Class S F-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 701, 1166 |
| AccI | GTMKAC | 1 cut(s) | 947 |
| AclWI | GGATC | 2 cut(s) | 305, 431 |
| AcsI | RAATTY | 3 cut(s) | 148, 164, 482 |
| AfaI | GTAC | 5 cut(s) | 104, 632, 643, 716, 1250 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 21, 701, 806, 1166 |
| AgsI | TTSAA | 7 cut(s) | 82, 147, 474, 721, 1012, 1052, 1202 |
| AjnI | CCWGG | 1 cut(s) | 700 |
| AluBI | AGCT | 4 cut(s) | 10, 334, 358, 569 |
| AluI | AGCT | 4 cut(s) | 10, 334, 358, 569 |
| Alw21I | GWGCWC | 1 cut(s) | 360 |
| Alw26I | GTCTC | 3 cut(s) | 764, 954, 1160 |
| AlwI | GGATC | 2 cut(s) | 305, 431 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 701 |
| AoxI | GGCC | 1 cut(s) | 132 |
| ApeKI | GCWGC | 1 cut(s) | 7 |
| ApoI | RAATTY | 3 cut(s) | 148, 164, 482 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 394, 426 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 930 |
| AspLEI | GCGC | 1 cut(s) | 7 |
| AspS9I | GGNCC | 2 cut(s) | 133, 688 |
| AsuC2I | CCSGG | 1 cut(s) | 515 |
| AvaII | GGWCC | 1 cut(s) | 688 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 441, 474 |
| BanII | GRGCYC | 1 cut(s) | 360 |
| BbsI | GAAGAC | 3 cut(s) | 500, 528, 1002 |
| Bbv12I | GWGCWC | 1 cut(s) | 360 |
| BbvI | GCAGC | 1 cut(s) | 19 |
| BccI | CCATC | 4 cut(s) | 25, 311, 437, 1103 |
| BceAI | ACGGC | 1 cut(s) | 389 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 66, 100 |
| BciT130I | CCWGG | 1 cut(s) | 702 |
| BciVI | GTATCC | 3 cut(s) | 442, 880, 1106 |
| BcnI | CCSGG | 1 cut(s) | 515 |
| BcoDI | GTCTC | 3 cut(s) | 764, 954, 1160 |
| BfaI | CTAG | 2 cut(s) | 1133, 1182 |
| BfuI | GTATCC | 3 cut(s) | 442, 880, 1106 |
| BisI | GCNGC | 1 cut(s) | 8 |
| BlsI | GCNGC | 1 cut(s) | 9 |
| BmcAI | AGTACT | 1 cut(s) | 716 |
| Bme1390I | CCNGG | 2 cut(s) | 515, 702 |
| Bme18I | GGWCC | 1 cut(s) | 688 |
| BmgT120I | GGNCC | 2 cut(s) | 133, 688 |
| BmiI | GGNNCC | 1 cut(s) | 908 |
| BmrFI | CCNGG | 2 cut(s) | 515, 702 |
| BmsI | GCATC | 2 cut(s) | 192, 1093 |
| BpiI | GAAGAC | 3 cut(s) | 500, 528, 1002 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 43, 75 |
| Bpu10I | CCTNAGC | 1 cut(s) | 570 |
| BpuEI | CTTGAG | 1 cut(s) | 1133 |
| BpuMI | CCSGG | 1 cut(s) | 515 |
| BsaAI | YACGTR | 1 cut(s) | 945 |
| BsaWI | WCCGGW | 1 cut(s) | 877 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 21, 701, 806, 1166 |
| Bse3DI | GCAATG | 1 cut(s) | 186 |
| BseBI | CCWGG | 1 cut(s) | 702 |
| BseGI | GGATG | 1 cut(s) | 523 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 21, 701, 806, 1166 |
| BseMI | GCAATG | 1 cut(s) | 186 |
| BseRI | GAGGAG | 1 cut(s) | 896 |
| BseXI | GCAGC | 1 cut(s) | 19 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1145 |
| BshFI | GGCC | 1 cut(s) | 134 |
| BsiEI | CGRYCG | 1 cut(s) | 1145 |
| BsiHKAI | GWGCWC | 1 cut(s) | 360 |
| BsiSI | CCGG | 2 cut(s) | 515, 878 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 21, 701, 806, 1166 |
| BsmAI | GTCTC | 3 cut(s) | 764, 954, 1160 |
| BsmBI | CGTCTC | 1 cut(s) | 954 |
| BsmI | GAATGC | 2 cut(s) | 87, 745 |
| BsnI | GGCC | 1 cut(s) | 134 |
| Bsp1286I | GDGCHC | 1 cut(s) | 360 |
| Bsp143I | GATC | 6 cut(s) | 310, 423, 487, 660, 1142, 1242 |
| BspANI | GGCC | 1 cut(s) | 134 |
| BspLI | GGNNCC | 1 cut(s) | 908 |
| BspPI | GGATC | 2 cut(s) | 305, 431 |
| BsrDI | GCAATG | 1 cut(s) | 186 |
| BssMI | GATC | 6 cut(s) | 310, 423, 487, 660, 1142, 1242 |
| BssNAI | GTATAC | 1 cut(s) | 948 |
| Bst1107I | GTATAC | 1 cut(s) | 948 |
| Bst2UI | CCWGG | 1 cut(s) | 702 |
| Bst4CI | ACNGT | 3 cut(s) | 119, 457, 527 |
| Bst6I | CTCTTC | 4 cut(s) | 21, 178, 264, 1073 |
| BstBAI | YACGTR | 1 cut(s) | 945 |
| BstDEI | CTNAG | 5 cut(s) | 296, 434, 570, 596, 1263 |
| BstF5I | GGATG | 1 cut(s) | 523 |
| BstHHI | GCGC | 1 cut(s) | 7 |
| BstKTI | GATC | 6 cut(s) | 313, 426, 490, 663, 1145, 1245 |
| BstMAI | GTCTC | 3 cut(s) | 764, 954, 1160 |
| BstMBI | GATC | 6 cut(s) | 310, 423, 487, 660, 1142, 1242 |
| BstMCI | CGRYCG | 1 cut(s) | 1145 |
| BstNI | CCWGG | 1 cut(s) | 702 |
| BstSCI | CCNGG | 2 cut(s) | 513, 700 |
| BstV1I | GCAGC | 1 cut(s) | 19 |
| BstV2I | GAAGAC | 3 cut(s) | 500, 528, 1002 |
| BstZ17I | GTATAC | 1 cut(s) | 948 |
| BsuI | GTATCC | 3 cut(s) | 442, 880, 1106 |
| BsuRI | GGCC | 1 cut(s) | 134 |
| BtgZI | GCGATG | 3 cut(s) | 321, 336, 456 |
| BtsCI | GGATG | 1 cut(s) | 523 |
| CaiI | CAGNNNCTG | 1 cut(s) | 701 |
| CfoI | GCGC | 1 cut(s) | 7 |
| Cfr13I | GGNCC | 2 cut(s) | 133, 688 |
| CseI | GACGC | 1 cut(s) | 971 |
| CsiI | ACCWGGT | 1 cut(s) | 700 |
| Csp6I | GTAC | 5 cut(s) | 103, 631, 642, 715, 1249 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 111, 146, 525, 560 |
| CviAII | CATG | 5 cut(s) | 99, 154, 257, 1020, 1166 |
| CviJI | RGCY | 9 cut(s) | 10, 134, 334, 358, 376, 569, 811, 909, 1235 |
| CviKI_1 | RGCY | 9 cut(s) | 10, 134, 334, 358, 376, 569, 811, 909, 1235 |
| CviQI | GTAC | 5 cut(s) | 103, 631, 642, 715, 1249 |
| DdeI | CTNAG | 5 cut(s) | 296, 434, 570, 596, 1263 |
| DpnI | GATC | 6 cut(s) | 312, 425, 489, 662, 1144, 1244 |
| DpnII | GATC | 6 cut(s) | 310, 423, 487, 660, 1142, 1242 |
| DraI | TTTAAA | 1 cut(s) | 618 |
| Eam1104I | CTCTTC | 4 cut(s) | 21, 178, 264, 1073 |
| EarI | CTCTTC | 4 cut(s) | 21, 178, 264, 1073 |
| Ecl136II | GAGCTC | 1 cut(s) | 358 |
| Eco24I | GRGCYC | 1 cut(s) | 360 |
| Eco32I | GATATC | 1 cut(s) | 870 |
| Eco47I | GGWCC | 1 cut(s) | 688 |
| Eco53kI | GAGCTC | 1 cut(s) | 358 |
| EcoICRI | GAGCTC | 1 cut(s) | 358 |
| EcoO109I | RGGNCCY | 1 cut(s) | 688 |
| EcoRI | GAATTC | 1 cut(s) | 482 |
| EcoRII | CCWGG | 1 cut(s) | 700 |
| EcoRV | GATATC | 1 cut(s) | 870 |
| EcoT22I | ATGCAT | 2 cut(s) | 89, 258 |
| EcoT38I | GRGCYC | 1 cut(s) | 360 |
| Esp3I | CGTCTC | 1 cut(s) | 954 |
| FaeI | CATG | 5 cut(s) | 102, 157, 260, 1023, 1169 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 780, 812, 915, 947 |
| FatI | CATG | 5 cut(s) | 98, 153, 256, 1019, 1165 |
| FauNDI | CATATG | 1 cut(s) | 983 |
| FblI | GTMKAC | 1 cut(s) | 947 |
| Fnu4HI | GCNGC | 1 cut(s) | 8 |
| FokI | GGATG | 1 cut(s) | 530 |
| FriOI | GRGCYC | 1 cut(s) | 360 |
| Fsp4HI | GCNGC | 1 cut(s) | 8 |
| FspBI | CTAG | 2 cut(s) | 1133, 1182 |
| GlaI | GCGC | 1 cut(s) | 6 |
| GluI | GCNGC | 1 cut(s) | 8 |
| HaeIII | GGCC | 1 cut(s) | 134 |
| HapII | CCGG | 2 cut(s) | 515, 878 |
| HgaI | GACGC | 1 cut(s) | 971 |
| HhaI | GCGC | 1 cut(s) | 7 |
| Hin1II | CATG | 5 cut(s) | 102, 157, 260, 1023, 1169 |
| Hin6I | GCGC | 1 cut(s) | 5 |
| HinP1I | GCGC | 1 cut(s) | 5 |
| HinfI | GANTC | 5 cut(s) | 78, 139, 560, 926, 1090 |
| HpaII | CCGG | 2 cut(s) | 515, 878 |
| Hpy166II | GTNNAC | 5 cut(s) | 577, 631, 752, 948, 1228 |
| Hpy188I | TCNGA | 2 cut(s) | 498, 763 |
| Hpy188III | TCNNGA | 4 cut(s) | 51, 314, 399, 1133 |
| Hpy8I | GTNNAC | 5 cut(s) | 577, 631, 752, 948, 1228 |
| HpyAV | CCTTC | 5 cut(s) | 226, 378, 480, 806, 941 |
| HpyCH4III | ACNGT | 3 cut(s) | 119, 457, 527 |
| HpyCH4IV | ACGT | 2 cut(s) | 672, 944 |
| HpyCH4V | TGCA | 5 cut(s) | 87, 256, 465, 836, 896 |
| HpyF3I | CTNAG | 5 cut(s) | 296, 434, 570, 596, 1263 |
| HpySE526I | ACGT | 2 cut(s) | 672, 944 |
| Hsp92II | CATG | 5 cut(s) | 102, 157, 260, 1023, 1169 |
| HspAI | GCGC | 1 cut(s) | 5 |
| Kzo9I | GATC | 6 cut(s) | 310, 423, 487, 660, 1142, 1242 |
| LmnI | GCTCC | 2 cut(s) | 906, 1169 |
| Lsp1109I | GCAGC | 1 cut(s) | 19 |
| LweI | GCATC | 2 cut(s) | 192, 1093 |
| MabI | ACCWGGT | 1 cut(s) | 700 |
| MaeI | CTAG | 2 cut(s) | 1133, 1182 |
| MaeII | ACGT | 2 cut(s) | 672, 944 |
| MaeIII | GTNAC | 4 cut(s) | 34, 291, 416, 1082 |
| MalI | GATC | 6 cut(s) | 312, 425, 489, 662, 1144, 1244 |
| MboI | GATC | 6 cut(s) | 310, 423, 487, 660, 1142, 1242 |
| MboII | GAAGA | 7 cut(s) | 38, 165, 281, 500, 533, 1007, 1090 |
| MfeI | CAATTG | 1 cut(s) | 897 |
| MhlI | GDGCHC | 1 cut(s) | 360 |
| MluCI | AATT | 9 cut(s) | 41, 148, 164, 402, 482, 635, 897, 1059, 1161 |
| MmeI | TCCRAC | 2 cut(s) | 632, 798 |
| Mph1103I | ATGCAT | 2 cut(s) | 89, 258 |
| MroXI | GAANNNNTTC | 1 cut(s) | 930 |
| MseI | TTAA | 3 cut(s) | 243, 617, 669 |
| MslI | CAYNNNNRTG | 1 cut(s) | 970 |
| MspI | CCGG | 2 cut(s) | 515, 878 |
| MspR9I | CCNGG | 2 cut(s) | 515, 702 |
| MunI | CAATTG | 1 cut(s) | 897 |
| Mva1269I | GAATGC | 2 cut(s) | 87, 745 |
| MvaI | CCWGG | 1 cut(s) | 702 |
| NciI | CCSGG | 1 cut(s) | 515 |
| NdeI | CATATG | 1 cut(s) | 983 |
| NdeII | GATC | 6 cut(s) | 310, 423, 487, 660, 1142, 1242 |
| NlaIII | CATG | 5 cut(s) | 102, 157, 260, 1023, 1169 |
| NlaIV | GGNNCC | 1 cut(s) | 908 |
| NmuCI | GTSAC | 2 cut(s) | 291, 416 |
| NsiI | ATGCAT | 2 cut(s) | 89, 258 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 669 |
| PctI | GAATGC | 2 cut(s) | 87, 745 |
| PdmI | GAANNNNTTC | 1 cut(s) | 930 |
| PfeI | GAWTC | 5 cut(s) | 78, 139, 560, 926, 1090 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 701, 1166 |
| PfoI | TCCNGGA | 1 cut(s) | 513 |
| PkrI | GCNGC | 1 cut(s) | 9 |
| Ple19I | CGATCG | 1 cut(s) | 1145 |
| Ppu21I | YACGTR | 1 cut(s) | 945 |
| PpuMI | RGGWCCY | 1 cut(s) | 688 |
| Psp124BI | GAGCTC | 1 cut(s) | 360 |
| Psp5II | RGGWCCY | 1 cut(s) | 688 |
| Psp6I | CCWGG | 1 cut(s) | 700 |
| PspGI | CCWGG | 1 cut(s) | 700 |
| PspN4I | GGNNCC | 1 cut(s) | 908 |
| PspPI | GGNCC | 2 cut(s) | 133, 688 |
| PspPPI | RGGWCCY | 1 cut(s) | 688 |
| PstNI | CAGNNNCTG | 1 cut(s) | 701 |
| PvuI | CGATCG | 1 cut(s) | 1145 |
| RsaI | GTAC | 5 cut(s) | 104, 632, 643, 716, 1250 |
| RsaNI | GTAC | 5 cut(s) | 103, 631, 642, 715, 1249 |
| RseI | CAYNNNNRTG | 1 cut(s) | 970 |
| SacI | GAGCTC | 1 cut(s) | 360 |
| SaqAI | TTAA | 3 cut(s) | 243, 617, 669 |
| SatI | GCNGC | 1 cut(s) | 8 |
| Sau3AI | GATC | 6 cut(s) | 310, 423, 487, 660, 1142, 1242 |
| Sau96I | GGNCC | 2 cut(s) | 133, 688 |
| ScaI | AGTACT | 1 cut(s) | 716 |
| ScrFI | CCNGG | 2 cut(s) | 515, 702 |
| SduI | GDGCHC | 1 cut(s) | 360 |
| SexAI | ACCWGGT | 1 cut(s) | 700 |
| SfaNI | GCATC | 2 cut(s) | 192, 1093 |
| SinI | GGWCC | 1 cut(s) | 688 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 970 |
| SmlI | CTYRAG | 1 cut(s) | 1148 |
| SmoI | CTYRAG | 1 cut(s) | 1148 |
| Sse9I | AATT | 9 cut(s) | 41, 148, 164, 402, 482, 635, 897, 1059, 1161 |
| SspI | AATATT | 2 cut(s) | 386, 592 |
| SspMI | CTAG | 2 cut(s) | 1133, 1182 |
| SstI | GAGCTC | 1 cut(s) | 360 |
| StyD4I | CCNGG | 2 cut(s) | 513, 700 |
| TaaI | ACNGT | 3 cut(s) | 119, 457, 527 |
| TaiI | ACGT | 2 cut(s) | 675, 947 |
| TaqI | TCGA | 6 cut(s) | 50, 400, 486, 663, 778, 978 |
| TasI | AATT | 9 cut(s) | 41, 148, 164, 402, 482, 635, 897, 1059, 1161 |
| TatI | WGTACW | 1 cut(s) | 714 |
| TfiI | GAWTC | 5 cut(s) | 78, 139, 560, 926, 1090 |
| Tru1I | TTAA | 3 cut(s) | 243, 617, 669 |
| Tru9I | TTAA | 3 cut(s) | 243, 617, 669 |
| TseFI | GTSAC | 2 cut(s) | 291, 416 |
| TseI | GCWGC | 1 cut(s) | 7 |
| Tsp45I | GTSAC | 2 cut(s) | 291, 416 |
| TspDTI | ATGAA | 7 cut(s) | 157, 170, 282, 534, 923, 1008, 1154 |
| TspGWI | ACGGA | 2 cut(s) | 804, 1053 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 701, 1166 |
| VpaK11BI | GGWCC | 1 cut(s) | 688 |
| XapI | RAATTY | 3 cut(s) | 148, 164, 482 |
| XbaI | TCTAGA | 1 cut(s) | 1132 |
| XmiI | GTMKAC | 1 cut(s) | 947 |
| XmnI | GAANNNNTTC | 1 cut(s) | 930 |
| XspI | CTAG | 2 cut(s) | 1133, 1182 |
| ZrmI | AGTACT | 1 cut(s) | 716 |
| Zsp2I | ATGCAT | 2 cut(s) | 89, 258 |