, 255 |
| BstDEI | CTNAG | 2 cut(s) | 135, 697 |
| BstF5I | GGATG | 4 cut(s) | 183, 535, 670, 805 |
| BstKTI | GATC | 3 cut(s) | 313, 328, 723 |
| BstMBI | GATC | 3 cut(s) | 310, 325, 720 |
| BstSNI | TACGTA | 1 cut(s) | 255 |
| BstV1I | GCAGC | 1 cut(s) | 286 |
| BstV2I | GAAGAC | 1 cut(s) | 497 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 525 |
| Bsu36I | CCTNAGG | 1 cut(s) | 697 |
| BtgZI | GCGATG | 1 cut(s) | 276 |
| BtsCI | GGATG | 4 cut(s) | 183, 535, 670, 805 |
| BveI | ACCTGC | 1 cut(s) | 398 |
| Csp6I | GTAC | 6 cut(s) | 38, 103, 691, 734, 744, 775 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 111, 146, 567, 602 |
| CviAII | CATG | 3 cut(s) | 46, 99, 154 |
| CviJI | RGCY | 5 cut(s) | 134, 334, 597, 611, 810 |
| CviKI_1 | RGCY | 5 cut(s) | 134, 334, 597, 611, 810 |
| CviQI | GTAC | 6 cut(s) | 38, 103, 691, 734, 744, 775 |
| DdeI | CTNAG | 2 cut(s) | 135, 697 |
| DpnI | GATC | 3 cut(s) | 312, 327, 722 |
| DpnII | GATC | 3 cut(s) | 310, 325, 720 |
| DraI | TTTAAA | 1 cut(s) | 399 |
| Eam1104I | CTCTTC | 2 cut(s) | 21, 178 |
| EarI | CTCTTC | 2 cut(s) | 21, 178 |
| EciI | GGCGGA | 1 cut(s) | 38 |
| Eco105I | TACGTA | 1 cut(s) | 255 |
| Eco32I | GATATC | 1 cut(s) | 247 |
| Eco72I | CACGTG | 1 cut(s) | 180 |
| Eco81I | CCTNAGG | 1 cut(s) | 697 |
| EcoRI | GAATTC | 1 cut(s) | 479 |
| EcoRV | GATATC | 1 cut(s) | 247 |
| FaeI | CATG | 3 cut(s) | 49, 102, 157 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 341, 373 |
| FatI | CATG | 3 cut(s) | 45, 98, 153 |
| FbaI | TGATCA | 1 cut(s) | 325 |
| Fnu4HI | GCNGC | 1 cut(s) | 275 |
| FokI | GGATG | 4 cut(s) | 170, 542, 657, 812 |
| Fsp4HI | GCNGC | 1 cut(s) | 275 |
| FspBI | CTAG | 1 cut(s) | 822 |
| GluI | GCNGC | 1 cut(s) | 275 |
| Hin1II | CATG | 3 cut(s) | 49, 102, 157 |
| HincII | GTYRAC | 1 cut(s) | 439 |
| HindII | GTYRAC | 1 cut(s) | 439 |
| HinfI | GANTC | 6 cut(s) | 78, 139, 569, 575, 602, 757 |
| HpaI | GTTAAC | 1 cut(s) | 439 |
| HphI | GGTGA | 2 cut(s) | 160, 332 |
| Hpy166II | GTNNAC | 4 cut(s) | 439, 619, 691, 693 |
| Hpy188I | TCNGA | 2 cut(s) | 138, 574 |
| Hpy188III | TCNNGA | 3 cut(s) | 242, 329, 678 |
| Hpy8I | GTNNAC | 4 cut(s) | 439, 619, 691, 693 |
| Hpy99I | CGWCG | 1 cut(s) | 446 |
| HpyAV | CCTTC | 3 cut(s) | 477, 684, 771 |
| HpyCH4III | ACNGT | 5 cut(s) | 202, 215, 288, 748, 828 |
| HpyCH4IV | ACGT | 3 cut(s) | 179, 254, 441 |
| HpyCH4V | TGCA | 6 cut(s) | 7, 183, 306, 407, 462, 848 |
| HpyF3I | CTNAG | 2 cut(s) | 135, 697 |
| HpySE526I | ACGT | 3 cut(s) | 179, 254, 441 |
| Hsp92II | CATG | 3 cut(s) | 49, 102, 157 |
| Ksp22I | TGATCA | 1 cut(s) | 325 |
| KspAI | GTTAAC | 1 cut(s) | 439 |
| Kzo9I | GATC | 3 cut(s) | 310, 325, 720 |
| LpnPI | CCDG | 4 cut(s) | 393, 511, 636, 653 |
| Lsp1109I | GCAGC | 1 cut(s) | 286 |
| LweI | GCATC | 3 cut(s) | 63, 192, 790 |
| MaeI | CTAG | 1 cut(s) | 822 |
| MaeII | ACGT | 3 cut(s) | 179, 254, 441 |
| MaeIII | GTNAC | 1 cut(s) | 215 |
| MalI | GATC | 3 cut(s) | 312, 327, 722 |
| MboI | GATC | 3 cut(s) | 310, 325, 720 |
| MboII | GAAGA | 8 cut(s) | 3, 38, 165, 458, 482, 497, 500, 557 |
| MlyI | GAGTC | 1 cut(s) | 766 |
| MmeI | TCCRAC | 2 cut(s) | 692, 734 |
| MnlI | CCTC | 6 cut(s) | 45, 69, 181, 197, 215, 553 |
| MseI | TTAA | 4 cut(s) | 297, 348, 398, 438 |
| MslI | CAYNNNNRTG | 3 cut(s) | 318, 417, 853 |
| NdeII | GATC | 3 cut(s) | 310, 325, 720 |
| NlaIII | CATG | 3 cut(s) | 49, 102, 157 |
| PfeI | GAWTC | 5 cut(s) | 78, 139, 569, 575, 602 |
| PkrI | GCNGC | 1 cut(s) | 276 |
| PleI | GAGTC | 1 cut(s) | 765 |
| PmaCI | CACGTG | 1 cut(s) | 180 |
| PmlI | CACGTG | 1 cut(s) | 180 |
| PpsI | GAGTC | 1 cut(s) | 765 |
| Ppu21I | YACGTR | 2 cut(s) | 180, 255 |
| PspCI | CACGTG | 1 cut(s) | 180 |
| RsaI | GTAC | 6 cut(s) | 39, 104, 692, 735, 745, 776 |
| RsaNI | GTAC | 6 cut(s) | 38, 103, 691, 734, 744, 775 |
| RseI | CAYNNNNRTG | 3 cut(s) | 318, 417, 853 |
| SaqAI | TTAA | 4 cut(s) | 297, 348, 398, 438 |
| SatI | GCNGC | 1 cut(s) | 275 |
| Sau3AI | GATC | 3 cut(s) | 310, 325, 720 |
| ScaI | AGTACT | 1 cut(s) | 745 |
| SchI | GAGTC | 1 cut(s) | 766 |
| SfaNI | GCATC | 3 cut(s) | 63, 192, 790 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 318, 417, 853 |
| SmlI | CTYRAG | 1 cut(s) | 206 |
| SmoI | CTYRAG | 1 cut(s) | 206 |
| SnaBI | TACGTA | 1 cut(s) | 255 |
| SsiI | CCGC | 1 cut(s) | 23 |
| SspMI | CTAG | 1 cut(s) | 822 |
| TaaI | ACNGT | 5 cut(s) | 202, 215, 288, 748, 828 |
| TaiI | ACGT | 3 cut(s) | 182, 257, 444 |
| TaqI | TCGA | 2 cut(s) | 50, 444 |
| TatI | WGTACW | 4 cut(s) | 690, 733, 743, 774 |
| TfiI | GAWTC | 5 cut(s) | 78, 139, 569, 575, 602 |
| Tru1I | TTAA | 4 cut(s) | 297, 348, 398, 438 |
| Tru9I | TTAA | 4 cut(s) | 297, 348, 398, 438 |
| TseI | GCWGC | 1 cut(s) | 274 |
| TspDTI | ATGAA | 6 cut(s) | 34, 170, 249, 552, 558, 753 |
| XapI | RAATTY | 5 cut(s) | 164, 237, 279, 479, 786 |
| XspI | CTAG | 1 cut(s) | 822 |
| ZrmI | AGTACT | 1 cut(s) | 745 |