RchiOBHm_Chr6g0279591

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
42705946 .. 42707322
1377 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25072

Sequence Viewer

Length: 1377 bp
ATGGCCGCCCAAAACTCGGATGTGGAGGAACAAATACTATCGCTTTTGCCTCCCAAAACTCTGATGCGATTCAAGTTGGTCTCCAAACGGTGGTATGCTTTAATCAGCAATCCCAGGTTTGTAGATAAGCACCTCTCCGATTTCAATTCCATGCATAATAATCGGTCCACCTCCGTCTTTATAAAGCGTTTGGTTGTTAATGAGGACACAAAGGAAAGCGAGACTCTGTTCTCGCTGCTTAGTTTTTCCAATTGTAGTGATGATGATAGTAATGATGGTGGCGAGCCTGCTAGCTTTCTTTTGGGTGTCGAGGATATGGAGATTCCATTCCCAATGACTAGTCTAGACACCACTAGGGGCGAATCACTTGAAATTGTAGGCCATTGTAACGGGATCATATGTCTGAGTATTTCTCGCTCTACCAAGGTGTTTTTATGGAACCCGGCAATTAGAGAATTCAAGCTTCTACCCCCGGAACCATACCTTCCACATTGGACCAGAACATGCTCAACCGCGGCGGATTATCCCAAAGATGTTGTTACCATGCCATTTTTCTCAGACGATCCGGTGTTCGGCTATGATCCTCTATTGCAAGATTACAAAGTCGTCGAGATTGGATTTCAAGGAGCATATCGTGAGGAAGATAATTATGTTTTTCATCCTCCCCTAGCAGCGGTATACACCCGGGGCACTAATTCCTGGAGAGAGATCAGTACTGATTCTTTAGAAACAGAAACTACTAACCTATGGCCTGGAAATTTCCAAATGTACTTCAACGGGGTGTGTTATTGGTTGGGAAGAGAGCAATTGAAGGAAGGCAGTATTTATGATTACATGGAAGAGGAATACGTTAGGAAATTAATCATTTCGTTTGACATGAGTCGTGAAGTATTTCATGACATACTGTTACCATATCAGTTGATTAACCCTCCATGCATCACTGTGTGGAATGAATCTATTGCTCTTTTTAATTTGCGTGATAGTGGTGATGCAGATTCTTCAAATCTTTTGCCTTATAGTGATGCTTCAGATGCTGCTAAATTTGAATGTTTGGATATATGGGTGATGGATGGCTTTGCTGGTGTCGAATATTCTTGGACAAAACACTTGACTCTTGAGCTCAGAGAACAACCATCTCAGAGCATATCGTCATTCTGGTGGGATCAGACCACATTAGTGATGTGGAACCATGAACTTCTCATGGTGTCCCCAAATAGATCTATAGTGTGTTATAATCTAAGTTCCAGAAGGCTTAAGTATCTACCAATTCAAAGCGGCTCAAAGGACCGTGAAGCTGTTGCTGTTGTTTATCTAAACAGTATAGTTTCGGTCGTGGGAGACAAGAAGCTTCAGAGCAGAGAAAATGTAGCAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

458

Amino Acids

52.54

Weight (kDa)

4.77

Isoelectric Point (pI)

46.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 8 - 41 1.3e-07 F-box domain
F-box-like PF12937 11 - 39 3.1e-06 F-box-like
FBA_3 PF08268 109 - 430 1.4e-11 F-box associated beta propeller domain
FBA_1 PF07734 114 - 444 3.2e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000046)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19120 FvH4_1g19120 FvH4_1g19120 FvH4_1g19141 FvH4_1g19142 FvH4_2g10221 FvH4_2g25660 FvH4_5g01061 FvH4_5g09390 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_5g33841 FvH4_6g06590 FvH4_6g06610 FvH4_6g06630 FvH4_6g06660 FvH4_6g06663 FvH4_6g06670 FvH4_6g06680 FvH4_6g06690 FvH4_6g06700 FvH4_6g06730 FvH4_6g06750 FvH4_6g06760 FvH4_6g06780 FvH4_6g06790 FvH4_6g06791 FvH4_6g06802 FvH4_6g06820 FvH4_6g06831 FvH4_6g06840 FvH4_6g06840 FvH4_6g06850 FvH4_6g07680 FvH4_6g07700 FvH4_6g07710 FvH4_6g07720 FvH4_6g07720 FvH4_6g16041
malus_domestica MD00G1054600.v1.1 MD00G1149800.v1.1 MD01G1175000.v1.1 MD02G1021000.v1.1 MD02G1023800.v1.1 MD03G1052800.v1.1 MD04G1192400.v1.1 MD04G1199200.v1.1 MD09G1130400.v1.1 MD09G1130700.v1.1 MD10G1162200.v1.1 MD10G1162400.v1.1 MD10G1162500.v1.1 MD10G1162900.v1.1 MD12G1213000.v1.1 MD15G1153400.v1.1 MD15G1166700.v1.1 MD15G1166800.v1.1 MD15G1167000.v1.1 MD15G1167200.v1.1 MD15G1167500.v1.1 MD15G1167700.v1.1 MD17G1251100.v1.1 MD17G1251200.v1.1 MD17G1251300.v1.1 MD17G1251900.v1.1 MD17G1252000.v1.1 MD17G1252200.v1.1 MD17G1252300.v1.1 MD17G1252700.v1.1 MD17G1252800.v1.1 MD17G1253000.v1.1 MD17G1253700.v1.1 MD17G1253800.v1.1 MD17G1254200.v1.1 MD17G1254600.v1.1 MD17G1254700.v1.1 MD17G1255300.v1.1 MD17G1255800.v1.1 MD17G1255900.v1.1 MD17G1256000.v1.1 MD17G1256100.v1.1 MD17G1256300.v1.1
prunus_persica Prupe.6G311100_v2.0.a1 Prupe.6G311100_v2.0.a1 Prupe.6G316700_v2.0.a1 Prupe.6G318300_v2.0.a1 Prupe.6G319000_v2.0.a1 Prupe.6G319300_v2.0.a1 Prupe.6G319800_v2.0.a1 Prupe.6G320600_v2.0.a1 Prupe.8G219300_v2.0.a1 Prupe.8G219500_v2.0.a1
pyrus_communis pycom02g01850 pycom02g02140 pycom02g02150 pycom02g13410 pycom04g17600 pycom09g05340 pycom10g14000 pycom10g14030 pycom12g19920 pycom14g04440 pycom14g14190 pycom15g13780 pycom15g14890 pycom15g14930 pycom15g14950 pycom15g14970 pycom15g14980 pycom17g25470 pycom17g25480 pycom17g25490 pycom17g25550 pycom17g25600 pycom17g25640 pycom17g25660 pycom17g25800 pycom17g25820 pycom17g25830 pycom17g25840 pycom17g25850 pycom2181g00010
rosa_chinensis RchiOBHm_Chr2g0110151 RchiOBHm_Chr2g0110231 RchiOBHm_Chr2g0111631 RchiOBHm_Chr2g0111681 RchiOBHm_Chr2g0120621 RchiOBHm_Chr2g0123521 RchiOBHm_Chr3g0455781 RchiOBHm_Chr3g0455791 RchiOBHm_Chr3g0455861 RchiOBHm_Chr3g0455891 RchiOBHm_Chr3g0455931 RchiOBHm_Chr3g0455991 RchiOBHm_Chr3g0456091 RchiOBHm_Chr3g0456131 RchiOBHm_Chr3g0456171 RchiOBHm_Chr3g0456241 RchiOBHm_Chr3g0456251 RchiOBHm_Chr3g0456291 RchiOBHm_Chr3g0456311 RchiOBHm_Chr3g0457391 RchiOBHm_Chr3g0457451 RchiOBHm_Chr3g0458451 RchiOBHm_Chr3g0458461 RchiOBHm_Chr3g0461521 RchiOBHm_Chr3g0491541 RchiOBHm_Chr4g0398411 RchiOBHm_Chr4g0398421 RchiOBHm_Chr4g0413511 RchiOBHm_Chr4g0436451 RchiOBHm_Chr6g0259371 RchiOBHm_Chr6g0262491 RchiOBHm_Chr6g0279581 RchiOBHm_Chr6g0279591 RchiOBHm_Chr6g0293881 RchiOBHm_Chr6g0293911 RchiOBHm_Chr7g0233181
rosa_laevigata RLG00000008214 RLG00000013136 RLG00000015567 RLG00000019131 RLG00000024923 RLG00000024926 RLG00000025154 RLG00000025156 RLG00000025223 RLG00000025229 RLG00000025317 RLG00000025326
rosa_multiflora Rmu_co8090890.1_g000001 Rmu_co8287369.1_g000001 Rmu_co8301281.1_g000001 Rmu_sc0000279.1_g000014 Rmu_sc0000279.1_g000046 Rmu_sc0000279.1_g000061 Rmu_sc0000279.1_g000065 Rmu_sc0000596.1_g000011 Rmu_sc0000883.1_g000005 Rmu_sc0001267.1_g000019 Rmu_sc0001581.1_g000013 Rmu_sc0001844.1_g000008 Rmu_sc0001844.1_g000017 Rmu_sc0001861.1_g000008 Rmu_sc0001861.1_g000044 Rmu_sc0001861.1_g000063 Rmu_sc0001861.1_g000073 Rmu_sc0001861.1_g000106 Rmu_sc0002607.1_g000025 Rmu_sc0002607.1_g000026 Rmu_sc0002607.1_g000032 Rmu_sc0002607.1_g000034 Rmu_sc0002607.1_g000035 Rmu_sc0002607.1_g000042 Rmu_sc0002607.1_g000051 Rmu_sc0002607.1_g000058 Rmu_sc0002625.1_g000002 Rmu_sc0002625.1_g000003 Rmu_sc0002625.1_g000004 Rmu_sc0002677.1_g000001 Rmu_sc0003469.1_g000009 Rmu_sc0004010.1_g000001 Rmu_sc0004010.1_g000002 Rmu_sc0004094.1_g000042 Rmu_sc0004304.1_g000025 Rmu_sc0004649.1_g000009 Rmu_sc0004649.1_g000010 Rmu_sc0005278.1_g000027 Rmu_sc0005442.1_g000001 Rmu_sc0005647.1_g000011 Rmu_sc0005791.1_g000018 Rmu_sc0005791.1_g000024 Rmu_sc0006888.1_g000002 Rmu_sc0006888.1_g000015 Rmu_sc0006888.1_g000026 Rmu_sc0006888.1_g000084 Rmu_sc0007404.1_g000019 Rmu_sc0008973.1_g000010 Rmu_sc0008973.1_g000017 Rmu_sc0010432.1_g000005 Rmu_sc0013809.1_g000005 Rmu_sc0013809.1_g000006 Rmu_sc0016556.1_g000002 Rmu_sc0018685.1_g000001 Rmu_sc0020335.1_g000003 Rmu_sc0020335.1_g000006 Rmu_sc0023945.1_g000004 Rmu_sc0028194.1_g000001 Rmu_sc0029200.1_g000001 Rmu_sc0039289.1_g000001 Rmu_ssc0000046.1_g000002 Rmu_ssc0000046.1_g000004 Rmu_ssc0000046.1_g000005 Rmu_ssc0000046.1_g000006 Rmu_ssc0000046.1_g000013 Rmu_ssc0000050.1_g000055 Rmu_ssc0000091.1_g000004 Rmu_ssc0000240.1_g000040 Rmu_ssc0000240.1_g000041 Rmu_ssc0000470.1_g000007
rosa_roxburghii Rroxscaffold_177G00434420 Rroxscaffold_2G00091790 Rroxscaffold_2G00132170 Rroxscaffold_2G00132210 Rroxscaffold_2G00133660 Rroxscaffold_2G00133670 Rroxscaffold_2G00133680 Rroxscaffold_3G00227520 Rroxscaffold_5G00343380 Rroxscaffold_5G00357410 Rroxscaffold_6G00418180 Rroxscaffold_6G00418210 Rroxscaffold_6G00421020 Rroxscaffold_6G00421040 Rroxscaffold_6G00421870 Rroxscaffold_6G00421880 Rroxscaffold_6G00421890 Rroxscaffold_6G00421930 Rroxscaffold_6G00422700 Rroxscaffold_6G00422760 Rroxscaffold_6G00422820 Rroxscaffold_6G00422850 Rroxscaffold_6G00422860 Rroxscaffold_6G00422900 Rroxscaffold_6G00422910 Rroxscaffold_6G00422930 Rroxscaffold_6G00422970 Rroxscaffold_6G00423220 Rroxscaffold_6G00423450 Rroxscaffold_6G00423460 Rroxscaffold_6G00423730 Rroxscaffold_6G00423770 Rroxscaffold_6G00423810 Rroxscaffold_6G00423870 Rroxscaffold_6G00423880 Rroxscaffold_6G00423920 Rroxscaffold_6G00423940 Rroxscaffold_6G00423950 Rroxscaffold_6G00423980 Rroxscaffold_6G00423990 Rroxscaffold_7G00173840 Rroxscaffold_7G00188810 Rroxscaffold_7G00205200 Rroxscaffold_7G00206630
rosa_rugosa Rorug02G0165800 Rorug02G0165900 Rorug02G0174900 Rorug02G0175000 Rorug02G0175100 Rorug02G0175400 Rorug02G0175400 Rorug02G0229800 Rorug02G0461100.1 Rorug03G0009900 Rorug03G0010100 Rorug03G0010500 Rorug03G0010600 Rorug03G0010800 Rorug03G0011000 Rorug03G0011100 Rorug03G0011200 Rorug03G0011500 Rorug03G0011500 Rorug03G0011700 Rorug03G0011700 Rorug03G0011900 Rorug03G0012500 Rorug03G0012600 Rorug03G0012600 Rorug03G0020400 Rorug03G0020400 Rorug03G0020400 Rorug03G0028500 Rorug03G0028800 Rorug03G0028900 Rorug03G0029000 Rorug03G0029100 Rorug03G0051400 Rorug03G0051400 Rorug03G0051500 Rorug03G0249800 Rorug04G0007900 Rorug04G0120800 Rorug05G0588600 Rorug06G0125500 Rorug06G0125600 Rorug06G0125600 Rorug06G0125700 Rorug06G0125800.1 Rorug06G0125900 Rorug06G0239000 Rorug06G0239200 Rorug06G0239300 Rorug07G0279500
rosa_samantha Rh1CG180200 Rh2AG218000 Rh2AG218300 Rh2AG304900 Rh2BG240100 Rh2BG297600 Rh2BG311400 Rh2BG313100 Rh2CG231800 Rh2DG223700 Rh2DG224100 Rh2DG224800 Rh2DG235800 Rh2DG328900 Rh3AG087700 Rh3AG109600 Rh3BG090500 Rh3BG090700 Rh3BG113000 Rh3CG090800 Rh3CG114800 Rh3DG073000 Rh3DG073300 Rh3DG075900 Rh4AG086000 Rh4BG179800 Rh4CG093800 Rh6AG234500 Rh6BG238900 Rh6BG239000 Rh6CG079900 Rh6CG222200 Rh6CG240900 Rh6DG087200 Rh6DG100800 Rh7DG423000
rosa_wichuraiana Rw0G009310 Rw0G009320 Rw2G016840 Rw2G017600 Rw2G017630 Rw2G022960 Rw2G024440 Rw3G005620 Rw3G005650 Rw3G005700 Rw3G005740 Rw3G005750 Rw3G005770 Rw3G005790 Rw3G005810 Rw3G005840 Rw3G005850 Rw3G005970 Rw3G006000 Rw3G006050 Rw3G006060 Rw3G006070 Rw3G006080 Rw3G006090 Rw3G006120 Rw3G006130 Rw3G006150 Rw3G006180 Rw3G006190 Rw3G006220 Rw3G006920 Rw3G006930 Rw3G007460 Rw3G007470 Rw3G009280 Rw4G007160 Rw4G007190 Rw4G015040 Rw6G008980 Rw6G010260 Rw6G020470 Rw6G020480 Rw6G030660 Rw6G030680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 182, 1233
AccB7I CCANNNNNTGG 1 cut(s) 90
AccI GTMKAC 1 cut(s) 678
AccII CGCG 1 cut(s) 515
AciI CCGC 6 cut(s) 6, 513, 515, 518, 674, 1275
AclWI GGATC 4 cut(s) 401, 557, 575, 1170
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 455, 757, 1040
AcuI CTGAAG 2 cut(s) 1011, 1334
AdeI CACNNNGTG 1 cut(s) 945
AfaI GTAC 2 cut(s) 715, 770
AfiI CCNNNNNNNGG 4 cut(s) 16, 90, 572, 673
AflII CTTAAG 1 cut(s) 1253
AhlI ACTAGT 1 cut(s) 338
AjnI CCWGG 3 cut(s) 113, 698, 751
AleI CACNNNNGTG 1 cut(s) 1175
AluBI AGCT 5 cut(s) 294, 463, 1120, 1295, 1348
AluI AGCT 5 cut(s) 294, 463, 1120, 1295, 1348
Alw21I GWGCWC 1 cut(s) 1122
Alw26I GTCTC 3 cut(s) 85, 215, 1332
AlwI GGATC 4 cut(s) 401, 557, 575, 1170
AlwNI CAGNNNCTG 1 cut(s) 1034
Ama87I CYCGRG 1 cut(s) 684
AoxI GGCC 3 cut(s) 3, 379, 749
ApeKI GCWGC 3 cut(s) 235, 671, 1034
ApoI RAATTY 3 cut(s) 455, 757, 1040
AseI ATTAAT 1 cut(s) 860
Asp700I GAANNNNTTC 1 cut(s) 891
AspS9I GGNCC 3 cut(s) 165, 495, 1285
AsuC2I CCSGG 4 cut(s) 443, 473, 685, 686
AsuHPI GGTGA 2 cut(s) 998, 1075
AsuNHI GCTAGC 1 cut(s) 290
AvaI CYCGRG 1 cut(s) 684
AvaII GGWCC 3 cut(s) 165, 495, 1285
BaeGI GKGCMC 1 cut(s) 692
BanII GRGCYC 1 cut(s) 1122
Bbv12I GWGCWC 1 cut(s) 1122
BbvI GCAGC 3 cut(s) 222, 683, 1021
BccI CCATC 4 cut(s) 269, 1060, 1064, 1141
BcgI CGANNNNNNTGC 2 cut(s) 143, 177
BciT130I CCWGG 3 cut(s) 115, 700, 753
BcnI CCSGG 4 cut(s) 443, 473, 685, 686
BcoDI GTCTC 3 cut(s) 85, 215, 1332
BcuI ACTAGT 1 cut(s) 338
BfaI CTAG 5 cut(s) 291, 339, 344, 354, 668
BfmI CTRYAG 1 cut(s) 1221
BfrI CTTAAG 1 cut(s) 1253
BglII AGATCT 1 cut(s) 1217
BisI GCNGC 6 cut(s) 6, 236, 516, 672, 1035, 1276
BlsI GCNGC 6 cut(s) 7, 237, 517, 673, 1036, 1277
BmcAI AGTACT 1 cut(s) 715
Bme1390I CCNGG 7 cut(s) 115, 443, 473, 685, 686, 700, 753
Bme18I GGWCC 3 cut(s) 165, 495, 1285
BmeT110I CYCGRG 1 cut(s) 684
BmgT120I GGNCC 3 cut(s) 165, 495, 1285
BmiI GGNNCC 3 cut(s) 440, 477, 1187
BmrFI CCNGG 7 cut(s) 115, 443, 473, 685, 686, 700, 753
BmsI GCATC 5 cut(s) 54, 945, 979, 1012, 1021
BmtI GCTAGC 1 cut(s) 294
BoxI GACNNNNGTC 1 cut(s) 879
BplI GAGNNNNNCTC 2 cut(s) 397, 429
BpmI CTGGAG 1 cut(s) 721
BpuEI CTTGAG 1 cut(s) 1136
BpuMI CCSGG 4 cut(s) 443, 473, 685, 686
BsaI GGTCTC 1 cut(s) 85
BsaJI CCNNGG 6 cut(s) 113, 423, 471, 513, 684, 685
BsaWI WCCGGW 1 cut(s) 565
Bsc4I CCNNNNNNNGG 4 cut(s) 16, 90, 572, 673
Bse3DI GCAATG 1 cut(s) 1377
BseBI CCWGG 3 cut(s) 115, 700, 753
BseDI CCNNGG 6 cut(s) 113, 423, 471, 513, 684, 685
BseGI GGATG 3 cut(s) 25, 658, 1075
BseLI CCNNNNNNNGG 4 cut(s) 16, 90, 572, 673
BseMI GCAATG 1 cut(s) 1377
BseMII CTCAG 4 cut(s) 395, 570, 1135, 1151
BseSI GKGCMC 1 cut(s) 692
BseXI GCAGC 3 cut(s) 222, 683, 1021
Bsh1236I CGCG 1 cut(s) 515
Bsh1285I CGRYCG 1 cut(s) 1332
BshFI GGCC 3 cut(s) 5, 381, 751
BsiEI CGRYCG 1 cut(s) 1332
BsiHKAI GWGCWC 1 cut(s) 1122
BsiHKCI CYCGRG 1 cut(s) 684
BsiSI CCGG 4 cut(s) 443, 473, 566, 685
BslFI GGGAC 1 cut(s) 1192
BslI CCNNNNNNNGG 4 cut(s) 16, 90, 572, 673
BsmAI GTCTC 3 cut(s) 85, 215, 1332
BsmFI GGGAC 1 cut(s) 1192
BsnI GGCC 3 cut(s) 5, 381, 751
Bso31I GGTCTC 1 cut(s) 85
BsoBI CYCGRG 1 cut(s) 684
Bsp1286I GDGCHC 2 cut(s) 692, 1122
Bsp143I GATC 6 cut(s) 393, 562, 580, 708, 1162, 1217
BspACI CCGC 6 cut(s) 6, 513, 515, 518, 674, 1275
BspANI GGCC 3 cut(s) 5, 381, 751
BspCNI CTCAG 4 cut(s) 396, 569, 1134, 1150
BspFNI CGCG 1 cut(s) 515
BspHI TCATGA 1 cut(s) 895
BspLI GGNNCC 3 cut(s) 440, 477, 1187
BspOI GCTAGC 1 cut(s) 294
BspPI GGATC 4 cut(s) 401, 557, 575, 1170
BspTI CTTAAG 1 cut(s) 1253
BspTNI GGTCTC 1 cut(s) 85
BsrDI GCAATG 1 cut(s) 1377
BssECI CCNNGG 6 cut(s) 113, 423, 471, 513, 684, 685
BssMI GATC 6 cut(s) 393, 562, 580, 708, 1162, 1217
BssNAI GTATAC 1 cut(s) 679
BssT1I CCWWGG 1 cut(s) 423
Bst1107I GTATAC 1 cut(s) 679
Bst2UI CCWGG 3 cut(s) 115, 700, 753
Bst4CI ACNGT 5 cut(s) 90, 906, 943, 1289, 1319
Bst6I CTCTTC 2 cut(s) 793, 834
BstAFI CTTAAG 1 cut(s) 1253
BstC8I GCNNGC 3 cut(s) 284, 288, 292
BstDEI CTNAG 6 cut(s) 239, 404, 556, 1121, 1137, 1238
BstDSI CCRYGG 1 cut(s) 513
BstF5I GGATG 3 cut(s) 25, 658, 1075
BstFNI CGCG 1 cut(s) 515
BstKTI GATC 6 cut(s) 396, 565, 583, 711, 1165, 1220
BstMAI GTCTC 3 cut(s) 85, 215, 1332
BstMBI GATC 6 cut(s) 393, 562, 580, 708, 1162, 1217
BstMCI CGRYCG 1 cut(s) 1332
BstMWI GCNNNNNNNGC 1 cut(s) 1031
BstNI CCWGG 3 cut(s) 115, 700, 753
BstNSI RCATGY 1 cut(s) 507
BstPAI GACNNNNGTC 1 cut(s) 879
BstSCI CCNGG 7 cut(s) 113, 441, 471, 683, 684, 698, 751
BstSFI CTRYAG 1 cut(s) 1221
BstSLI GKGCMC 1 cut(s) 692
BstUI CGCG 1 cut(s) 515
BstV1I GCAGC 3 cut(s) 222, 683, 1021
BstX2I RGATCY 1 cut(s) 1217
BstYI RGATCY 1 cut(s) 1217
BstZ17I GTATAC 1 cut(s) 679
BsuRI GGCC 3 cut(s) 5, 381, 751
BtgI CCRYGG 1 cut(s) 513
BtsCI GGATG 3 cut(s) 25, 658, 1075
BtsIMutI CAGTG 1 cut(s) 939
Cac8I GCNNGC 3 cut(s) 284, 288, 292
CaiI CAGNNNCTG 1 cut(s) 1034
CciI TCATGA 1 cut(s) 895
Cfr13I GGNCC 3 cut(s) 165, 495, 1285
Cfr42I CCGCGG 1 cut(s) 516
Cfr9I CCCGGG 1 cut(s) 684
Csp6I GTAC 2 cut(s) 714, 769
CviAII CATG 9 cut(s) 151, 504, 544, 835, 877, 896, 933, 1190, 1201
CviQI GTAC 2 cut(s) 714, 769
DdeI CTNAG 6 cut(s) 239, 404, 556, 1121, 1137, 1238
DpnI GATC 6 cut(s) 395, 564, 582, 710, 1164, 1219
DpnII GATC 6 cut(s) 393, 562, 580, 708, 1162, 1217
DraIII CACNNNGTG 1 cut(s) 945
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 793, 834
EarI CTCTTC 2 cut(s) 793, 834
EciI GGCGGA 1 cut(s) 533
Ecl136II GAGCTC 1 cut(s) 1120
Eco130I CCWWGG 1 cut(s) 423
Eco24I GRGCYC 1 cut(s) 1122
Eco31I GGTCTC 1 cut(s) 85
Eco47I GGWCC 3 cut(s) 165, 495, 1285
Eco53kI GAGCTC 1 cut(s) 1120
Eco57I CTGAAG 2 cut(s) 1011, 1334
Eco88I CYCGRG 1 cut(s) 684
EcoICRI GAGCTC 1 cut(s) 1120
EcoRI GAATTC 1 cut(s) 455
EcoRII CCWGG 3 cut(s) 113, 698, 751
EcoT14I CCWWGG 1 cut(s) 423
EcoT22I ATGCAT 2 cut(s) 156, 938
EcoT38I GRGCYC 1 cut(s) 1122
ErhI CCWWGG 1 cut(s) 423
FaeI CATG 9 cut(s) 154, 507, 547, 838, 880, 899, 936, 1193, 1204
FaqI GGGAC 1 cut(s) 1192
FatI CATG 9 cut(s) 150, 503, 543, 834, 876, 895, 932, 1189, 1200
FauNDI CATATG 1 cut(s) 398
FblI GTMKAC 1 cut(s) 678
Fnu4HI GCNGC 6 cut(s) 6, 236, 516, 672, 1035, 1276
FokI GGATG 3 cut(s) 32, 645, 1082
FriOI GRGCYC 1 cut(s) 1122
Fsp4HI GCNGC 6 cut(s) 6, 236, 516, 672, 1035, 1276
FspBI CTAG 5 cut(s) 291, 339, 344, 354, 668
GluI GCNGC 6 cut(s) 6, 236, 516, 672, 1035, 1276
GsuI CTGGAG 1 cut(s) 721
HaeIII GGCC 3 cut(s) 5, 381, 751
HapII CCGG 4 cut(s) 443, 473, 566, 685
Hin1II CATG 9 cut(s) 154, 507, 547, 838, 880, 899, 936, 1193, 1204
HindIII AAGCTT 2 cut(s) 461, 1346
HinfI GANTC 9 cut(s) 69, 223, 322, 362, 719, 880, 953, 995, 1111
HpaII CCGG 4 cut(s) 443, 473, 566, 685
HphI GGTGA 2 cut(s) 998, 1075
Hpy166II GTNNAC 2 cut(s) 168, 679
Hpy188III TCNNGA 7 cut(s) 344, 610, 635, 884, 896, 1115, 1245
Hpy8I GTNNAC 2 cut(s) 168, 679
Hpy99I CGWCG 1 cut(s) 611
HpyAV CCTTC 4 cut(s) 494, 805, 809, 1242
HpyCH4III ACNGT 5 cut(s) 90, 906, 943, 1289, 1319
HpyCH4IV ACGT 1 cut(s) 849
HpyCH4V TGCA 4 cut(s) 154, 592, 936, 992
HpyF10VI GCNNNNNNNGC 1 cut(s) 1031
HpyF3I CTNAG 6 cut(s) 239, 404, 556, 1121, 1137, 1238
HpySE526I ACGT 1 cut(s) 849
Hsp92II CATG 9 cut(s) 154, 507, 547, 838, 880, 899, 936, 1193, 1204
KspI CCGCGG 1 cut(s) 516
Kzo9I GATC 6 cut(s) 393, 562, 580, 708, 1162, 1217
LmnI GCTCC 1 cut(s) 626
Lsp1109I GCAGC 3 cut(s) 222, 683, 1021
LweI GCATC 5 cut(s) 54, 945, 979, 1012, 1021
MaeI CTAG 5 cut(s) 291, 339, 344, 354, 668
MaeII ACGT 1 cut(s) 849
MaeIII GTNAC 3 cut(s) 386, 538, 906
MalI GATC 6 cut(s) 395, 564, 582, 710, 1164, 1219
MboI GATC 6 cut(s) 393, 562, 580, 708, 1162, 1217
MboII GAAGA 4 cut(s) 653, 810, 851, 990
MfeI CAATTG 2 cut(s) 250, 806
MflI RGATCY 1 cut(s) 1217
MhlI GDGCHC 2 cut(s) 692, 1122
MlyI GAGTC 3 cut(s) 217, 889, 1105
Mph1103I ATGCAT 2 cut(s) 156, 938
MroXI GAANNNNTTC 1 cut(s) 891
MseI TTAA 6 cut(s) 101, 198, 860, 924, 969, 1254
MslI CAYNNNNRTG 3 cut(s) 941, 1156, 1175
MspA1I CMGCKG 2 cut(s) 515, 674
MspCI CTTAAG 1 cut(s) 1253
MspI CCGG 4 cut(s) 443, 473, 566, 685
MspR9I CCNGG 7 cut(s) 115, 443, 473, 685, 686, 700, 753
MunI CAATTG 2 cut(s) 250, 806
MvaI CCWGG 3 cut(s) 115, 700, 753
MvnI CGCG 1 cut(s) 515
MwoI GCNNNNNNNGC 1 cut(s) 1031
NciI CCSGG 4 cut(s) 443, 473, 685, 686
NdeI CATATG 1 cut(s) 398
NdeII GATC 6 cut(s) 393, 562, 580, 708, 1162, 1217
NheI GCTAGC 1 cut(s) 290
NlaIII CATG 9 cut(s) 154, 507, 547, 838, 880, 899, 936, 1193, 1204
NlaIV GGNNCC 3 cut(s) 440, 477, 1187
NsiI ATGCAT 2 cut(s) 156, 938
NspI RCATGY 1 cut(s) 507
OliI CACNNNNGTG 1 cut(s) 1175
PagI TCATGA 1 cut(s) 895
PdmI GAANNNNTTC 1 cut(s) 891
PfeI GAWTC 6 cut(s) 69, 322, 362, 719, 953, 995
PflMI CCANNNNNTGG 1 cut(s) 90
PfoI TCCNGGA 1 cut(s) 698
PkrI GCNGC 6 cut(s) 7, 237, 517, 673, 1036, 1277
PleI GAGTC 3 cut(s) 217, 888, 1105
PpsI GAGTC 3 cut(s) 217, 888, 1105
PshAI GACNNNNGTC 1 cut(s) 879
PshBI ATTAAT 1 cut(s) 860
PsiI TTATAA 2 cut(s) 182, 1233
Psp124BI GAGCTC 1 cut(s) 1122
Psp6I CCWGG 3 cut(s) 113, 698, 751
PspGI CCWGG 3 cut(s) 113, 698, 751
PspN4I GGNNCC 3 cut(s) 440, 477, 1187
PspPI GGNCC 3 cut(s) 165, 495, 1285
PstNI CAGNNNCTG 1 cut(s) 1034
PsuI RGATCY 1 cut(s) 1217
RsaI GTAC 2 cut(s) 715, 770
RsaNI GTAC 2 cut(s) 714, 769
RseI CAYNNNNRTG 3 cut(s) 941, 1156, 1175
SacI GAGCTC 1 cut(s) 1122
SacII CCGCGG 1 cut(s) 516
SaqAI TTAA 6 cut(s) 101, 198, 860, 924, 969, 1254
SatI GCNGC 6 cut(s) 6, 236, 516, 672, 1035, 1276
Sau3AI GATC 6 cut(s) 393, 562, 580, 708, 1162, 1217
Sau96I GGNCC 3 cut(s) 165, 495, 1285
ScaI AGTACT 1 cut(s) 715
SchI GAGTC 3 cut(s) 217, 889, 1105
ScrFI CCNGG 7 cut(s) 115, 443, 473, 685, 686, 700, 753
SduI GDGCHC 2 cut(s) 692, 1122
SfaNI GCATC 5 cut(s) 54, 945, 979, 1012, 1021
SfcI CTRYAG 1 cut(s) 1221
Sfr303I CCGCGG 1 cut(s) 516
SgrBI CCGCGG 1 cut(s) 516
SinI GGWCC 3 cut(s) 165, 495, 1285
SmaI CCCGGG 1 cut(s) 686
SmiMI CAYNNNNRTG 3 cut(s) 941, 1156, 1175
SmlI CTYRAG 2 cut(s) 1115, 1253
SmoI CTYRAG 2 cut(s) 1115, 1253
SpeI ACTAGT 1 cut(s) 338
SsiI CCGC 6 cut(s) 6, 513, 515, 518, 674, 1275
SspI AATATT 1 cut(s) 1091
SspMI CTAG 5 cut(s) 291, 339, 344, 354, 668
SstI GAGCTC 1 cut(s) 1122
StyD4I CCNGG 7 cut(s) 113, 441, 471, 683, 684, 698, 751
StyI CCWWGG 1 cut(s) 423
TaaI ACNGT 5 cut(s) 90, 906, 943, 1289, 1319
TaiI ACGT 1 cut(s) 852
TaqI TCGA 3 cut(s) 309, 609, 1086
TaqII GACCGA 2 cut(s) 153, 1318
TatI WGTACW 2 cut(s) 713, 768
TauI GCSGC 3 cut(s) 8, 518, 1278
TfiI GAWTC 6 cut(s) 69, 322, 362, 719, 953, 995
Tru1I TTAA 6 cut(s) 101, 198, 860, 924, 969, 1254
Tru9I TTAA 6 cut(s) 101, 198, 860, 924, 969, 1254
TscAI CASTG 1 cut(s) 946
TseI GCWGC 3 cut(s) 235, 671, 1034
TspDTI ATGAA 4 cut(s) 647, 884, 966, 1206
TspGWI ACGGA 1 cut(s) 163
TspMI CCCGGG 1 cut(s) 684
TspRI CASTG 1 cut(s) 946
Van91I CCANNNNNTGG 1 cut(s) 90
Vha464I CTTAAG 1 cut(s) 1253
VpaK11BI GGWCC 3 cut(s) 165, 495, 1285
VspI ATTAAT 1 cut(s) 860
XapI RAATTY 3 cut(s) 455, 757, 1040
XbaI TCTAGA 1 cut(s) 343
XceI RCATGY 1 cut(s) 507
XmaI CCCGGG 1 cut(s) 684
XmiI GTMKAC 1 cut(s) 678
XmnI GAANNNNTTC 1 cut(s) 891
XspI CTAG 5 cut(s) 291, 339, 344, 354, 668
ZrmI AGTACT 1 cut(s) 715
Zsp2I ATGCAT 2 cut(s) 156, 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.