FvH4_6g06791

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
4070049 .. 4071275
1227 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g06791.t1

Sequence Viewer

Length: 1227 bp
ATGCCAAAACAGATGATAGTGGAATTCCTATCAAGGCTCCCTCCCAAATCTCTGATGAGATTCAAGTGCATCCGTAAGTCATGGTATGCTCTGATCAATGATCCCAAGTTCATAGACAAGCACCTCCACTCGTACAACAAAGACTCCTACACTTGCTTCCTTCTCAAGCGCACCGTAGTTCCAAGAAGCCAAACTATCAAAGAGGAAATCTTATTTTCATTCCTTTATGTTCTTAATGATCATGATGCTGAAGACAGTCACCCTCAATGTGTTGTTGAAGACATCTATATTCCGTCTTCTATGGGCCTAAAGACCAAAGGCAACATTATCGAGCTCCCTGGGTCAGATGCTATTAGAACTATATACATTACAGATCATTGTGATGGGATCATTTGTCTAGTTCTTTATACCGGACACCTTGTGTTGTACAACCCGTCGATACGAGAACTCAACATTCTTCCCCCCTCATGTCTTCACGAGTCATTCTCTTGTAATGTGGGATTCGGATATGATCCAAAATGTAAGGATTACAAGGTGGTTAACATTGTAGAATCAGGTGAAGATTCATATGATCATAACCAACGTCTGGTTATTCATCCTCCAAGGGCAGAAGTATACACTTTGGGTACTGCTTCTTGGAGGCAAATCAAGGTTGATTATTTAGAAACAGAAACTACTAGCTTTTGGCCTGACATGTATCAAATGTGCTTCAAGGGAGTTTTCTATTGGTTGGGTCATGAACAAGATAAGGAATACCTATGTTATTATGACAGGCTTTCATCTCCAAGCATTAGGGATGTAATCCTTTTGTATGACATGGGTGAAGAGGTGTTTCATATTACACTACTTCCGGATAGTTTCAAGGACCAAGGAGCAGGACAGGCTCTATTTATGAGACTAACAGAGTGGAATGGATCTATTGCTCTGTTTGGCTTTTCCTATTTAGGTCCGGAAATCGAGTCCCTTAAGATATGGATGATGGACGACTTTGGCGGTTGGACAAGACACTTGAACTATGACTCCATAATGGGAATTTATATGTCGTTGGTGTTATGGAGAAGTGACGAAGTTCTTATGGTTGCCGATGACGGACGTATAGTCTCGTATAGTCTAAGTAGAGATAGGGTTAAGTATTTTCCAATTCAAGGTGCTTGGGGAGAATATCAAGGTTTCCTTTGTGTGAATTCGAATAGCATTGTTCCAGTCGAGGGAGGCACAAAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

409

Amino Acids

47.16

Weight (kDa)

5.4

Isoelectric Point (pI)

46.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 104 - 329 1e-19 F-box associated beta propeller domain
FBA_3 PF08268 113 - 336 4.4e-20 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 586
AccI GTMKAC 1 cut(s) 615
AccIII TCCGGA 2 cut(s) 850, 949
AciI CCGC 1 cut(s) 993
AclWI GGATC 4 cut(s) 95, 395, 506, 922
AcsI RAATTY 3 cut(s) 23, 1032, 1183
AcuI CTGAAG 1 cut(s) 270
AdeI CACNNNGTG 1 cut(s) 421
AfaI GTAC 3 cut(s) 134, 428, 628
AfiI CCNNNNNNNGG 3 cut(s) 586, 1145, 1208
AflII CTTAAG 1 cut(s) 965
AflIII ACRYGT 1 cut(s) 693
AgsI TTSAA 6 cut(s) 64, 278, 712, 862, 1012, 1145
AhdI GACNNNNNGTC 1 cut(s) 1097
AjnI CCWGG 1 cut(s) 337
AloI GAACNNNNNNTCC 2 cut(s) 1004, 1036
AluBI AGCT 3 cut(s) 334, 681, 1223
AluI AGCT 3 cut(s) 334, 681, 1223
Alw21I GWGCWC 1 cut(s) 336
Alw26I GTCTC 2 cut(s) 889, 1105
AlwI GGATC 4 cut(s) 95, 395, 506, 922
Aor13HI TCCGGA 2 cut(s) 850, 949
AoxI GGCC 2 cut(s) 304, 686
ApoI RAATTY 3 cut(s) 23, 1032, 1183
AspLEI GCGC 1 cut(s) 171
AspS9I GGNCC 3 cut(s) 304, 865, 947
AsuHPI GGTGA 3 cut(s) 251, 569, 833
AsuII TTCGAA 1 cut(s) 1187
AvaII GGWCC 2 cut(s) 865, 947
BanII GRGCYC 1 cut(s) 336
BauI CACGAG 1 cut(s) 476
BbsI GAAGAC 4 cut(s) 258, 285, 288, 464
Bbv12I GWGCWC 1 cut(s) 336
BccI CCATC 2 cut(s) 377, 973
BcgI CGANNNNNNTGC 2 cut(s) 310, 344
BciT130I CCWGG 1 cut(s) 339
BclI TGATCA 3 cut(s) 93, 238, 571
BcoDI GTCTC 2 cut(s) 889, 1105
BfaI CTAG 2 cut(s) 398, 678
BfrI CTTAAG 1 cut(s) 965
Bme1390I CCNGG 1 cut(s) 339
Bme18I GGWCC 2 cut(s) 865, 947
BmeRI GACNNNNNGTC 1 cut(s) 1097
BmgT120I GGNCC 3 cut(s) 304, 865, 947
BmiI GGNNCC 1 cut(s) 38
BmrFI CCNGG 1 cut(s) 339
BmsI GCATC 3 cut(s) 78, 235, 337
BpiI GAAGAC 4 cut(s) 258, 285, 288, 464
BplI GAGNNNNNCTC 2 cut(s) 470, 502
Bpu14I TTCGAA 1 cut(s) 1187
BpuEI CTTGAG 1 cut(s) 149
BsaJI CCNNGG 4 cut(s) 337, 338, 602, 868
BsaWI WCCGGW 3 cut(s) 410, 850, 949
BsaXI ACNNNNNCTCC 4 cut(s) 128, 158, 1004, 1034
Bsc4I CCNNNNNNNGG 3 cut(s) 586, 1145, 1208
Bse1I ACTGG 1 cut(s) 1202
BseAI TCCGGA 2 cut(s) 850, 949
BseBI CCWGG 1 cut(s) 339
BseDI CCNNGG 4 cut(s) 337, 338, 602, 868
BseGI GGATG 4 cut(s) 69, 595, 802, 981
BseLI CCNNNNNNNGG 3 cut(s) 586, 1145, 1208
BseNI ACTGG 1 cut(s) 1202
BshFI GGCC 2 cut(s) 306, 688
BsiHKAI GWGCWC 1 cut(s) 336
BsiSI CCGG 3 cut(s) 411, 851, 950
BslFI GGGAC 1 cut(s) 946
BslI CCNNNNNNNGG 3 cut(s) 586, 1145, 1208
BsmAI GTCTC 2 cut(s) 889, 1105
BsmFI GGGAC 1 cut(s) 946
BsnI GGCC 2 cut(s) 306, 688
Bsp119I TTCGAA 1 cut(s) 1187
Bsp1286I GDGCHC 1 cut(s) 336
Bsp13I TCCGGA 2 cut(s) 850, 949
Bsp1407I TGTACA 1 cut(s) 426
Bsp143I GATC 8 cut(s) 93, 100, 238, 373, 387, 511, 571, 914
BspACI CCGC 1 cut(s) 993
BspANI GGCC 2 cut(s) 306, 688
BspEI TCCGGA 2 cut(s) 850, 949
BspHI TCATGA 2 cut(s) 241, 736
BspLI GGNNCC 1 cut(s) 38
BspPI GGATC 4 cut(s) 95, 395, 506, 922
BspT104I TTCGAA 1 cut(s) 1187
BspTI CTTAAG 1 cut(s) 965
BsrGI TGTACA 1 cut(s) 426
BsrI ACTGG 1 cut(s) 1202
BssECI CCNNGG 4 cut(s) 337, 338, 602, 868
BssMI GATC 8 cut(s) 93, 100, 238, 373, 387, 511, 571, 914
BssNAI GTATAC 1 cut(s) 616
BssSI CACGAG 1 cut(s) 476
BssT1I CCWWGG 2 cut(s) 602, 868
Bst1107I GTATAC 1 cut(s) 616
Bst2BI CACGAG 1 cut(s) 476
Bst2UI CCWGG 1 cut(s) 339
Bst4CI ACNGT 2 cut(s) 175, 257
Bst6I CTCTTC 1 cut(s) 819
BstAFI CTTAAG 1 cut(s) 965
BstAUI TGTACA 1 cut(s) 426
BstBI TTCGAA 1 cut(s) 1187
BstDEI CTNAG 1 cut(s) 1112
BstF5I GGATG 4 cut(s) 69, 595, 802, 981
BstHHI GCGC 1 cut(s) 171
BstKTI GATC 8 cut(s) 96, 103, 241, 376, 390, 514, 574, 917
BstMAI GTCTC 2 cut(s) 889, 1105
BstMBI GATC 8 cut(s) 93, 100, 238, 373, 387, 511, 571, 914
BstMWI GCNNNNNNNGC 1 cut(s) 881
BstNI CCWGG 1 cut(s) 339
BstNSI RCATGY 1 cut(s) 697
BstSCI CCNGG 1 cut(s) 337
BstV2I GAAGAC 4 cut(s) 258, 285, 288, 464
BstX2I RGATCY 1 cut(s) 914
BstYI RGATCY 1 cut(s) 914
BstZ17I GTATAC 1 cut(s) 616
BsuRI GGCC 2 cut(s) 306, 688
BtsCI GGATG 4 cut(s) 69, 595, 802, 981
CciI TCATGA 2 cut(s) 241, 736
CfoI GCGC 1 cut(s) 171
Cfr13I GGNCC 3 cut(s) 304, 865, 947
Csp6I GTAC 3 cut(s) 133, 427, 627
CviAII CATG 6 cut(s) 81, 242, 468, 694, 737, 817
CviQI GTAC 3 cut(s) 133, 427, 627
DdeI CTNAG 1 cut(s) 1112
DpnI GATC 8 cut(s) 95, 102, 240, 375, 389, 513, 573, 916
DpnII GATC 8 cut(s) 93, 100, 238, 373, 387, 511, 571, 914
DraIII CACNNNGTG 1 cut(s) 421
DriI GACNNNNNGTC 1 cut(s) 1097
Eam1104I CTCTTC 1 cut(s) 819
Eam1105I GACNNNNNGTC 1 cut(s) 1097
EarI CTCTTC 1 cut(s) 819
Ecl136II GAGCTC 1 cut(s) 334
Eco130I CCWWGG 2 cut(s) 602, 868
Eco24I GRGCYC 1 cut(s) 336
Eco47I GGWCC 2 cut(s) 865, 947
Eco53kI GAGCTC 1 cut(s) 334
Eco57I CTGAAG 1 cut(s) 270
EcoICRI GAGCTC 1 cut(s) 334
EcoRI GAATTC 2 cut(s) 23, 1183
EcoRII CCWGG 1 cut(s) 337
EcoT14I CCWWGG 2 cut(s) 602, 868
EcoT38I GRGCYC 1 cut(s) 336
ErhI CCWWGG 2 cut(s) 602, 868
FaeI CATG 6 cut(s) 84, 245, 471, 697, 740, 820
FalI AAGNNNNNCTT 2 cut(s) 1158, 1190
FaqI GGGAC 1 cut(s) 946
FatI CATG 6 cut(s) 80, 241, 467, 693, 736, 816
FauNDI CATATG 1 cut(s) 568
FbaI TGATCA 3 cut(s) 93, 238, 571
FblI GTMKAC 1 cut(s) 615
FokI GGATG 4 cut(s) 56, 582, 809, 988
FriOI GRGCYC 1 cut(s) 336
FspBI CTAG 2 cut(s) 398, 678
GlaI GCGC 1 cut(s) 170
HaeIII GGCC 2 cut(s) 306, 688
HapII CCGG 3 cut(s) 411, 851, 950
HhaI GCGC 1 cut(s) 171
Hin1II CATG 6 cut(s) 84, 245, 471, 697, 740, 820
Hin6I GCGC 1 cut(s) 169
HinP1I GCGC 1 cut(s) 169
HincII GTYRAC 1 cut(s) 541
HindII GTYRAC 1 cut(s) 541
HindIII AAGCTT 1 cut(s) 1221
HinfI GANTC 8 cut(s) 60, 143, 479, 501, 551, 563, 959, 1019
HpaI GTTAAC 1 cut(s) 541
HpaII CCGG 3 cut(s) 411, 851, 950
HphI GGTGA 3 cut(s) 251, 569, 833
Hpy166II GTNNAC 2 cut(s) 541, 616
Hpy188I TCNGA 4 cut(s) 54, 93, 346, 506
Hpy188III TCNNGA 5 cut(s) 242, 476, 737, 851, 950
Hpy8I GTNNAC 2 cut(s) 541, 616
Hpy99I CGWCG 1 cut(s) 439
HpyAV CCTTC 1 cut(s) 170
HpyCH4III ACNGT 2 cut(s) 175, 257
HpyCH4IV ACGT 2 cut(s) 583, 1093
HpyCH4V TGCA 1 cut(s) 69
HpyF10VI GCNNNNNNNGC 1 cut(s) 881
HpyF3I CTNAG 1 cut(s) 1112
HpySE526I ACGT 2 cut(s) 583, 1093
Hsp92II CATG 6 cut(s) 84, 245, 471, 697, 740, 820
HspAI GCGC 1 cut(s) 169
Kpn2I TCCGGA 2 cut(s) 850, 949
Ksp22I TGATCA 3 cut(s) 93, 238, 571
KspAI GTTAAC 1 cut(s) 541
Kzo9I GATC 8 cut(s) 93, 100, 238, 373, 387, 511, 571, 914
LmnI GCTCC 3 cut(s) 42, 339, 872
LweI GCATC 3 cut(s) 78, 235, 337
MaeI CTAG 2 cut(s) 398, 678
MaeII ACGT 2 cut(s) 583, 1093
MaeIII GTNAC 2 cut(s) 257, 1061
MalI GATC 8 cut(s) 95, 102, 240, 375, 389, 513, 573, 916
MboI GATC 8 cut(s) 93, 100, 238, 373, 387, 511, 571, 914
MboII GAAGA 7 cut(s) 263, 288, 290, 449, 464, 572, 836
MflI RGATCY 1 cut(s) 914
MhlI GDGCHC 1 cut(s) 336
MluCI AATT 4 cut(s) 23, 1032, 1140, 1183
MlyI GAGTC 4 cut(s) 137, 488, 968, 1013
MmeI TCCRAC 1 cut(s) 977
MroI TCCGGA 2 cut(s) 850, 949
MseI TTAA 4 cut(s) 234, 540, 966, 1128
MslI CAYNNNNRTG 1 cut(s) 381
MspCI CTTAAG 1 cut(s) 965
MspI CCGG 3 cut(s) 411, 851, 950
MspR9I CCNGG 1 cut(s) 339
MvaI CCWGG 1 cut(s) 339
MwoI GCNNNNNNNGC 1 cut(s) 881
NdeI CATATG 1 cut(s) 568
NdeII GATC 8 cut(s) 93, 100, 238, 373, 387, 511, 571, 914
NlaIII CATG 6 cut(s) 84, 245, 471, 697, 740, 820
NlaIV GGNNCC 1 cut(s) 38
NmuCI GTSAC 2 cut(s) 257, 1061
NspI RCATGY 1 cut(s) 697
NspV TTCGAA 1 cut(s) 1187
PagI TCATGA 2 cut(s) 241, 736
PasI CCCWGGG 1 cut(s) 338
PciI ACATGT 1 cut(s) 693
PfeI GAWTC 4 cut(s) 60, 501, 551, 563
PflMI CCANNNNNTGG 1 cut(s) 586
PleI GAGTC 4 cut(s) 137, 487, 967, 1013
PpsI GAGTC 4 cut(s) 137, 487, 967, 1013
PscI ACATGT 1 cut(s) 693
Psp124BI GAGCTC 1 cut(s) 336
Psp6I CCWGG 1 cut(s) 337
PspGI CCWGG 1 cut(s) 337
PspN4I GGNNCC 1 cut(s) 38
PspPI GGNCC 3 cut(s) 304, 865, 947
PsuI RGATCY 1 cut(s) 914
RsaI GTAC 3 cut(s) 134, 428, 628
RsaNI GTAC 3 cut(s) 133, 427, 627
RseI CAYNNNNRTG 1 cut(s) 381
SacI GAGCTC 1 cut(s) 336
SaqAI TTAA 4 cut(s) 234, 540, 966, 1128
Sau3AI GATC 8 cut(s) 93, 100, 238, 373, 387, 511, 571, 914
Sau96I GGNCC 3 cut(s) 304, 865, 947
SchI GAGTC 4 cut(s) 137, 488, 968, 1013
ScrFI CCNGG 1 cut(s) 339
SduI GDGCHC 1 cut(s) 336
SfaNI GCATC 3 cut(s) 78, 235, 337
SfuI TTCGAA 1 cut(s) 1187
SinI GGWCC 2 cut(s) 865, 947
SmiMI CAYNNNNRTG 1 cut(s) 381
SmlI CTYRAG 2 cut(s) 164, 965
SmoI CTYRAG 2 cut(s) 164, 965
Sse9I AATT 4 cut(s) 23, 1032, 1140, 1183
SsiI CCGC 1 cut(s) 993
SspMI CTAG 2 cut(s) 398, 678
SstI GAGCTC 1 cut(s) 336
StyD4I CCNGG 1 cut(s) 337
StyI CCWWGG 2 cut(s) 602, 868
TaaI ACNGT 2 cut(s) 175, 257
TaiI ACGT 2 cut(s) 586, 1096
TaqI TCGA 5 cut(s) 330, 437, 957, 1187, 1206
TasI AATT 4 cut(s) 23, 1032, 1140, 1183
TatI WGTACW 1 cut(s) 426
TfiI GAWTC 4 cut(s) 60, 501, 551, 563
Tru1I TTAA 4 cut(s) 234, 540, 966, 1128
Tru9I TTAA 4 cut(s) 234, 540, 966, 1128
TseFI GTSAC 2 cut(s) 257, 1061
Tsp45I GTSAC 2 cut(s) 257, 1061
TspDTI ATGAA 7 cut(s) 100, 207, 555, 584, 753, 768, 824
TspGWI ACGGA 3 cut(s) 62, 282, 1104
Van91I CCANNNNNTGG 1 cut(s) 586
Vha464I CTTAAG 1 cut(s) 965
VpaK11BI GGWCC 2 cut(s) 865, 947
XapI RAATTY 3 cut(s) 23, 1032, 1183
XceI RCATGY 1 cut(s) 697
XmiI GTMKAC 1 cut(s) 615
XspI CTAG 2 cut(s) 398, 678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.